Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002362A_C01 KCC002362A_c01
(507 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC68901.1| glycoprotein gp50 [Pseudorabies virus] 44 0.001
gb|AAO12731.1| glycoprotein D [Pseudorabies virus] 44 0.002
gb|AAC36717.1| glycoprotein gD precursor [Pseudorabies virus] 42 0.006
gb|AAN87891.1| glycoprotein D [Pseudorabies virus] 42 0.006
gb|AAO62939.1| glycoprotein D [Pseudorabies virus] 42 0.006
>gb|AAC68901.1| glycoprotein gp50 [Pseudorabies virus]
Length = 398
Score = 43.9 bits (102), Expect = 0.001
Identities = 36/119 (30%), Positives = 49/119 (40%), Gaps = 1/119 (0%)
Frame = +3
Query: 144 HRQHLRTVPTGTGTATPRGLGCIRSQAAAAGLRPQNCSRCVPSFGTRLSGANSMSEPDTQ 323
+R++ RT P ATP + R A + RP+ + P+ T + + EP T+
Sbjct: 238 YRKNGRTFPRAYAAATPYAIDPARPSAGSPRPRPRPRPKPEPAPATP-APPGRLPEPATR 296
Query: 324 DQGQGGVELPSALRPRSGWDKAAHNPEAVHNPYIDAAAVPSSGYMSPEYQPPRGT-SPG 497
D GG P RP E H P+ A VPS E PPR T +PG
Sbjct: 297 DHAAGGRPTPRPPRP-----------ETPHRPFAPPAVVPSGWPQPAEPFPPRTTAAPG 344
>gb|AAO12731.1| glycoprotein D [Pseudorabies virus]
Length = 400
Score = 43.5 bits (101), Expect = 0.002
Identities = 37/120 (30%), Positives = 49/120 (40%), Gaps = 2/120 (1%)
Frame = +3
Query: 144 HRQHLRTVPTGTGTATPRGLGCIRSQAAAAGLRPQNCSRCVP-SFGTRLSGANSMSEPDT 320
+R++ RT+P ATP + R A + RP+ R P S + + EP T
Sbjct: 238 YRKNGRTLPRAYAAATPYAIDPARPSADSPRPRPRPRPRPKPESAPATPAPPGRLPEPAT 297
Query: 321 QDQGQGGVELPSALRPRSGWDKAAHNPEAVHNPYIDAAAVPSSGYMSPEYQPPRGT-SPG 497
+D GG P RP E H P+ A VPS E PPR T +PG
Sbjct: 298 RDHAAGGRPTPRPPRP-----------ETPHRPFAPPAVVPSGWPQPAEPFPPRTTAAPG 346
>gb|AAC36717.1| glycoprotein gD precursor [Pseudorabies virus]
Length = 404
Score = 41.6 bits (96), Expect = 0.006
Identities = 37/124 (29%), Positives = 49/124 (38%), Gaps = 6/124 (4%)
Frame = +3
Query: 144 HRQHLRTVPTGTGTATPRGLGCIRSQAAAAGLRPQNCSRCVPSFGTRLSGANS-----MS 308
+R++ RT+P ATP + R A + RP+ R P + A +
Sbjct: 238 YRKNGRTLPRAYAAATPYAIDPARPSAGSPRPRPRPRPRPSPRPKPEPAPATPAPPGRLP 297
Query: 309 EPDTQDQGQGGVELPSALRPRSGWDKAAHNPEAVHNPYIDAAAVPSSGYMSPEYQPPRGT 488
EP T+D GG P RP E H P+ A VPS E PPR T
Sbjct: 298 EPATRDHAAGGRPTPRPPRP-----------ETPHRPFAPPAVVPSGWPQPVEPFPPRTT 346
Query: 489 -SPG 497
+PG
Sbjct: 347 AAPG 350
>gb|AAN87891.1| glycoprotein D [Pseudorabies virus]
Length = 400
Score = 41.6 bits (96), Expect = 0.006
Identities = 36/120 (30%), Positives = 46/120 (38%), Gaps = 2/120 (1%)
Frame = +3
Query: 144 HRQHLRTVPTGTGTATPRGLGCIRSQAAAAGLRPQNCSRCVPSFGTRLSGA-NSMSEPDT 320
+R++ RT+P ATP + R A + RP+ R P + EP T
Sbjct: 238 YRKNGRTLPRAYAAATPYAIDPARPSAGSPRPRPRPRPRPKPEPAPATPAPPGRLPEPAT 297
Query: 321 QDQGQGGVELPSALRPRSGWDKAAHNPEAVHNPYIDAAAVPSSGYMSPEYQPPRGT-SPG 497
+D GG P RP E H P A VPS E PPR T +PG
Sbjct: 298 RDHAAGGRPTPRPPRP-----------ETPHRPLAPPAVVPSGWPQPAEPFPPRTTAAPG 346
>gb|AAO62939.1| glycoprotein D [Pseudorabies virus]
Length = 402
Score = 41.6 bits (96), Expect = 0.006
Identities = 36/122 (29%), Positives = 48/122 (38%), Gaps = 4/122 (3%)
Frame = +3
Query: 144 HRQHLRTVPTGTGTATPRGLGCIRSQAAAAGLRPQNCSRCVPS---FGTRLSGANSMSEP 314
+R++ RT+P ATP + R A + RP+ R P + + EP
Sbjct: 238 YRKNGRTLPRAYAAATPYAIDPARPSAGSPRPRPRPRPRPRPKPEPTPATPAPPGRLPEP 297
Query: 315 DTQDQGQGGVELPSALRPRSGWDKAAHNPEAVHNPYIDAAAVPSSGYMSPEYQPPRGT-S 491
T+D GG P RP E H P+ A VPS E PPR T +
Sbjct: 298 ATRDHAAGGRPTPRPPRP-----------ETPHRPFAPPAVVPSGWPQPAEPFPPRTTAA 346
Query: 492 PG 497
PG
Sbjct: 347 PG 348
