Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002348A_C01 KCC002348A_c01
(297 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC37396.1| unnamed protein product [Mus musculus] 42 0.003
pir||T06174 pZE40 protein - barley (fragment) gi|296594|emb|CAA4... 41 0.004
ref|NP_788750.1| La related protein CG14066-PD [Drosophila melan... 41 0.005
ref|NP_733244.2| La related protein CG14066-PC [Drosophila melan... 41 0.005
gb|AAF35862.1|AF221108_1 La related protein [Drosophila melanoga... 41 0.005
>dbj|BAC37396.1| unnamed protein product [Mus musculus]
Length = 221
Score = 41.6 bits (96), Expect = 0.003
Identities = 29/84 (34%), Positives = 38/84 (44%), Gaps = 1/84 (1%)
Frame = -3
Query: 280 RGGRR*AG-WRCRRGGGCRAALAAGRRSPVAGCLTP*VRPPPTAAAPSAQAAPPRRSSAA 104
RGGRR +G W CR AA A +P +P P+ + AQ PPR S+A+
Sbjct: 55 RGGRRASGCWGCRSAPSVPAAAAKPGVAPAHPRASPAAAERPSPGSGRAQPIPPRGSAAS 114
Query: 103 PPPQTSRCRHVWAGSDQPAPSRPP 32
P P + A P +RPP
Sbjct: 115 PKPTSGALTPAAA----PPTARPP 134
>pir||T06174 pZE40 protein - barley (fragment) gi|296594|emb|CAA48592.1| pZE40
[Hordeum vulgare subsp. vulgare]
Length = 129
Score = 41.2 bits (95), Expect = 0.004
Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 22/103 (21%)
Frame = -3
Query: 244 RGGGCRAALAAGRRSPVAGCL--------TP*VRPPP-----------TAAAPSAQAAPP 122
R G C AA A+ +P A +P +RPPP T AP+ P
Sbjct: 7 RKGACLAAAASAGAAPAASAAPAAAGARCSPTLRPPPAPPPWSCPPPPTRGAPAGSRWPA 66
Query: 121 RRSSAAPPPQTS---RCRHVWAGSDQPAPSRPPGLRQQQQQQR 2
R +AA P S R A + +PAP RP G + + ++R
Sbjct: 67 GRPAAATAPPASAAPRAAAPAAAATEPAPGRPAGRGEHEDERR 109
>ref|NP_788750.1| La related protein CG14066-PD [Drosophila melanogaster]
gi|28381480|gb|AAO41606.1| CG14066-PD [Drosophila
melanogaster]
Length = 1442
Score = 40.8 bits (94), Expect = 0.005
Identities = 32/85 (37%), Positives = 37/85 (42%), Gaps = 5/85 (5%)
Frame = +3
Query: 33 GGREGAGWSDPAQTWRQRLV*GGGAADERRGGAACADGAAAVG-GGRTHGVRQ---PATG 200
G R S+ +WR A DE+R GAA GAA G G T G R+ P G
Sbjct: 369 GSRPATATSERVDSWRSSSSTTTAAFDEQRSGAAGGAGAAGTGVGSATRGPRRYRTPYRG 428
Query: 201 DRLPAASAARQPPPR-RQRQPAHLL 272
R +RQ P R R P HLL
Sbjct: 429 GRQGRGGFSRQGPGRPTYRIPRHLL 453
>ref|NP_733244.2| La related protein CG14066-PC [Drosophila melanogaster]
gi|28381481|gb|AAN14138.2| CG14066-PC [Drosophila
melanogaster]
Length = 1403
Score = 40.8 bits (94), Expect = 0.005
Identities = 32/85 (37%), Positives = 37/85 (42%), Gaps = 5/85 (5%)
Frame = +3
Query: 33 GGREGAGWSDPAQTWRQRLV*GGGAADERRGGAACADGAAAVG-GGRTHGVRQ---PATG 200
G R S+ +WR A DE+R GAA GAA G G T G R+ P G
Sbjct: 330 GSRPATATSERVDSWRSSSSTTTAAFDEQRSGAAGGAGAAGTGVGSATRGPRRYRTPYRG 389
Query: 201 DRLPAASAARQPPPR-RQRQPAHLL 272
R +RQ P R R P HLL
Sbjct: 390 GRQGRGGFSRQGPGRPTYRIPRHLL 414
>gb|AAF35862.1|AF221108_1 La related protein [Drosophila melanogaster]
Length = 1403
Score = 40.8 bits (94), Expect = 0.005
Identities = 32/85 (37%), Positives = 37/85 (42%), Gaps = 5/85 (5%)
Frame = +3
Query: 33 GGREGAGWSDPAQTWRQRLV*GGGAADERRGGAACADGAAAVG-GGRTHGVRQ---PATG 200
G R S+ +WR A DE+R GAA GAA G G T G R+ P G
Sbjct: 330 GSRPATATSERVDSWRSSSSTTTAAFDEQRSGAAGGAGAAGTGVGSATRGPRRYRTPYRG 389
Query: 201 DRLPAASAARQPPPR-RQRQPAHLL 272
R +RQ P R R P HLL
Sbjct: 390 GRQGRGGFSRQGPGRPTYRIPRHLL 414
