Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002347A_C01 KCC002347A_c01
(636 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_441311.1| cyanoglobin [Synechocystis sp. PCC 6803] gi|173... 39 0.048
pdb|1MWB|A Chain A, Solution Structure Of The Recombinant Hemogl... 39 0.048
ref|NP_046033.1| ORF H1000 [Halobacterium sp. NRC-1] gi|7484070|... 39 0.063
ref|NP_542614.1| hypothetical protein [Grapevine fleck virus] gi... 39 0.083
ref|NP_058079.1| Ser/Arg-related nuclear matrix protein; plenty-... 38 0.14
>ref|NP_441311.1| cyanoglobin [Synechocystis sp. PCC 6803]
gi|17366375|sp|P73925|GLBN_SYNY3 Cyanoglobin
(Hemoglobin) (Hb) gi|7428635|pir||S75129 cyanoglobin -
Synechocystis sp. (strain PCC 6803)
gi|1653074|dbj|BAA17991.1| cyanoglobin [Synechocystis
sp. PCC 6803]
Length = 124
Score = 39.3 bits (90), Expect = 0.048
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +1
Query: 388 TLLAKLGGNDILKQVAERWYAKLKRDERLGTFLADQDTIHLRARLSAYLANLFG 549
TL KLGG + +++Y ++ +D+R+ F AD D RA A+L FG
Sbjct: 3 TLYEKLGGTTAVDLAVDKFYERVLQDDRIKHFFADVDMAKQRAHQKAFLTYAFG 56
>pdb|1MWB|A Chain A, Solution Structure Of The Recombinant Hemoglobin From The
Cyanobacterium Synechocystis Sp. Pcc 6803 In Its
Hemichrome State
Length = 123
Score = 39.3 bits (90), Expect = 0.048
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +1
Query: 388 TLLAKLGGNDILKQVAERWYAKLKRDERLGTFLADQDTIHLRARLSAYLANLFG 549
TL KLGG + +++Y ++ +D+R+ F AD D RA A+L FG
Sbjct: 2 TLYEKLGGTTAVDLAVDKFYERVLQDDRIKHFFADVDMAKQRAHQKAFLTYAFG 55
>ref|NP_046033.1| ORF H1000 [Halobacterium sp. NRC-1] gi|7484070|pir||T08305
hypothetical protein H1000 [imported] - Halobacterium
sp. (strain NRC-1) plasmid pNRC100
gi|2822366|gb|AAC82872.1| ORF H1000 [Halobacterium sp.
NRC-1]
Length = 110
Score = 38.9 bits (89), Expect = 0.063
Identities = 29/76 (38%), Positives = 33/76 (43%), Gaps = 7/76 (9%)
Frame = +2
Query: 428 RWRSGGMQS---SSATSGLGPSLRTKTP-STCEPG*VPTLPTCSDRSTTPWPRCC---AS 586
RW S S TS P+ T ST P PT + ST P+P CC AS
Sbjct: 6 RWTSSATNCTKISRRTSAATPTTTTSVATSTAHPQAAKRSPTAASSSTAPFPACCTKKAS 65
Query: 587 RPPPKPCSTSAAASCS 634
R P P TS A+CS
Sbjct: 66 RKP--PFRTSILANCS 79
>ref|NP_542614.1| hypothetical protein [Grapevine fleck virus]
gi|18073604|emb|CAC84402.1| hypothetical protein
[Grapevine fleck virus]
Length = 309
Score = 38.5 bits (88), Expect = 0.083
Identities = 28/95 (29%), Positives = 38/95 (39%)
Frame = +2
Query: 350 ARSSETRPPPAMRRCLQNSVETTF*SRWRSGGMQSSSATSGLGPSLRTKTPSTCEPG*VP 529
A S PPPA+R +++ + G +S S PS TP + P P
Sbjct: 56 AGPSTPLPPPALRSSPSSALNAS------RGAPSTSPPPSSSPPSSPASTPPSRTPSPTP 109
Query: 530 TLPTCSDRSTTPWPRCCASRPPPKPCSTSAAASCS 634
T P ST P + PPP +S+AA S
Sbjct: 110 TAPASPVASTAMTPASPSVPPPPSAAPSSSAALSS 144
>ref|NP_058079.1| Ser/Arg-related nuclear matrix protein; plenty-of-prolines-101;
serine/arginine repetitive matrix protein 1 [Mus
musculus] gi|3153821|gb|AAC17422.1|
plenty-of-prolines-101; POP101; SH3-philo-protein [Mus
musculus]
Length = 897
Score = 37.7 bits (86), Expect = 0.14
Identities = 29/94 (30%), Positives = 38/94 (39%), Gaps = 2/94 (2%)
Frame = +2
Query: 341 RSRARSSETRPPPAMRRCLQNSVETTF*SRWRSGGMQSSSATSGLGP--SLRTKTPSTCE 514
R R S + P +R + S RW+S +SS P + R ++PS
Sbjct: 518 RRRLSPSRSASPSPRKRQKETSPRMQMGKRWQSPVTKSSRRRRSPSPPPARRRRSPSPAP 577
Query: 515 PG*VPTLPTCSDRSTTPWPRCCASRPPPKPCSTS 616
P P P RS TP PR PPP+ S S
Sbjct: 578 PPPPPPPPPRRRRSPTPPPRRRTPSPPPRRRSPS 611
