Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002344A_C01 KCC002344A_c01
(498 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD31595.1|AF117898_1 putative hedgehog receptor [Junonia coe... 44 0.001
dbj|BAB78663.1| P0681B11.30 [Oryza sativa (japonica cultivar-gro... 39 0.027
ref|NP_742363.1| alginate regulatory protein AlgP [Pseudomonas p... 39 0.035
ref|XP_195306.1| similar to elongin A3 [Homo sapiens] [Mus muscu... 39 0.046
ref|XP_137079.1| similar to elongin A3 [Homo sapiens] [Mus muscu... 39 0.046
>gb|AAD31595.1|AF117898_1 putative hedgehog receptor [Junonia coenia]
Length = 1318
Score = 43.5 bits (101), Expect = 0.001
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 2/128 (1%)
Frame = +1
Query: 106 VISLLTVSLQKQPI*-PEPQSEPGELAGAQPRRLQRSASRARLSSSRTADSACAPCRPCM 282
V+S+L + + +PI PE S P R S+S SSRT+ SA PC P +
Sbjct: 1097 VLSILGPAAEVRPIEHPERLSTPSPKCSPIHPRKSSSSSGGGDKSSRTSKSAPRPCAPSL 1156
Query: 283 SV*RPRSRPWASGASGTAVRMRAMARAPALQAEAPTRRVA-AARSRARPSASAPGSRPTY 459
+ W S A M+++ P + E T + +A R+ P+ S+ G T
Sbjct: 1157 TTITEEPSSWHSSAHSVQSSMQSIVVQPEVVVETTTYNGSDSASGRSTPTKSSHGGAITT 1216
Query: 460 TSAWRTTS 483
T T +
Sbjct: 1217 TKVTATAN 1224
>dbj|BAB78663.1| P0681B11.30 [Oryza sativa (japonica cultivar-group)]
Length = 834
Score = 39.3 bits (90), Expect = 0.027
Identities = 24/66 (36%), Positives = 33/66 (49%), Gaps = 11/66 (16%)
Frame = +3
Query: 333 SSAHEGDGAGASAAGGG-----------PNSPGGRSAVARTPKRFRPWEQADLHKRLENY 479
SSA AG +A GG P+ SA++ P RPW++ADL +RL +
Sbjct: 179 SSALSIGRAGKAAGAGGRRFGMVRGSRLPSQLAAMSAISPPPP-CRPWDRADLMRRLATF 237
Query: 480 KPLTWF 497
K +TWF
Sbjct: 238 KAMTWF 243
>ref|NP_742363.1| alginate regulatory protein AlgP [Pseudomonas putida KT2440]
gi|24981549|gb|AAN65827.1|AE016211_5 alginate regulatory
protein AlgP [Pseudomonas putida KT2440]
Length = 329
Score = 38.9 bits (89), Expect = 0.035
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Frame = +1
Query: 154 EPQSEPGELAGAQPRRLQRSASRARLSSSRTADSACAPCRPCMSV*RPRSRPWA--SGAS 327
+P ++P A A + + A++A + A A P + +P ++P A + A+
Sbjct: 174 KPAAKPAAKATAAAKPAAKPAAKA----TAAAKPAAKPAAKATAAAKPAAKPAAKATAAA 229
Query: 328 GTAVRMRAMARAPALQAEAPTRRVAAA-RSRARPSASAPGSRP 453
A + A A A A A P + AAA + A+P+A AP ++P
Sbjct: 230 KPAAKPAAKATAAAKPAAKPAAKAAAAAKPAAKPAAKAPAAKP 272
Score = 32.0 bits (71), Expect = 4.3
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Frame = +1
Query: 154 EPQSEPGELAGAQPRRLQRSASRARLSS---SRTADSACAPCRPCM--SV*RPRSRPWAS 318
+P ++P A A + + A++A ++ ++ A A A +P + P ++P A
Sbjct: 216 KPAAKPAAKATAAAKPAAKPAAKATAAAKPAAKPAAKAAAAAKPAAKPAAKAPAAKPAAK 275
Query: 319 GASGTAVRMRAMARAPALQAEAPTRRVAAARSRARPSASAPGS 447
A+ T R A+ A AEA AA + P+A+AP +
Sbjct: 276 PAA-TKAPARTAAKPAAKPAEAKPATPAATTNSVSPAAAAPSA 317
>ref|XP_195306.1| similar to elongin A3 [Homo sapiens] [Mus musculus]
Length = 442
Score = 38.5 bits (88), Expect = 0.046
Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = -1
Query: 480 CSSPGACVSRPAPRGGSAWACARPRCGHPASWGL---RLQRWRPRHRPHAHCCPARAACP 310
C PG AP GS+WAC C P+S + QRW R CPA A P
Sbjct: 158 CQPPGNWEQEEAPGAGSSWACLNGECCSPSSSKCPRGKRQRWESR-------CPAEAQSP 210
>ref|XP_137079.1| similar to elongin A3 [Homo sapiens] [Mus musculus]
Length = 477
Score = 38.5 bits (88), Expect = 0.046
Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = -1
Query: 480 CSSPGACVSRPAPRGGSAWACARPRCGHPASWGL---RLQRWRPRHRPHAHCCPARAACP 310
C PG AP GS+WAC C P+S + QRW P CPA A P
Sbjct: 190 CQPPGNWEQEEAPGAGSSWACLNGECCSPSSSERPRGKRQRWEPP-------CPAEAQSP 242
