Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002337A_C01 KCC002337A_c01
(723 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA35079.1| cgcr-1 product [Chlamydomonas reinhardtii] 46 7e-04
pir||S19114 cgcr-1 protein - Chlamydomonas reinhardtii (fragment) 46 7e-04
ref|XP_346988.1| protein tyrosine phosphatase, receptor type, F ... 45 0.001
ref|ZP_00020794.1| hypothetical protein [Chloroflexus aurantiacus] 31 0.005
ref|ZP_00028124.1| COG0532: Translation initiation factor 2 (IF-... 43 0.006
>emb|CAA35079.1| cgcr-1 product [Chlamydomonas reinhardtii]
Length = 206
Score = 45.8 bits (107), Expect = 7e-04
Identities = 41/134 (30%), Positives = 51/134 (37%), Gaps = 5/134 (3%)
Frame = +1
Query: 49 GGGGGGCWTAAVSSSCRTAWAVATAALCAPAGCWAWAWAPACLMTPLWWPCTRKRAAPVR 228
G G G AA + + A A A A APA A APA L+ P +RAA +
Sbjct: 42 GAAGEGREEAAAAQAAAAAEAAAAEARAAPAVAERTAAAPAKLLQPAAAQAAAERAAAAQ 101
Query: 229 VRKQRRQRKRCGWTLT-----RNTGPAAAAVGVEAPRAAGAAAGAAVKHSTCAAMVAVDA 393
Q + R AAA E AA AAA AA + + A A
Sbjct: 102 AVAQAAAERAAAQAAAQAAAERAAAQAAAQAAAERAAAAQAAAQAAAERAAAERAAAAQA 161
Query: 394 FEAMGACALASIAR 435
A A A++AR
Sbjct: 162 AAERAAAAHAAVAR 175
Score = 38.1 bits (87), Expect = 0.14
Identities = 43/131 (32%), Positives = 53/131 (39%), Gaps = 5/131 (3%)
Frame = -2
Query: 443 GRQRAIEARAQAPIASNASTATIAAQVECLTAAPAAA---PAARGASTPTAAAAGPVLRV 273
GR+ A A+A A + A+ A A V TAA A PAA A+ AAAA V
Sbjct: 47 GREEAAAAQAAAAAEAAAAEARAAPAVAERTAAAPAKLLQPAAAQAAAERAAAAQAV--- 103
Query: 272 RVQPHLFRCRRCFLTRTGAARLRVHGHQRGVIKQAGAQAHAQQPAGAHSAAVATAQAV-- 99
+ A R + ++A AQA AQ A +AA A AQA
Sbjct: 104 --------------AQAAAERAAAQAAAQAAAERAAAQAAAQAAAERAAAAQAAAQAAAE 149
Query: 98 RQLDETAAVQQ 66
R E AA Q
Sbjct: 150 RAAAERAAAAQ 160
Score = 32.0 bits (71), Expect = 9.9
Identities = 35/124 (28%), Positives = 44/124 (35%), Gaps = 6/124 (4%)
Frame = -2
Query: 431 AIEARAQAPIASNASTATI------AAQVECLTAAPAAAPAARGASTPTAAAAGPVLRVR 270
A EARA +A + A AAQ AA A A A A A AA R
Sbjct: 64 AAEARAAPAVAERTAAAPAKLLQPAAAQAAAERAAAAQAVAQAAAERAAAQAAAQAAAER 123
Query: 269 VQPHLFRCRRCFLTRTGAARLRVHGHQRGVIKQAGAQAHAQQPAGAHSAAVATAQAVRQL 90
A + + + A AQA A++ A AH AAVA +
Sbjct: 124 AAAQAAAQAAAERAAAAQAAAQAAAERAAAERAAAAQAAAERAAAAH-AAVARLRRTGCR 182
Query: 89 DETA 78
DE +
Sbjct: 183 DEAS 186
>pir||S19114 cgcr-1 protein - Chlamydomonas reinhardtii (fragment)
Length = 205
Score = 45.8 bits (107), Expect = 7e-04
Identities = 41/134 (30%), Positives = 51/134 (37%), Gaps = 5/134 (3%)
Frame = +1
Query: 49 GGGGGGCWTAAVSSSCRTAWAVATAALCAPAGCWAWAWAPACLMTPLWWPCTRKRAAPVR 228
G G G AA + + A A A A APA A APA L+ P +RAA +
Sbjct: 42 GAAGEGREEAAAAQAAAAAEAAAAEARAAPAVAERTAAAPAKLLQPAAAQAAAERAAAAQ 101
Query: 229 VRKQRRQRKRCGWTLT-----RNTGPAAAAVGVEAPRAAGAAAGAAVKHSTCAAMVAVDA 393
Q + R AAA E AA AAA AA + + A A
Sbjct: 102 AVAQAAAERAAAQAAAQAAAERAAAQAAAQAAAERAAAAQAAAQAAAERAAAERAAAAQA 161
Query: 394 FEAMGACALASIAR 435
A A A++AR
Sbjct: 162 AAERAAAAHAAVAR 175
Score = 38.1 bits (87), Expect = 0.14
Identities = 43/131 (32%), Positives = 53/131 (39%), Gaps = 5/131 (3%)
Frame = -2
Query: 443 GRQRAIEARAQAPIASNASTATIAAQVECLTAAPAAA---PAARGASTPTAAAAGPVLRV 273
GR+ A A+A A + A+ A A V TAA A PAA A+ AAAA V
Sbjct: 47 GREEAAAAQAAAAAEAAAAEARAAPAVAERTAAAPAKLLQPAAAQAAAERAAAAQAV--- 103
Query: 272 RVQPHLFRCRRCFLTRTGAARLRVHGHQRGVIKQAGAQAHAQQPAGAHSAAVATAQAV-- 99
+ A R + ++A AQA AQ A +AA A AQA
Sbjct: 104 --------------AQAAAERAAAQAAAQAAAERAAAQAAAQAAAERAAAAQAAAQAAAE 149
Query: 98 RQLDETAAVQQ 66
R E AA Q
Sbjct: 150 RAAAERAAAAQ 160
Score = 32.0 bits (71), Expect = 9.9
Identities = 35/124 (28%), Positives = 44/124 (35%), Gaps = 6/124 (4%)
Frame = -2
Query: 431 AIEARAQAPIASNASTATI------AAQVECLTAAPAAAPAARGASTPTAAAAGPVLRVR 270
A EARA +A + A AAQ AA A A A A A AA R
Sbjct: 64 AAEARAAPAVAERTAAAPAKLLQPAAAQAAAERAAAAQAVAQAAAERAAAQAAAQAAAER 123
Query: 269 VQPHLFRCRRCFLTRTGAARLRVHGHQRGVIKQAGAQAHAQQPAGAHSAAVATAQAVRQL 90
A + + + A AQA A++ A AH AAVA +
Sbjct: 124 AAAQAAAQAAAERAAAAQAAAQAAAERAAAERAAAAQAAAERAAAAH-AAVARLRRTGCR 182
Query: 89 DETA 78
DE +
Sbjct: 183 DEAS 186
>ref|XP_346988.1| protein tyrosine phosphatase, receptor type, F [Rattus norvegicus]
Length = 197
Score = 44.7 bits (104), Expect = 0.001
Identities = 44/122 (36%), Positives = 51/122 (41%), Gaps = 2/122 (1%)
Frame = -2
Query: 437 QRAIEARAQAPIASNASTATIAAQVECLTAAPAAAPAARGASTPTAAAAGPVLRVRVQPH 258
Q A++A A A A+ A TA AA AA AAA AA GA+ TAAAAG
Sbjct: 5 QLAVQAAAGA--AAPAGTAA-AAAAAAAAAAAAAAAAATGAAATTAAAAGAAAAAAAATT 61
Query: 257 LFRCRRCFLTRT--GAARLRVHGHQRGVIKQAGAQAHAQQPAGAHSAAVATAQAVRQLDE 84
T AA G AGA A A+ AGA +AA A A A +
Sbjct: 62 AAAAAAAGAAATAGAAAAAAAAGAAATAAAAAGAAATAEAAAGAAAAAAAAAGAAEASEA 121
Query: 83 TA 78
A
Sbjct: 122 AA 123
Score = 41.6 bits (96), Expect = 0.013
Identities = 41/120 (34%), Positives = 46/120 (38%)
Frame = -2
Query: 431 AIEARAQAPIASNASTATIAAQVECLTAAPAAAPAARGASTPTAAAAGPVLRVRVQPHLF 252
A A A A+ A+ A AA E A AAA AA GA+ + AAAG
Sbjct: 77 AAAAAAAGAAATAAAAAGAAATAEAAAGAAAAAAAAAGAAEASEAAAGAAAAAAAA---- 132
Query: 251 RCRRCFLTRTGAARLRVHGHQRGVIKQAGAQAHAQQPAGAHSAAVATAQAVRQLDETAAV 72
T T AA G AGA AGA +AA A A A TAAV
Sbjct: 133 -AAAAGATATAAAAA---GAASAAAAAAGAAEAPAAAAGAAAAAAAAAAAAAAAAATAAV 188
Score = 38.1 bits (87), Expect = 0.14
Identities = 37/112 (33%), Positives = 40/112 (35%), Gaps = 2/112 (1%)
Frame = -2
Query: 431 AIEARAQAPIASNASTATIAAQVECLTAAPAAAPAARGASTPTAAAAGPVLRVRVQPHLF 252
A A A A A+ + A AA TA AAA AA GA+ AAAAG
Sbjct: 47 AAAAGAAAAAAAATTAAAAAAAGAAATAGAAAAAAAAGAAATAAAAAGAAATAEAAAGAA 106
Query: 251 RCRRCF--LTRTGAARLRVHGHQRGVIKQAGAQAHAQQPAGAHSAAVATAQA 102
A AGA A A AGA SAA A A A
Sbjct: 107 AAAAAAAGAAEASEAAAGAAAAAAAAAAAAGATATAAAAAGAASAAAAAAGA 158
Score = 35.8 bits (81), Expect = 0.69
Identities = 39/126 (30%), Positives = 45/126 (34%), Gaps = 1/126 (0%)
Frame = +1
Query: 58 GGGCWTAAVSSSCRTAWAVATAALCAPAGCWAWAWAPACLMTPLWWPCTRKRAAPVRVRK 237
G TAA + + A A TAA A AG A A A A AA
Sbjct: 41 GAAATTAAAAGAAAAAAAATTAAAAAAAGAAATAGAAAA-------------AAAAGAAA 87
Query: 238 QRRQRKRCGWTLTRNTGPAAAAVGVE-APRAAGAAAGAAVKHSTCAAMVAVDAFEAMGAC 414
T G AAAA A A+ AAAGAA + AA A A A
Sbjct: 88 TAAAAAGAAATAEAAAGAAAAAAAAAGAAEASEAAAGAAAAAAAAAAAAGATATAAAAAG 147
Query: 415 ALASIA 432
A ++ A
Sbjct: 148 AASAAA 153
Score = 35.4 bits (80), Expect = 0.90
Identities = 39/126 (30%), Positives = 45/126 (34%), Gaps = 7/126 (5%)
Frame = +1
Query: 61 GGCWTAAVSSSCRTAWAVATAALCAPAGCWAWAWA-PACLMTPLWWPCTRKRAAPVRVRK 237
G TA +++ A A ATAA A A A A A A AA
Sbjct: 69 GAAATAGAAAAAAAAGAAATAAAAAGAAATAEAAAGAAAAAAAAAGAAEASEAAAGAAAA 128
Query: 238 QRRQRKRCGWTLTRN------TGPAAAAVGVEAPRAAGAAAGAAVKHSTCAAMVAVDAFE 399
G T T + AAAA EAP AA AA AA + AA A A
Sbjct: 129 AAAAAAAAGATATAAAAAGAASAAAAAAGAAEAPAAAAGAAAAAAAAAAAAAAAAATAAV 188
Query: 400 AMGACA 417
GA +
Sbjct: 189 PAGAAS 194
Score = 32.3 bits (72), Expect = 7.6
Identities = 36/114 (31%), Positives = 41/114 (35%), Gaps = 2/114 (1%)
Frame = -2
Query: 443 GRQRAIEARAQAPIASNASTATIAAQVECLTAAPAAA--PAARGASTPTAAAAGPVLRVR 270
G EA A A A+ A+ A AA AAA AA GA+ AAAAG
Sbjct: 94 GAAATAEAAAGAAAAAAAAAGAAEASEAAAGAAAAAAAAAAAAGATATAAAAAG------ 147
Query: 269 VQPHLFRCRRCFLTRTGAARLRVHGHQRGVIKQAGAQAHAQQPAGAHSAAVATA 108
+A G AGA A A A A +AA ATA
Sbjct: 148 ---------------AASAAAAAAGAAEAPAAAAGAAAAAAAAAAAAAAAAATA 186
>ref|ZP_00020794.1| hypothetical protein [Chloroflexus aurantiacus]
Length = 344
Score = 30.8 bits (68), Expect(3) = 0.005
Identities = 14/30 (46%), Positives = 15/30 (49%)
Frame = -3
Query: 199 TATREASSNRLEPRPMPSSPPAHTAPPSPP 110
TA+ AS P P P PP APP PP
Sbjct: 278 TASATASPTEPPPPPPPPPPPPTVAPPPPP 307
Score = 27.3 bits (59), Expect(3) = 0.005
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -2
Query: 404 IASNASTATIAAQVECLTAAPAAAPAARGASTPTAAA 294
+ + +T+ A+ TA+P A+P A ++PTA+A
Sbjct: 245 VTPSPTTSPTASPTASPTASPTASPTASPTASPTASA 281
Score = 25.0 bits (53), Expect(3) = 1.4
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -2
Query: 410 APIASNASTATIAAQVECLTAAPAAAPAARGASTPTAAAAGP 285
+P AS ++ T A+ TA+P A+P A ++PT P
Sbjct: 252 SPTASPTASPT-ASPTASPTASPTASPTASATASPTEPPPPP 292
Score = 24.6 bits (52), Expect(3) = 1.4
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = -3
Query: 163 PRPMPSSPPAHTAPPSPPP 107
P P + PP PP PPP
Sbjct: 305 PPPTVAPPPPPPPPPPPPP 323
Score = 22.7 bits (47), Expect(3) = 0.005
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 83 TAAVQQPPPPPP 48
T A PPPPPP
Sbjct: 308 TVAPPPPPPPPP 319
Score = 22.3 bits (46), Expect(3) = 1.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 65 PPPPPPRG 42
PPPPPP G
Sbjct: 321 PPPPPPPG 328
>ref|ZP_00028124.1| COG0532: Translation initiation factor 2 (IF-2; GTPase)
[Burkholderia fungorum]
Length = 989
Score = 42.7 bits (99), Expect = 0.006
Identities = 42/135 (31%), Positives = 59/135 (43%), Gaps = 5/135 (3%)
Frame = -2
Query: 440 RQRAIEARAQAPIASNASTATIAAQVECLTAAPAAAPAARGASTPTAAAAGPVLRVRVQP 261
R+RA E A+ A+ A A Q + A AA PAA A A AA PV+ + +
Sbjct: 169 RRRAEEEAAKKRAAAAAEAAAREQQTQASKPAQAAQPAAAKAEPVAAKAAEPVVARQSEQ 228
Query: 260 HLFRCRRCFLTRTGAARLRVHGHQRGVIKQAGAQAHAQQP--AGAHSAAVATAQAVRQLD 87
R AA+ +QA +A A+Q A +AA A A+A+R++
Sbjct: 229 DDERA-----AAERAAQREAAKKAEDAARQAAEKARAEQEEIAKRRAAAEAEARAIREMM 283
Query: 86 ET---AAVQQPPPPP 51
T A V+ P P P
Sbjct: 284 NTPRKAQVKAPEPAP 298
