Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002314A_C01 KCC002314A_c01
(489 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_596893.1| nucleosome assembly protein 1-like 3 [Rattus no... 39 0.034
ref|NP_620081.1| nucleosome assembly protein 1-like 3; nucleosom... 38 0.058
ref|NP_295856.1| conserved hypothetical protein [Deinococcus rad... 36 0.29
ref|XP_303900.1| hypothetical protein XP_303900 [Homo sapiens] 36 0.29
dbj|BAA96095.1| gH2B [Lilium longiflorum] 35 0.64
>ref|NP_596893.1| nucleosome assembly protein 1-like 3 [Rattus norvegicus]
gi|15076711|dbj|BAB62331.1| nucleosome assembly protein
1-like 3 [Rattus norvegicus]
Length = 536
Score = 38.9 bits (89), Expect = 0.034
Identities = 24/76 (31%), Positives = 36/76 (46%)
Frame = +3
Query: 252 EGRSEEAFCRTMCERGPTIESNHSRGAGSAGMVLAAPRPGAMAVISHADPDAGNSTSSSS 431
+G +EEA + C+ G +SN S S G ++ S + + +S+SSS
Sbjct: 15 QGVAEEAMASSACDSGDESDSNSSSSTTSCGSTGSSS--------SSSSSSSSSSSSSSG 66
Query: 432 SGGASDVSDDLHQPKR 479
S G+S LHQ KR
Sbjct: 67 SSGSSSNGSHLHQKKR 82
>ref|NP_620081.1| nucleosome assembly protein 1-like 3; nucleosome assembly protein 1
- like 3 [Mus musculus] gi|2826166|dbj|BAA24570.1| MB20
[Mus sp.] gi|18044061|gb|AAH20176.1| Nucleosome assembly
protein 1-like 3 [Mus musculus]
gi|20071940|gb|AAH27045.1| Nucleosome assembly protein
1-like 3 [Mus musculus]
Length = 544
Score = 38.1 bits (87), Expect = 0.058
Identities = 22/75 (29%), Positives = 36/75 (47%)
Frame = +3
Query: 255 GRSEEAFCRTMCERGPTIESNHSRGAGSAGMVLAAPRPGAMAVISHADPDAGNSTSSSSS 434
G +EEA T C+ G +SN S S ++ + + S + + +S+SSS S
Sbjct: 16 GVAEEAMASTACDSGDESDSNSSSSTNSCSSSGSSSSGSSSSSSSSSSSSSSSSSSSSGS 75
Query: 435 GGASDVSDDLHQPKR 479
G+S L++ KR
Sbjct: 76 SGSSSNGSHLNRKKR 90
>ref|NP_295856.1| conserved hypothetical protein [Deinococcus radiodurans]
gi|7471338|pir||B75310 conserved hypothetical protein -
Deinococcus radiodurans (strain R1)
gi|6459930|gb|AAF11681.1|AE002048_1 conserved
hypothetical protein [Deinococcus radiodurans]
Length = 528
Score = 35.8 bits (81), Expect = 0.29
Identities = 18/42 (42%), Positives = 20/42 (46%)
Frame = -1
Query: 354 PEPCQRCQRRGYDYSL*WVRARTSCGRTPPRCGPQSDERRPA 229
P C+R +R R T CGRT PRCGP S R A
Sbjct: 398 PRRCRRATKR--------CRTATGCGRTSPRCGPSSGSCRAA 431
>ref|XP_303900.1| hypothetical protein XP_303900 [Homo sapiens]
Length = 136
Score = 35.8 bits (81), Expect = 0.29
Identities = 33/102 (32%), Positives = 46/102 (44%), Gaps = 13/102 (12%)
Frame = -1
Query: 468 GAGRRSRRWRRRCYCWRCCYPHLGQHVKLPP*LRAAAPPEPCQRCQRRGYDY-SL*WVRA 292
GA ++RR R C R C H + + PP A P PC RC R+ + + L W +
Sbjct: 32 GAPGQARRRPRGPRCSRGC-DHKPRRSRGPP----RAQPPPCARCCRQPWRFRHLAWPWS 86
Query: 291 RTSCGRTP--------PR----CGPQSDERRPARPSGETRTK 202
+ R P PR GP++ RR RP G TR++
Sbjct: 87 WGNSPRAPGAPTLLCAPRSSCQAGPEAGARRVERPLGTTRSQ 128
>dbj|BAA96095.1| gH2B [Lilium longiflorum]
Length = 158
Score = 34.7 bits (78), Expect = 0.64
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = -2
Query: 365 PRRRQNHASAASAAAMITLYSGSALAHRAAERLLAAALKVMKGGRRAPLVKH 210
PRR++ A+AA+AAA +G A A + + + K KG ++ PL+K+
Sbjct: 3 PRRKKKAAAAAAAAAAAAAAAGKAAAGKDGKAGIMTPKKPKKGKKKIPLMKY 54
