Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002296A_C01 KCC002296A_c01
(419 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_182247.1| RNA helicase, putative [Arabidopsis thaliana] g... 64 4e-10
ref|NP_609946.1| CG10689-PA [Drosophila melanogaster] gi|7298547... 63 1e-09
ref|NP_081263.1| DEAH (Asp-Glu-Ala-His) box polypeptide 16; DEAD... 62 1e-09
dbj|BAC65596.3| mKIAA0577 protein [Mus musculus] 62 1e-09
ref|XP_331320.1| hypothetical protein [Neurospora crassa] gi|289... 62 2e-09
>ref|NP_182247.1| RNA helicase, putative [Arabidopsis thaliana]
gi|3913425|sp|O22899|DD15_ARATH Putative pre-mRNA
splicing factor ATP-dependent RNA helicase
gi|25409033|pir||H84912 probable pre-mRNA splicing
factor RNA helicase [imported] - Arabidopsis thaliana
gi|2275203|gb|AAB63825.1| putative pre-mRNA splicing
factor RNA helicase [Arabidopsis thaliana]
gi|22135845|gb|AAM91108.1| At2g47250/T8I13.9
[Arabidopsis thaliana] gi|28416499|gb|AAO42780.1|
At2g47250/T8I13.9 [Arabidopsis thaliana]
Length = 729
Score = 64.3 bits (155), Expect = 4e-10
Identities = 33/65 (50%), Positives = 42/65 (63%)
Frame = +2
Query: 200 NDAAAAERRRRIDAERRQLPAWAARDKLLALLQQHRTLVLVGETGSGKTTQIPQFLLAAK 379
N A ++R I +RR LP W +D L L ++TL+LVGETGSGKTTQIPQF+L A
Sbjct: 47 NGKAYSQRYFEILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAV 106
Query: 380 FGKSS 394
+S
Sbjct: 107 VADNS 111
>ref|NP_609946.1| CG10689-PA [Drosophila melanogaster] gi|7298547|gb|AAF53766.1|
CG10689-PA [Drosophila melanogaster]
gi|16769318|gb|AAL28878.1| LD25692p [Drosophila
melanogaster]
Length = 894
Score = 62.8 bits (151), Expect = 1e-09
Identities = 29/66 (43%), Positives = 46/66 (68%), Gaps = 1/66 (1%)
Frame = +2
Query: 194 RENDAAAAERRR-RIDAERRQLPAWAARDKLLALLQQHRTLVLVGETGSGKTTQIPQFLL 370
R+ + ER+R +D RR LP + ++ L+A +++H+ L++ GETGSGKTTQ+PQ+L+
Sbjct: 231 RQPELTEKERKRLTLDETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLV 290
Query: 371 AAKFGK 388
A F K
Sbjct: 291 EAGFTK 296
>ref|NP_081263.1| DEAH (Asp-Glu-Ala-His) box polypeptide 16; DEAD/H
(Asp-Glu-Ala-Asp/His) box polypeptide 16 [Mus musculus]
gi|14318701|gb|AAH09147.1| DEAH (Asp-Glu-Ala-His) box
polypeptide 16 [Mus musculus]
Length = 1044
Score = 62.4 bits (150), Expect = 1e-09
Identities = 29/61 (47%), Positives = 42/61 (68%)
Frame = +2
Query: 206 AAAAERRRRIDAERRQLPAWAARDKLLALLQQHRTLVLVGETGSGKTTQIPQFLLAAKFG 385
+A A+++ I A RR LP + R++LLA + H+ L++ GETGSGKTTQIPQ+L +
Sbjct: 386 SAQAQQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYT 445
Query: 386 K 388
K
Sbjct: 446 K 446
>dbj|BAC65596.3| mKIAA0577 protein [Mus musculus]
Length = 629
Score = 62.4 bits (150), Expect = 1e-09
Identities = 29/61 (47%), Positives = 42/61 (68%)
Frame = +2
Query: 206 AAAAERRRRIDAERRQLPAWAARDKLLALLQQHRTLVLVGETGSGKTTQIPQFLLAAKFG 385
+A A+++ I A RR LP + R++LLA + H+ L++ GETGSGKTTQIPQ+L +
Sbjct: 418 SAQAQQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYT 477
Query: 386 K 388
K
Sbjct: 478 K 478
>ref|XP_331320.1| hypothetical protein [Neurospora crassa] gi|28922320|gb|EAA31559.1|
hypothetical protein [Neurospora crassa]
gi|28950131|emb|CAD70989.1| probable pre-mRNA splicing
protein PRP2 [Neurospora crassa]
Length = 917
Score = 61.6 bits (148), Expect = 2e-09
Identities = 31/66 (46%), Positives = 43/66 (64%)
Frame = +2
Query: 185 RELRENDAAAAERRRRIDAERRQLPAWAARDKLLALLQQHRTLVLVGETGSGKTTQIPQF 364
R L+E AA + I R+ LP +A RD L +++++ L+LVGETGSGKTTQIPQ+
Sbjct: 248 RILKEKIEAAERAAKSIQEVRKSLPVYAYRDAFLDAIKEYQVLILVGETGSGKTTQIPQY 307
Query: 365 LLAAKF 382
L A +
Sbjct: 308 LHEAGY 313
