Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002276A_C01 KCC002276A_c01
(471 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_004463.1| forkhead box D1; forkhead (Drosophila)-like 8; ... 39 0.030
dbj|BAC37396.1| unnamed protein product [Mus musculus] 36 0.26
ref|ZP_00043112.1| COG2877: 3-deoxy-D-manno-octulosonic acid (KD... 35 0.34
dbj|BAB27856.1| unnamed protein product [Mus musculus] 35 0.34
ref|NP_250141.1| conserved hypothetical protein [Pseudomonas aer... 35 0.57
>ref|NP_004463.1| forkhead box D1; forkhead (Drosophila)-like 8; Forkhead,
drosophila, homolog-like 8; forkhead-related activator 4
[Homo sapiens] gi|2494490|sp|Q16676|FXD1_HUMAN FORKHEAD
BOX PROTEIN D1 (FORKHEAD-RELATED PROTEIN FKHL8)
(FORKHEAD-RELATED TRANSCRIPTION FACTOR 4) (FREAC-4)
gi|7512440|pir||G02738 FREAC-4 - human
gi|1399237|gb|AAC50660.1| forkhead related activator 4
gi|1399239|gb|AAC50661.1| FREAC-4
Length = 465
Score = 38.9 bits (89), Expect = 0.030
Identities = 29/79 (36%), Positives = 33/79 (41%)
Frame = -3
Query: 469 PRPRAAAAPVPAPPMLLRAEMPGIQQPSCIASLSTVCP*HRRSPLSIECRPSG*AGRAGS 290
P P AA P P P +A PG S +A RSP SIE G G A +
Sbjct: 331 PHPLGAALPGPLPASAAKAGGPGA---SALA----------RSPFSIESIIGGSLGPAAA 377
Query: 289 ARAAAGGPGTQSCSPKPTP 233
A AAA SP P+P
Sbjct: 378 AAAAAQAAAAAQASPSPSP 396
>dbj|BAC37396.1| unnamed protein product [Mus musculus]
Length = 221
Score = 35.8 bits (81), Expect = 0.26
Identities = 29/88 (32%), Positives = 34/88 (37%), Gaps = 9/88 (10%)
Frame = -3
Query: 469 PRPRAAAAPVPAPPMLLRAEMPGIQQPSCIASLSTVCP*HRRSPLSIECRPSG*AGRAGS 290
P +AA+P P L A P +P S+ CP R PLS SG R S
Sbjct: 107 PPRGSAASPKPTSGALTPAAAPPTARPPAALPASSACPEPRPPPLSSPSPRSG--ARELS 164
Query: 289 AR---------AAAGGPGTQSCSPKPTP 233
AR A G G P+PTP
Sbjct: 165 ARPRGTPPHFSGAFGSSGAARAGPRPTP 192
>ref|ZP_00043112.1| COG2877: 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate
synthase [Magnetococcus sp. MC-1]
Length = 287
Score = 35.4 bits (80), Expect = 0.34
Identities = 18/59 (30%), Positives = 28/59 (46%), Gaps = 9/59 (15%)
Frame = -2
Query: 272 RSGHSVVFAKTHT---------ASSASEVLMTDCVDAAPAISVCATMFELHPEPNRKVC 123
+SG+ V+F TH+ AS ++D AA A+ V E+HP+P+ C
Sbjct: 189 QSGYPVIFDATHSVQQPGALGGASGGDRRFVSDLARAAVAVGVAGVFMEVHPDPDHAPC 247
>dbj|BAB27856.1| unnamed protein product [Mus musculus]
Length = 200
Score = 35.4 bits (80), Expect = 0.34
Identities = 29/82 (35%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Frame = -3
Query: 469 PRPRAAAAPV--PAPPMLLRAEMPG-IQQPSCIASLSTVCP*HRRSPLSIECRPSG*AGR 299
P R AAPV P PP +RA +PG P + + P S P G R
Sbjct: 28 PPARLPAAPVSSPRPPSSVRAAVPGSASHPGTLRPQAFSVPDGAASGHGAV--PGGARRR 85
Query: 298 AGSARAAAGGPGTQSCSPKPTP 233
AG R AA GP +P P P
Sbjct: 86 AGDERGAAPGPAPSDDAPLPGP 107
>ref|NP_250141.1| conserved hypothetical protein [Pseudomonas aeruginosa PA01]
gi|11347785|pir||D83465 conserved hypothetical protein
PA1450 [imported] - Pseudomonas aeruginosa (strain PAO1)
gi|9947401|gb|AAG04839.1|AE004574_10 conserved
hypothetical protein [Pseudomonas aeruginosa PAO1]
Length = 419
Score = 34.7 bits (78), Expect = 0.57
Identities = 33/107 (30%), Positives = 42/107 (38%), Gaps = 8/107 (7%)
Frame = +1
Query: 172 TLIAGAASTQSVISTSEADDAVWVLANTTECPDLQPRL-------WPNLLG-LLTRWAYI 327
TL A A+S +S + W L L L WP LLG L W
Sbjct: 174 TLPAAASSGAPKVSLGQLPAEAWALLVAFIYGSLAGVLLSARALRWPWLLGGALLCWLLG 233
Query: 328 QSRGASADARDTQLIGSLCSLVAGFLASRPGAAWAVRAPALLLLAVV 468
GAS + L+ LC LV G + GA W VR L++ V+
Sbjct: 234 TLAGASGEWMSVLLVAPLCMLVGG---ATFGALWTVRPAFYLVIGVL 277
