KCC002268A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002268A_C01 KCC002268A_c01
ctaCAACCCTAAACACTAGAGTTGGAGAGCAAGCTACGCATCCCGCGTCCTAAGGCCAGG
CGGCATATACACTAGTTGGGTCCGTCTGCGACGACGATGACAGACCCGAAGGGGCAAGAC
CTGGACGCTGAAAAGCAACATGCAGCTACGTTACATAACGCCGAAGACACTCTGTGCTCA
GCGGTCCAGGATGAGACGGCCGAGGACTTGCGGCCCCGGAACGTCATCGTTCGGTTCTTC
CAGTTCTTGGCGAGCTTTATGATCCCCGGTCTGGGCATGTTCTGCGAGGCCTACTTCGTC
TTCGCCGTCGGTAACCTGTCAGCGCTGTGGAAGGTCGAGTACAAGAACTGCTGGAAGGGA
ATCGGCTGCCCGGTCAAGCTTTCTGAATCAATTACCTACACGCAAGTGTGCGGCATCATC
TTTGGCCAGCTGTTCCTGGGCTTCTTCGCTGACCGCATCGGCCGCAAATGGGGCAGTGTC
GCCACCGCCGGCACCATGGTCGTTGGTGCCATCCTGATTATCTCCTCTGCCGGACCCACC
GAG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002268A_C01 KCC002268A_c01
         (543 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAB96536.1| Pi-transporter homologue A-3 [Chlamydomonas rein...   306  9e-83
dbj|BAB96535.1| Pi-transporter homologue A-2 [Chlamydomonas rein...   207  9e-53
dbj|BAB96534.1| Pi-transporter homologue A-1 [Chlamydomonas rein...   181  4e-45
ref|XP_327661.1| hypothetical protein [Neurospora crassa] gi|289...    76  3e-13
gb|AAD38859.1|AF156695_1 inorganic phosphate transporter [Solanu...    49  6e-05

>dbj|BAB96536.1| Pi-transporter homologue A-3 [Chlamydomonas reinhardtii]
          Length = 573

 Score =  306 bits (785), Expect = 9e-83
 Identities = 149/149 (100%), Positives = 149/149 (100%)
 Frame = +1

Query: 97  MTDPKGQDLDAEKQHAATLHNAEDTLCSAVQDETAEDLRPRNVIVRFFQFLASFMIPGLG 276
           MTDPKGQDLDAEKQHAATLHNAEDTLCSAVQDETAEDLRPRNVIVRFFQFLASFMIPGLG
Sbjct: 1   MTDPKGQDLDAEKQHAATLHNAEDTLCSAVQDETAEDLRPRNVIVRFFQFLASFMIPGLG 60

Query: 277 MFCEAYFVFAVGNLSALWKVEYKNCWKGIGCPVKLSESITYTQVCGIIFGQLFLGFFADR 456
           MFCEAYFVFAVGNLSALWKVEYKNCWKGIGCPVKLSESITYTQVCGIIFGQLFLGFFADR
Sbjct: 61  MFCEAYFVFAVGNLSALWKVEYKNCWKGIGCPVKLSESITYTQVCGIIFGQLFLGFFADR 120

Query: 457 IGRKWGSVATAGTMVVGAILIISSAGPTE 543
           IGRKWGSVATAGTMVVGAILIISSAGPTE
Sbjct: 121 IGRKWGSVATAGTMVVGAILIISSAGPTE 149

>dbj|BAB96535.1| Pi-transporter homologue A-2 [Chlamydomonas reinhardtii]
          Length = 545

 Score =  207 bits (526), Expect = 9e-53
 Identities = 100/104 (96%), Positives = 100/104 (96%)
 Frame = +1

Query: 232 RFFQFLASFMIPGLGMFCEAYFVFAVGNLSALWKVEYKNCWKGIGCPVKLSESITYTQVC 411
           RFF FLASFMIPGLGMFCEAYFVFAVGNLSALWKVEYKNCWKGIGCPVKLSESITYTQVC
Sbjct: 13  RFFLFLASFMIPGLGMFCEAYFVFAVGNLSALWKVEYKNCWKGIGCPVKLSESITYTQVC 72

Query: 412 GIIFGQLFLGFFADRIGRKWGSVATAGTMVVGAILIISSAGPTE 543
           GIIFGQLFLGFFADRIGRKWGSV TA TMVVGAILIISSAG TE
Sbjct: 73  GIIFGQLFLGFFADRIGRKWGSVTTAATMVVGAILIISSAGNTE 116

>dbj|BAB96534.1| Pi-transporter homologue A-1 [Chlamydomonas reinhardtii]
          Length = 560

 Score =  181 bits (460), Expect = 4e-45
 Identities = 93/150 (62%), Positives = 107/150 (71%), Gaps = 1/150 (0%)
 Frame = +1

Query: 97  MTDPKGQDLDAEKQHAATLHNAEDTLCSAVQDETAEDLRPRNVIVRFFQFLASFMIPGLG 276
           M  P     D EK     L NAE TL +  ++E      P   + R   F+ +FM+PGLG
Sbjct: 1   MATPPQNTADPEKTQLQKLQNAEVTLLTMEKEEVVVYHNP---LWRCLHFMGAFMLPGLG 57

Query: 277 MFCEAYFVFAVGNLSALWKVEYKNCWKG-IGCPVKLSESITYTQVCGIIFGQLFLGFFAD 453
           MFCEAYFVFAVGNLSA+WK EY +CW     CP KLS+SITYTQVCGIIFGQL LGFFAD
Sbjct: 58  MFCEAYFVFAVGNLSAVWKAEYPDCWATHTTCPKKLSDSITYTQVCGIIFGQLVLGFFAD 117

Query: 454 RIGRKWGSVATAGTMVVGAILIISSAGPTE 543
           RIGRKWGSV+TA TMVVG ILI++SAGPT+
Sbjct: 118 RIGRKWGSVSTAATMVVGGILIVASAGPTD 147

>ref|XP_327661.1| hypothetical protein [Neurospora crassa] gi|28920257|gb|EAA29632.1|
           hypothetical protein [Neurospora crassa]
          Length = 693

 Score = 75.9 bits (185), Expect = 3e-13
 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
 Frame = +1

Query: 244 FLASFMIPGLGMFCEAYFVFAVGNLSALWKVEYKNCW--KGIGCPVKLSESITYTQVCGI 417
           +  + ++PG G+  E Y +F++GN+  L+K  +  CW      C      ++TY +V GI
Sbjct: 108 YFRNAVLPGAGLGLEGYVLFSIGNIEPLFKATWPQCWGHNATECSSNWIAAVTYLEVIGI 167

Query: 418 IFGQLFLGFFADRIGRKWGSVATAGTMVVGAILIISSAG 534
           + GQL +G   D IGR+WG +  A  M VG +++ +S G
Sbjct: 168 MVGQLVVGVIGDWIGRRWGLIQDAAIMFVGLLMLTASWG 206

>gb|AAD38859.1|AF156695_1 inorganic phosphate transporter [Solanum tuberosum]
          Length = 540

 Score = 48.5 bits (114), Expect = 6e-05
 Identities = 37/121 (30%), Positives = 57/121 (46%), Gaps = 7/121 (5%)
 Frame = +1

Query: 199 AEDLRPRNVI----VRFFQFLASFMIPGLGMFCEAYFVFAVGNLSALWKVEY---KNCWK 357
           A DL+  N +     + + F A  +I G+G F +AY +F +  ++ L    Y    N  K
Sbjct: 2   ANDLQVLNALDVAKTQLYHFTA-IVIAGMGFFTDAYDLFCISMVTKLLGRIYYHHDNALK 60

Query: 358 GIGCPVKLSESITYTQVCGIIFGQLFLGFFADRIGRKWGSVATAGTMVVGAILIISSAGP 537
               P  +S ++     CG + GQLF G+  D++GRK     T   MV+ +I    S G 
Sbjct: 61  PGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKKVYGMTLMIMVICSIASGLSFGH 120

Query: 538 T 540
           T
Sbjct: 121 T 121



EST assemble image


clone accession position
1 MXL063b09_r BP096691 1 380
2 MXL054h07_r BP096226 4 407
3 HCL045e09_r AV642095 17 475
4 MXL049d07_r BP095919 17 422
5 HCL084f12_r AV644247 37 531
6 HCL010c05_r AV640094 246 544




Chlamydomonas reinhardtii
Kazusa DNA Research Institute