Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002262A_C01 KCC002262A_c01
(654 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q42694|RUBA_CHLRE RuBisCO subunit binding-protein alpha subun... 306 2e-82
pir||S56645 chaperonin 60 alpha chain precursor, chloroplast - C... 303 2e-81
dbj|BAB16318.1| chaperonin-60 alpha subunit [Avicennia marina] 222 4e-57
ref|NP_180367.1| RuBisCO subunit binding-protein alpha subunit/6... 221 7e-57
gb|AAC68501.1| chaperonin 60 alpha subunit [Canavalia lineata] 220 2e-56
>sp|Q42694|RUBA_CHLRE RuBisCO subunit binding-protein alpha subunit, chloroplast
precursor (60 kDa chaperonin alpha subunit) (CPN-60
alpha) gi|603913|gb|AAA98642.1| chaperonin alpha-like
subunit
Length = 580
Score = 306 bits (784), Expect = 2e-82
Identities = 164/183 (89%), Positives = 168/183 (91%), Gaps = 1/183 (0%)
Frame = +1
Query: 109 PSRTSRP-ALRAAW*SALLTLRRFVFDQESRRRLQAGINKVADAVGVTLGPRGRNVVLEQ 285
P+R +R +RAA + VFDQESRRRLQAGINKVADAVGVTLGPRGRNVVLEQ
Sbjct: 22 PARAARRLVIRAA------DAKEIVFDQESRRRLQAGINKVADAVGVTLGPRGRNVVLEQ 75
Query: 286 KFGVPQVINDGVSIARAIELKDPVENAGAQLIKEVAGRTNDAAGDGTTTASVLAREMIHY 465
KFGVPQVINDGVSI RAIELKDPVENAGAQLIKEVAGRTNDAAGDGTTTASVLAREMIHY
Sbjct: 76 KFGVPQVINDGVSIRRAIELKDPVENAGAQLIKEVAGRTNDAAGDGTTTASVLAREMIHY 135
Query: 466 GLQSVTAGANPIAVKRGLDKTAEYLVAKLKEHAKPVKGRDDIKNVASISAGNDNAIGEMI 645
GLQSVTAGANPIAVKRGLDKTAEYLVAKLKEHAKPVKGRDDIKNVASISAGNDNAIGEMI
Sbjct: 136 GLQSVTAGANPIAVKRGLDKTAEYLVAKLKEHAKPVKGRDDIKNVASISAGNDNAIGEMI 195
Query: 646 ADA 654
ADA
Sbjct: 196 ADA 198
Score = 73.9 bits (180), Expect = 2e-12
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +3
Query: 66 QSQLAKGSRQTTGRPFQNKPARAARRLVIRAADAKEI 176
QSQLAKGSRQTTGRPFQNKPARAARRLVIRAADAKEI
Sbjct: 3 QSQLAKGSRQTTGRPFQNKPARAARRLVIRAADAKEI 39
>pir||S56645 chaperonin 60 alpha chain precursor, chloroplast - Chlamydomonas
reinhardtii
Length = 580
Score = 303 bits (775), Expect = 2e-81
Identities = 163/183 (89%), Positives = 167/183 (91%), Gaps = 1/183 (0%)
Frame = +1
Query: 109 PSRTSRP-ALRAAW*SALLTLRRFVFDQESRRRLQAGINKVADAVGVTLGPRGRNVVLEQ 285
P+R +R +RAA + VFDQESRRRLQAGINKVADAVGVTLGPRGRNVVLEQ
Sbjct: 22 PARAARRLVIRAA------DAKEIVFDQESRRRLQAGINKVADAVGVTLGPRGRNVVLEQ 75
Query: 286 KFGVPQVINDGVSIARAIELKDPVENAGAQLIKEVAGRTNDAAGDGTTTASVLAREMIHY 465
KFGVPQVI DGVSI RAIELKDPVENAGAQLIKEVAGRTNDAAGDGTTTASVLAREMIHY
Sbjct: 76 KFGVPQVIVDGVSIRRAIELKDPVENAGAQLIKEVAGRTNDAAGDGTTTASVLAREMIHY 135
Query: 466 GLQSVTAGANPIAVKRGLDKTAEYLVAKLKEHAKPVKGRDDIKNVASISAGNDNAIGEMI 645
GLQSVTAGANPIAVKRGLDKTAEYLVAKLKEHAKPVKGRDDIKNVASISAGNDNAIGEMI
Sbjct: 136 GLQSVTAGANPIAVKRGLDKTAEYLVAKLKEHAKPVKGRDDIKNVASISAGNDNAIGEMI 195
Query: 646 ADA 654
ADA
Sbjct: 196 ADA 198
Score = 73.9 bits (180), Expect = 2e-12
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +3
Query: 66 QSQLAKGSRQTTGRPFQNKPARAARRLVIRAADAKEI 176
QSQLAKGSRQTTGRPFQNKPARAARRLVIRAADAKEI
Sbjct: 3 QSQLAKGSRQTTGRPFQNKPARAARRLVIRAADAKEI 39
>dbj|BAB16318.1| chaperonin-60 alpha subunit [Avicennia marina]
Length = 326
Score = 222 bits (565), Expect = 4e-57
Identities = 110/162 (67%), Positives = 143/162 (87%)
Frame = +1
Query: 169 RRFVFDQESRRRLQAGINKVADAVGVTLGPRGRNVVLEQKFGVPQVINDGVSIARAIELK 348
+ FDQ+SR +Q GI+K+ADAVG+TLGPRGRNVVL++ FGVP+V+NDGV+IARAIEL
Sbjct: 52 KEIAFDQKSRSAMQTGIDKLADAVGLTLGPRGRNVVLDE-FGVPKVVNDGVTIARAIELP 110
Query: 349 DPVENAGAQLIKEVAGRTNDAAGDGTTTASVLAREMIHYGLQSVTAGANPIAVKRGLDKT 528
+ +ENAGA LI+EVA +TND+AGDGTTTASVLARE+I GL SVT+GANP++VKRG+DKT
Sbjct: 111 NAMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSVKRGIDKT 170
Query: 529 AEYLVAKLKEHAKPVKGRDDIKNVASISAGNDNAIGEMIADA 654
+ L+ +L+++A+P+KG +DIK +ASISAGND++IGEMIADA
Sbjct: 171 MQGLIEELEKNARPIKGGEDIKAIASISAGNDDSIGEMIADA 212
>ref|NP_180367.1| RuBisCO subunit binding-protein alpha subunit/60 kDa chaperonin
alpha subunit [Arabidopsis thaliana]
gi|2506276|sp|P21238|RUBA_ARATH RuBisCO subunit
binding-protein alpha subunit, chloroplast precursor (60
kDa chaperonin alpha subunit) (CPN-60 alpha)
gi|2129561|pir||S71235 chaperonin 60 alpha chain
precursor, chloroplast - Arabidopsis thaliana
gi|1223910|gb|AAA92061.1| chaperonin-60 alpha subunit
[Arabidopsis thaliana] gi|4510416|gb|AAD21502.1|
putative rubisco subunit binding-protein alpha subunit
[Arabidopsis thaliana] gi|27311671|gb|AAO00801.1|
putative rubisco subunit binding-protein alpha subunit
[Arabidopsis thaliana] gi|31711734|gb|AAP68223.1|
At2g28000 [Arabidopsis thaliana]
Length = 586
Score = 221 bits (563), Expect = 7e-57
Identities = 111/168 (66%), Positives = 142/168 (84%)
Frame = +1
Query: 151 SALLTLRRFVFDQESRRRLQAGINKVADAVGVTLGPRGRNVVLEQKFGVPQVINDGVSIA 330
S ++ FDQ SR LQAGI+K+AD VG+TLGPRGRNVVL++ FG P+V+NDGV+IA
Sbjct: 43 SVRANVKEIAFDQHSRAALQAGIDKLADCVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIA 101
Query: 331 RAIELKDPVENAGAQLIKEVAGRTNDAAGDGTTTASVLAREMIHYGLQSVTAGANPIAVK 510
RAIEL + +ENAGA LI+EVA +TND+AGDGTTTAS+LARE+I +GL SVT+GANP+++K
Sbjct: 102 RAIELPNAMENAGAALIREVASKTNDSAGDGTTTASILAREIIKHGLLSVTSGANPVSLK 161
Query: 511 RGLDKTAEYLVAKLKEHAKPVKGRDDIKNVASISAGNDNAIGEMIADA 654
RG+DKT + L+ +L++ A+PVKGRDDI+ VASISAGND+ IG MIADA
Sbjct: 162 RGIDKTVQGLIEELQKKARPVKGRDDIRAVASISAGNDDLIGSMIADA 209
>gb|AAC68501.1| chaperonin 60 alpha subunit [Canavalia lineata]
Length = 581
Score = 220 bits (560), Expect = 2e-56
Identities = 112/162 (69%), Positives = 139/162 (85%)
Frame = +1
Query: 169 RRFVFDQESRRRLQAGINKVADAVGVTLGPRGRNVVLEQKFGVPQVINDGVSIARAIELK 348
+ FDQ SR +QAGI+K+ADAVG+TLGPRGRNVVL++ FG P+V+NDGV+IARAIEL
Sbjct: 47 KEIAFDQSSRAAIQAGIDKLADAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELP 105
Query: 349 DPVENAGAQLIKEVAGRTNDAAGDGTTTASVLAREMIHYGLQSVTAGANPIAVKRGLDKT 528
D +ENAGA LI+EVA +TND+AGDGTTTASVLARE+I GL SVT+GANP+++KRG+DKT
Sbjct: 106 DAMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKT 165
Query: 529 AEYLVAKLKEHAKPVKGRDDIKNVASISAGNDNAIGEMIADA 654
+ LV +L++ A+PVKG DDIK VASISAGND IG+MIA+A
Sbjct: 166 VQGLVEELEKRARPVKGGDDIKAVASISAGNDELIGKMIAEA 207
