Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002254A_C01 KCC002254A_c01
(1299 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_568314.1| HSP100/ClpB, putative [Arabidopsis thaliana] gi... 405 e-111
ref|ZP_00105864.1| COG0542: ATPases with chaperone activity, ATP... 373 e-102
ref|NP_441776.1| ClpB protein [Synechocystis sp. PCC 6803] gi|24... 368 e-100
ref|NP_682179.1| ClpB protein [Thermosynechococcus elongatus BP-... 365 e-100
ref|NP_926523.1| endopeptidase Clp ATP-binding chain B [Gloeobac... 364 2e-99
>ref|NP_568314.1| HSP100/ClpB, putative [Arabidopsis thaliana] gi|11265210|pir||T51523
clpB heat shock protein-like - Arabidopsis thaliana
gi|9755800|emb|CAC01744.1| clpB heat shock protein-like
[Arabidopsis thaliana]
Length = 968
Score = 405 bits (1040), Expect = e-111
Identities = 219/377 (58%), Positives = 270/377 (71%), Gaps = 3/377 (0%)
Frame = +2
Query: 176 AATNVPRVLSGMHAGPRTTAVRFSSGHVE--AAAPLLPFSARQLAQPSPLSGLSLAPGLT 349
A T SG+ + T +S H++ AA P P S + L L + LT
Sbjct: 4 ATTTATAAFSGVVSVGTETRRIYSFSHLQPSAAFPAKPSSFKSLK-------LKQSARLT 56
Query: 350 VRPGRRTLATRAAQSGSGGGSGGGKRITQNQFTDKAWQAVVAAPEIAKEYGQQVVETEHL 529
R R R S S G R+TQ +FT+ AWQ++V++P++AKE QQ+VETEHL
Sbjct: 57 RRLDHRPFVVRCEASSSNG------RLTQQEFTEMAWQSIVSSPDVAKENKQQIVETEHL 110
Query: 530 LKALLEQPNGLARRILSKAGSDATRLLDRVDAYIRRQPTVSGDS-GQVLGRNLEALVNRS 706
+KALLEQ NGLARRI SK G D T++L+ + +I+RQP V GD+ G +LGR+LEAL R+
Sbjct: 111 MKALLEQKNGLARRIFSKIGVDNTKVLEATEKFIQRQPKVYGDAAGSMLGRDLEALFQRA 170
Query: 707 MELQAKWGDQFVSIEHLVAAMAEDGRFGESLFKAEGLTKDKLDAAIKDVRGTNKVVDQDP 886
+ + D +VS+EHLV A A+D RFG+ LFK +++ L +AI+ +RG V+DQDP
Sbjct: 171 RQFKKDLKDSYVSVEHLVLAFADDKRFGKQLFKDFQISERSLKSAIESIRGKQSVIDQDP 230
Query: 887 EGKYEALNKYARDLTAAARDGKLDPVIGRDDEIRRTIQILSRRTKNNPCLIGEPGVGKTA 1066
EGKYEAL KY +DLTA AR+GKLDPVIGRDDEIRR IQILSRRTKNNP LIGEPGVGKTA
Sbjct: 231 EGKYEALEKYGKDLTAMAREGKLDPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTA 290
Query: 1067 VVEGLAQRIVAGDVPQALQGRTLMALDMGSLIAGAKYRGEFEDRLKAVIKEVTDSAGKIV 1246
+ EGLAQRIV GDVPQAL R L++LDMG+LIAGAKYRGEFEDRLKAV+KEVTDS G+I+
Sbjct: 291 ISEGLAQRIVQGDVPQALMNRKLISLDMGALIAGAKYRGEFEDRLKAVLKEVTDSEGQII 350
Query: 1247 LFIDEIHTIVGAGATGG 1297
LFIDEIHT+VGAGAT G
Sbjct: 351 LFIDEIHTVVGAGATNG 367
>ref|ZP_00105864.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Nostoc
punctiforme]
Length = 872
Score = 373 bits (958), Expect = e-102
Identities = 189/288 (65%), Positives = 237/288 (81%), Gaps = 1/288 (0%)
Frame = +2
Query: 437 NQFTDKAWQAVVAAPEIAKEYGQQVVETEHLLKALLEQPNGLARRILSKAGSDATRLLDR 616
NQFT+KAW+A+ P+I K+Y QQ +E+EHL+KALLEQ +GLA IL+KAG + +L DR
Sbjct: 7 NQFTEKAWEAIAHTPDIVKQYQQQQIESEHLMKALLEQ-DGLATGILTKAGVNLQKLRDR 65
Query: 617 VDAYIRRQPTVSGDSGQV-LGRNLEALVNRSMELQAKWGDQFVSIEHLVAAMAEDGRFGE 793
+ + +RQP VSG S V LGR+L+ L++R+ + ++ D+++SIEHL+ A A+D RFG+
Sbjct: 66 TEQFFQRQPKVSGTSSSVYLGRSLDTLLDRADVYRKEFQDEYISIEHLLLAYAKDDRFGK 125
Query: 794 SLFKAEGLTKDKLDAAIKDVRGTNKVVDQDPEGKYEALNKYARDLTAAARDGKLDPVIGR 973
+LF+ GL + KL IK VRG+ KV DQ+PEGKYEAL KY RDLT AAR G+LDPVIGR
Sbjct: 126 ALFQEFGLDEGKLKDIIKQVRGSQKVTDQNPEGKYEALEKYGRDLTEAARKGQLDPVIGR 185
Query: 974 DDEIRRTIQILSRRTKNNPCLIGEPGVGKTAVVEGLAQRIVAGDVPQALQGRTLMALDMG 1153
DDEIRRT+QILSRRTKNNP LIGEPGVGKTA+ EGLAQRI+AGDVPQ+L+ R L++LDMG
Sbjct: 186 DDEIRRTVQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIIAGDVPQSLKDRKLISLDMG 245
Query: 1154 SLIAGAKYRGEFEDRLKAVIKEVTDSAGKIVLFIDEIHTIVGAGATGG 1297
+LIAGAK+RGEFE+RLKAV+KEVT+S G IVLFIDEIHT+VGAGAT G
Sbjct: 246 ALIAGAKFRGEFEERLKAVLKEVTESGGNIVLFIDEIHTVVGAGATQG 293
>ref|NP_441776.1| ClpB protein [Synechocystis sp. PCC 6803]
gi|2493734|sp|P74361|CLPB_SYNY3 ClpB protein
gi|7435716|pir||S76197 endopeptidase Clp ATP-binding
chain B1 - Synechocystis sp. (strain PCC 6803)
gi|1653543|dbj|BAA18456.1| ClpB protein [Synechocystis
sp. PCC 6803]
Length = 872
Score = 368 bits (945), Expect = e-100
Identities = 183/288 (63%), Positives = 237/288 (81%), Gaps = 1/288 (0%)
Frame = +2
Query: 437 NQFTDKAWQAVVAAPEIAKEYGQQVVETEHLLKALLEQPNGLARRILSKAGSDATRLLDR 616
N+FT+KAW+A+ PEIAK++ QQ +ETEHLL ALLEQ NGLA I +KAG+ R+ D+
Sbjct: 7 NKFTEKAWEAIAKTPEIAKQHRQQQIETEHLLSALLEQ-NGLATSIFNKAGASIPRVNDQ 65
Query: 617 VDAYIRRQPTVSGDSGQV-LGRNLEALVNRSMELQAKWGDQFVSIEHLVAAMAEDGRFGE 793
V+++I +QP +S S + LGR+L+ L++ + ++K+GD ++SIEHL+AA +D R G+
Sbjct: 66 VNSFIAQQPKLSNPSESIYLGRSLDKLLDNAEIAKSKYGDDYISIEHLMAAYGQDDRLGK 125
Query: 794 SLFKAEGLTKDKLDAAIKDVRGTNKVVDQDPEGKYEALNKYARDLTAAARDGKLDPVIGR 973
+L++ GLT++KL IK +RGT KV DQ+PEGKYE+L KY RDLT AR+GKLDPVIGR
Sbjct: 126 NLYREIGLTENKLAEIIKQIRGTQKVTDQNPEGKYESLEKYGRDLTELAREGKLDPVIGR 185
Query: 974 DDEIRRTIQILSRRTKNNPCLIGEPGVGKTAVVEGLAQRIVAGDVPQALQGRTLMALDMG 1153
D+E+RRTIQILSRRTKNNP LIGEPGVGKTA+ EGLAQRI+ DVP++L+ R L++LDMG
Sbjct: 186 DEEVRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIINHDVPESLRDRKLISLDMG 245
Query: 1154 SLIAGAKYRGEFEDRLKAVIKEVTDSAGKIVLFIDEIHTIVGAGATGG 1297
+LIAGAKYRGEFE+RLKAV+KEVTDS G+I+LFIDEIHT+VGAGAT G
Sbjct: 246 ALIAGAKYRGEFEERLKAVLKEVTDSQGQIILFIDEIHTVVGAGATQG 293
>ref|NP_682179.1| ClpB protein [Thermosynechococcus elongatus BP-1]
gi|22295113|dbj|BAC08941.1| ClpB protein
[Thermosynechococcus elongatus BP-1]
Length = 871
Score = 365 bits (937), Expect = e-100
Identities = 185/287 (64%), Positives = 228/287 (78%)
Frame = +2
Query: 437 NQFTDKAWQAVVAAPEIAKEYGQQVVETEHLLKALLEQPNGLARRILSKAGSDATRLLDR 616
NQFT+KAW A+ P++AK+ Q +E+EHL+K+LLEQ GLA +I KAG R+ D
Sbjct: 7 NQFTEKAWAAIARTPDLAKQAQHQNLESEHLMKSLLEQ-EGLATQIFQKAGCSVQRIRDL 65
Query: 617 VDAYIRRQPTVSGDSGQVLGRNLEALVNRSMELQAKWGDQFVSIEHLVAAMAEDGRFGES 796
D +I RQP +S SG LG++L+ L++R+ E + ++GD+F+SIEHLV A A+D RFG+
Sbjct: 66 TDEFISRQPKISHPSGVYLGQSLDKLLDRAEEARKQFGDEFISIEHLVLAFAQDDRFGKK 125
Query: 797 LFKAEGLTKDKLDAAIKDVRGTNKVVDQDPEGKYEALNKYARDLTAAARDGKLDPVIGRD 976
LF+ GL++ L AI+ +RG+ KV DQ+PEGKY AL KY RDLT AR GKLDPVIGRD
Sbjct: 126 LFQDIGLSEKVLREAIQQIRGSQKVTDQNPEGKYAALEKYGRDLTLLARQGKLDPVIGRD 185
Query: 977 DEIRRTIQILSRRTKNNPCLIGEPGVGKTAVVEGLAQRIVAGDVPQALQGRTLMALDMGS 1156
DEIRR IQILSRRTKNNP LIGEPGVGKTA+ EGLAQRIVA DVP +L+ R L+ALDMG+
Sbjct: 186 DEIRRVIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVARDVPDSLRDRQLIALDMGA 245
Query: 1157 LIAGAKYRGEFEDRLKAVIKEVTDSAGKIVLFIDEIHTIVGAGATGG 1297
LIAGAKYRGEFE+RLKAV+KEVTDS G+I+LFIDEIHT+VGAGAT G
Sbjct: 246 LIAGAKYRGEFEERLKAVLKEVTDSNGQIILFIDEIHTVVGAGATQG 292
>ref|NP_926523.1| endopeptidase Clp ATP-binding chain B [Gloeobacter violaceus]
gi|35214149|dbj|BAC91518.1| clpB [Gloeobacter violaceus]
Length = 872
Score = 364 bits (934), Expect = 2e-99
Identities = 184/288 (63%), Positives = 229/288 (78%), Gaps = 1/288 (0%)
Frame = +2
Query: 437 NQFTDKAWQAVVAAPEIAKEYGQQVVETEHLLKALLEQPNGLARRILSKAGSDATRLLDR 616
NQFT+KAW A+V E+AKEY QQ +E+EHL KALL+Q GLA I +KAG + T+L +R
Sbjct: 7 NQFTEKAWDAIVRTTEVAKEYRQQQLESEHLFKALLDQDGGLAGSIFTKAGVNLTKLGER 66
Query: 617 VDAYIRRQPTVSGDSGQV-LGRNLEALVNRSMELQAKWGDQFVSIEHLVAAMAEDGRFGE 793
V+ +I RQP ++ V LGR+L+AL++R+ + ++GD F+SIEHLV A A+D RFG+
Sbjct: 67 VEQFINRQPKLTNPGQSVYLGRSLDALLDRAEGFRKEYGDDFISIEHLVLAFAKDVRFGQ 126
Query: 794 SLFKAEGLTKDKLDAAIKDVRGTNKVVDQDPEGKYEALNKYARDLTAAARDGKLDPVIGR 973
+ + L + KL A + VRG KV Q+PE YE+L+KY RDLT AR+GKLDPVIGR
Sbjct: 127 QILREFSLDEAKLKAVVAQVRGNQKVTSQNPESTYESLDKYGRDLTQLAREGKLDPVIGR 186
Query: 974 DDEIRRTIQILSRRTKNNPCLIGEPGVGKTAVVEGLAQRIVAGDVPQALQGRTLMALDMG 1153
D+EIRRTIQILSRRTKNNP LIGEPGVGKTA+ EGLAQRIV+GDVP++LQGR L+ALDMG
Sbjct: 187 DEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVSGDVPESLQGRKLIALDMG 246
Query: 1154 SLIAGAKYRGEFEDRLKAVIKEVTDSAGKIVLFIDEIHTIVGAGATGG 1297
+LIAG+KYRGEFE+RLKAV+ EVT S G+IVLFIDEIHT+VGAGAT G
Sbjct: 247 ALIAGSKYRGEFEERLKAVLNEVTKSEGQIVLFIDEIHTVVGAGATQG 294
