Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002220A_C01 KCC002220A_c01
(532 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||A49227 sialidase - Actinomyces viscosus gi|141852|gb|AAA219... 49 3e-05
ref|NP_531478.1| conserved hypothetical protein [Agrobacterium t... 49 4e-05
ref|NP_353802.1| AGR_C_1421p [Agrobacterium tumefaciens] gi|2551... 49 4e-05
ref|XP_328324.1| predicted protein [Neurospora crassa] gi|289244... 48 9e-05
ref|ZP_00019536.1| hypothetical protein [Chloroflexus aurantiacus] 47 1e-04
>pir||A49227 sialidase - Actinomyces viscosus gi|141852|gb|AAA21932.1| sialidase
Length = 901
Score = 49.3 bits (116), Expect = 3e-05
Identities = 31/100 (31%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +3
Query: 228 EKKDKAPEQRKPGSAPTRLEGLDGTSPPEPVPARRAMTPDAPGPR-AKATEASPVAVSAA 404
E+ + P + P +PT T P P A A AP P A A+P SA
Sbjct: 659 EQCGQKPAEPSPAPSPTAAPSAAPTEKPAPSAAPSAEPTQAPAPSSAPEPSAAPEPSSAP 718
Query: 405 AESPSPASTTSPSEATKPTVVVAQPSRQASAPVEESASSP 524
A P+ A +T P+ A P+ Q +AP E++S+P
Sbjct: 719 APEPTTAPSTEPTPAPAPSSAPEQTDGPTAAPAPETSSAP 758
Score = 38.5 bits (88), Expect = 0.055
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Frame = +3
Query: 261 PGSAPTRLEGLDGTSPPEPVPARRA---MTPDAPG----PRAKATEASPVAVSAAAESPS 419
P PT+ G +S P+P RA + P A G P ++ ASP AA +P
Sbjct: 770 PSVEPTQAPGAQPSSAPKPGATGRAPSVVNPKATGAATEPGTPSSSASPAPSRNAAPTPK 829
Query: 420 PASTTSPSEATKPT-VVVAQPSRQASAP 500
P P E +P+ +AQP+ ASAP
Sbjct: 830 PG--MEPDEIDRPSDGTMAQPTGGASAP 855
Score = 38.5 bits (88), Expect = 0.055
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Frame = +3
Query: 261 PGSAPTRLEGLDGTSPPEPVPARRAMTPDAPGPRAKATEASPVAVSAAAESPSPASTTSP 440
P SAP + +S P P P T P P A ++P +P+P ++++P
Sbjct: 702 PSSAPEPSAAPEPSSAPAPEPTTAPSTEPTPAP---APSSAPEQTDGPTAAPAPETSSAP 758
Query: 441 -SEATK-PTVVVAQPSRQASAPVEESASSPG 527
+E T+ PTV + QA SA PG
Sbjct: 759 AAEPTQAPTVAPSVEPTQAPGAQPSSAPKPG 789
>ref|NP_531478.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58
(U. Washington)] gi|25522565|pir||AD2672 conserved
hypothetical protein Atu0778 [imported] - Agrobacterium
tumefaciens (strain C58, Dupont)
gi|17739149|gb|AAL41794.1| conserved hypothetical
protein [Agrobacterium tumefaciens str. C58 (U.
Washington)]
Length = 846
Score = 48.9 bits (115), Expect = 4e-05
Identities = 33/94 (35%), Positives = 44/94 (46%), Gaps = 10/94 (10%)
Frame = +3
Query: 276 TRLEGLDGTSPPEPV----------PARRAMTPDAPGPRAKATEASPVAVSAAAESPSPA 425
T L+ +D +P +P P RA+T P + T +SP + S+A+ SPS +
Sbjct: 437 TNLDNVDTVTPADPRSSGRQPRGIDPTNRAVTSTTPSASSGTTSSSPSSTSSASASPSGS 496
Query: 426 STTSPSEATKPTVVVAQPSRQASAPVEESASSPG 527
S TS S AT S AS P S SSPG
Sbjct: 497 SNTSTSPAT-------TTSGAASTPTASSVSSPG 523
>ref|NP_353802.1| AGR_C_1421p [Agrobacterium tumefaciens] gi|25519241|pir||B97454
hypothetical protein AGR_C_1421 [imported] -
Agrobacterium tumefaciens (strain C58, Cereon)
gi|15155755|gb|AAK86587.1| AGR_C_1421p [Agrobacterium
tumefaciens str. C58 (Cereon)]
Length = 848
Score = 48.9 bits (115), Expect = 4e-05
Identities = 33/94 (35%), Positives = 44/94 (46%), Gaps = 10/94 (10%)
Frame = +3
Query: 276 TRLEGLDGTSPPEPV----------PARRAMTPDAPGPRAKATEASPVAVSAAAESPSPA 425
T L+ +D +P +P P RA+T P + T +SP + S+A+ SPS +
Sbjct: 439 TNLDNVDTVTPADPRSSGRQPRGIDPTNRAVTSTTPSASSGTTSSSPSSTSSASASPSGS 498
Query: 426 STTSPSEATKPTVVVAQPSRQASAPVEESASSPG 527
S TS S AT S AS P S SSPG
Sbjct: 499 SNTSTSPAT-------TTSGAASTPTASSVSSPG 525
>ref|XP_328324.1| predicted protein [Neurospora crassa] gi|28924491|gb|EAA33616.1|
predicted protein [Neurospora crassa]
Length = 1800
Score = 47.8 bits (112), Expect = 9e-05
Identities = 39/163 (23%), Positives = 67/163 (40%), Gaps = 14/163 (8%)
Frame = +3
Query: 78 ELVRAWLS*CSAAARNAGYRSQIT--------GAT*KESPRS*LASFGLAKMGSLFSKEK 233
E++ + AA +N + ++T G E+P+S +A+F AK KE+
Sbjct: 691 EIISGGVDLPEAAIKNTAFEDELTRESDQAHQGPHDSETPKSQMAAFDQAKRVLKSMKER 750
Query: 234 KDKAPEQRKPGSAPTRLEGLDG--TSPPEPVPARRAMTPDAPGPRAKATEASPVAVSAAA 407
+ G P +D TSP P R+A A P + + AA
Sbjct: 751 PQTPVQSVSEGHTPGEQTPIDELTTSPKSPKKKRKAKKKTANPAEESTAPVQPESTTQAA 810
Query: 408 ESPSPASTTSPSEATKPTVV----VAQPSRQASAPVEESASSP 524
E+P+ +P E T V+ A+P+++ + ++S SP
Sbjct: 811 ETPTETPQETPQETTSQAVLSRPGPAKPTKKTNRDRKDSKLSP 853
>ref|ZP_00019536.1| hypothetical protein [Chloroflexus aurantiacus]
Length = 814
Score = 47.4 bits (111), Expect = 1e-04
Identities = 33/119 (27%), Positives = 50/119 (41%), Gaps = 8/119 (6%)
Frame = +3
Query: 189 SFGLAKMGSLFSKEKKDKAPEQRKPGSAPTRLEGLDG-TSPPEPVPARRAMTPDAPGPRA 365
S G + M L+S P + P PT + T+ P P+ T +P +
Sbjct: 688 SAGFSAMADLWSDVLCADLPREPDPSPTPTSTIYIPTVTNTSSPTPSSVITTTSSPTATS 747
Query: 366 KATEA-------SPVAVSAAAESPSPASTTSPSEATKPTVVVAQPSRQASAPVEESASS 521
T SP A ++ + SP +TT P+ T PTV V+ + Q +PV+ SS
Sbjct: 748 TPTATTSPTVTGSPTATTSPTATGSPTATTGPTATTSPTVTVSPTATQTGSPVQAPGSS 806
