Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002196A_C01 KCC002196A_c01
(457 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EAA42390.1| GLP_137_49800_52361 [Giardia lamblia ATCC 50803] 41 0.007
ref|ZP_00091118.1| COG0532: Translation initiation factor 2 (IF-... 40 0.012
ref|XP_062994.2| hypothetical protein XP_062994 [Homo sapiens] g... 39 0.021
ref|ZP_00089904.1| COG1674: DNA segregation ATPase FtsK/SpoIIIE ... 39 0.027
gb|AAH22954.1| Syn1 protein [Mus musculus] 39 0.027
>gb|EAA42390.1| GLP_137_49800_52361 [Giardia lamblia ATCC 50803]
Length = 853
Score = 40.8 bits (94), Expect = 0.007
Identities = 38/108 (35%), Positives = 44/108 (40%), Gaps = 6/108 (5%)
Frame = -1
Query: 421 GAPAQRPPPRRGRRRRPRRHWPRWPGPGARS*GAAA*HAPHRAPR*RRHLSC------AP 260
GA + P R G R R RR PRWPG R+ A +AP+ R LSC +P
Sbjct: 749 GATPRTPTARPGPRTRARR-CPRWPG-ARRARRGAQESGLGQAPKPGRRLSCGLAAGSSP 806
Query: 259 APGSLSHSLPREQPCLAAETPAAWRSAREWRANEERKSKMLADALAAG 116
PG SH+ P A T A W S RKS A G
Sbjct: 807 LPGVASHAPP-------AGTSAIWTSRLSEALPTLRKSWRTVGTAALG 847
>ref|ZP_00091118.1| COG0532: Translation initiation factor 2 (IF-2; GTPase)
[Azotobacter vinelandii]
Length = 1459
Score = 40.0 bits (92), Expect = 0.012
Identities = 52/145 (35%), Positives = 57/145 (38%), Gaps = 19/145 (13%)
Frame = +3
Query: 75 PSPGRW---GRRSRERGPAANASASILLLRSSFARHSLADRQAAGVSAARQGCSR--GKL 239
P+PGR R R GP A+ R AR R A G + R G
Sbjct: 70 PAPGRRQFDARPCRRHGPPTAAAGHP---RGDRARRRTGARAAGGGRPELRPAGRATGHR 126
Query: 240 *LKLPGAGAQ------DKCRRQRGAR*G--ACYAAAPHDRAPGPGHRGQWR----RGRRR 383
+ PGA D RR+ R G A A A RAPGP HRG R R R
Sbjct: 127 ARRGPGAAGTVRRAGADPLRRRAADRGGHPAPPAGAGRPRAPGPAHRGPGRSQRLRADRP 186
Query: 384 RPRRGGGRCAGAPQGE--AAQRHWR 452
R RR GGR A QG A RH R
Sbjct: 187 RCRRAGGRHRRA-QGRQPRAARHLR 210
>ref|XP_062994.2| hypothetical protein XP_062994 [Homo sapiens]
gi|21757443|dbj|BAC05121.1| unnamed protein product
[Homo sapiens]
Length = 221
Score = 39.3 bits (90), Expect = 0.021
Identities = 39/109 (35%), Positives = 46/109 (41%), Gaps = 12/109 (11%)
Frame = +3
Query: 153 RSSFARHSLADRQAAGVSAARQGCS----RGKL*LKLPGAGAQDK--------CRRQRGA 296
R S S+A QA+G GC G + P AQ RRQ A
Sbjct: 5 RPSKRLRSMAPNQASGGPPPEPGCCVADPEGSVEADGPAQPAQPAKPIAYVKPFRRQPPA 64
Query: 297 R*GACYAAAPHDRAPGPGHRGQWRRGRRRRPRRGGGRCAGAPQGEAAQR 443
R +P P RG+ RRG RRP RG GR AG P+G+A QR
Sbjct: 65 R----------PESPPPAERGR-RRGGSRRPGRGRGRRAG-PRGDAGQR 101
>ref|ZP_00089904.1| COG1674: DNA segregation ATPase FtsK/SpoIIIE and related proteins
[Azotobacter vinelandii]
Length = 1336
Score = 38.9 bits (89), Expect = 0.027
Identities = 42/147 (28%), Positives = 51/147 (34%), Gaps = 22/147 (14%)
Frame = +2
Query: 71 PAIPWPLGSSLARTRPGS*RIR*HLALALLVRAPLSRGSPSSRSLSSEAGLFARQTMTQT 250
P PW R RP H + R P +R SRS S +
Sbjct: 156 PVTPWVRARRRQRYRPRGSGGSPHRPAPVPARRPPARARTGSRSPSPPPA-----GRSPG 210
Query: 251 SWSGSARQMPTSTRCAMRCVLRCSAS*PGSRTRP-------PGPMA-----ARAAPAAAT 394
+W +AR P C LRC ++ R RP PGP+A A P A T
Sbjct: 211 AWRRTARSSPPPRPCRASVGLRCPSAAGPDRARPSDSPPPLPGPVARTPASAPPGPPATT 270
Query: 395 RR---------RALCWRASRR-SCATP 445
RR A WR + R CA P
Sbjct: 271 RRPPAGRAPKATAASWRRTGRWPCAMP 297
>gb|AAH22954.1| Syn1 protein [Mus musculus]
Length = 678
Score = 38.9 bits (89), Expect = 0.027
Identities = 42/135 (31%), Positives = 56/135 (41%), Gaps = 5/135 (3%)
Frame = -1
Query: 427 P*GAPAQ-RPPPRRGRRRRPRRHWPRWPGPGARS*GAAA*HAPHRAPR*RRHLS-CAPAP 254
P G PAQ RPPP+ G P PGPG + G P P+ ++HLS P
Sbjct: 452 PAGPPAQQRPPPQGG---------PPQPGPGPQRQGPPLQQRP--PPQGQQHLSGLGPPA 500
Query: 253 GSLSHSLPREQPCLAAETPAAWRSAREWRANEERKSKMLADALAAGPRSR---ERRPQRP 83
GS LP+ P A + A + R+S+ +A A P +R PQR
Sbjct: 501 GS---PLPQRLPSPTAAPQQSASQATPVTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQ 557
Query: 82 GDGWRGT*QQSFNTP 38
+ T Q S + P
Sbjct: 558 AGAPQATRQASISGP 572
