Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002193A_C01 KCC002193A_c01
(307 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK95680.1|AC087723_13 Hypothetical protein [Oryza sativa] gi... 41 0.004
ref|NP_880016.1| conserved hypothetical protein [Bordetella pert... 41 0.005
ref|ZP_00005743.1| COG0845: Membrane-fusion protein [Rhodobacter... 40 0.007
ref|NP_884123.1| conserved hypothetical protein [Bordetella para... 39 0.015
ref|NP_611825.1| CG11300-PA [Drosophila melanogaster] gi|7291634... 39 0.015
>gb|AAK95680.1|AC087723_13 Hypothetical protein [Oryza sativa] gi|22655717|gb|AAN04134.1|
Hypothetical protein [Oryza sativa]
gi|31430284|gb|AAP52218.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 258
Score = 41.2 bits (95), Expect = 0.004
Identities = 34/79 (43%), Positives = 38/79 (48%)
Frame = +1
Query: 61 RGRFGERAQEAAAGRE*CADRPVRADVCGGRRGGSSAAIGARQGRRTAGRQHAAAAVSGP 240
R R RAQ +AA A R R+ G G G+R+GRR A AAAAV G
Sbjct: 124 RSRRRVRAQPSAART--LAGRSWRSPRGAGSGRGCYRRGGSREGRRGARGASAAAAVDGC 181
Query: 241 AGGREHGRDRAHDGASARA 297
GG HGR R G S RA
Sbjct: 182 CGG--HGRSRRRRGQSRRA 198
>ref|NP_880016.1| conserved hypothetical protein [Bordetella pertussis]
gi|33572017|emb|CAE41540.1| conserved hypothetical
protein [Bordetella pertussis]
Length = 588
Score = 40.8 bits (94), Expect = 0.005
Identities = 34/92 (36%), Positives = 43/92 (45%), Gaps = 6/92 (6%)
Frame = +1
Query: 43 NESGSVRGRFGERAQEAAAGRE*CADRPVRAD---VCGGRRGGSSAAI---GARQGRRTA 204
N+S + RG G+ A+ A G D+P R G + GG AA GAR G++
Sbjct: 437 NDSAAGRGGKGKPAKGKAGG-----DKPQRGQGRKAAGAQAGGQGAAAKPAGARGGKKAG 491
Query: 205 GRQHAAAAVSGPAGGREHGRDRAHDGASARAV 300
GR AAA + AGGR G A G A V
Sbjct: 492 GR--AAAPGAKGAGGRAGGNKAASAGGKAAGV 521
>ref|ZP_00005743.1| COG0845: Membrane-fusion protein [Rhodobacter sphaeroides]
Length = 614
Score = 40.4 bits (93), Expect = 0.007
Identities = 30/83 (36%), Positives = 37/83 (44%), Gaps = 15/83 (18%)
Frame = +1
Query: 70 FGERAQEAAAGRE*CADRPVRADVCGGRRGGSSAAIGARQGRR------TAGRQHA---- 219
FG A+ + RE RPVRA +CG GG +A G +G R GR HA
Sbjct: 37 FGRMARASRHPRERLRPRPVRARLCGRAAGGGAARRGTHRGLRHGHADGNEGRGHARSDA 96
Query: 220 -----AAAVSGPAGGREHGRDRA 273
AA + G A + GRD A
Sbjct: 97 LCPQRAAGLDGCAAVQPAGRDEA 119
>ref|NP_884123.1| conserved hypothetical protein [Bordetella parapertussis]
gi|33566249|emb|CAE37160.1| conserved hypothetical
protein [Bordetella parapertussis]
Length = 592
Score = 39.3 bits (90), Expect = 0.015
Identities = 35/95 (36%), Positives = 44/95 (45%), Gaps = 9/95 (9%)
Frame = +1
Query: 43 NESGSVRGRFGERAQEAAAGRE*CADRPVR------ADVCGGRRGGSSAAI---GARQGR 195
N+S + RG G+ A+ A G D+P R A G +GG AA GAR G+
Sbjct: 444 NDSAAGRGGKGKPAKGKAGG-----DKPQRGQGRKAAGAQAGGQGGQGAAAKPAGARGGK 498
Query: 196 RTAGRQHAAAAVSGPAGGREHGRDRAHDGASARAV 300
+ GR AAA + AGGR G A G A V
Sbjct: 499 KAGGR--AAAPGAKGAGGRAGGNKAASAGGKAAGV 531
>ref|NP_611825.1| CG11300-PA [Drosophila melanogaster] gi|7291634|gb|AAF47057.1|
CG11300-PA [Drosophila melanogaster]
gi|21430504|gb|AAM50930.1| LP08443p [Drosophila
melanogaster]
Length = 157
Score = 39.3 bits (90), Expect = 0.015
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = -3
Query: 299 TARADAPSCARSRPCSRPPAGPDTA--AAACWRPAVRRPWRAPIAALEPPRLPPQTSART 126
TA AD+P A S P S PPAG T+ A P+ P +A P + T
Sbjct: 17 TAYADSPPAAGSPPASSPPAGTPTSPPPATGTPPSPSPATGTPPSASPAAGTPTSPTPAT 76
Query: 125 GRSAHHSRPAAASCARSPNRPRTEPDS 45
G + + P A + + SP P + DS
Sbjct: 77 GTPSSPATPDAPASSTSPATPTSPSDS 103
