Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002188A_C01 KCC002188A_c01
(472 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_055716.1| ring finger protein 44 [Homo sapiens] gi|568953... 33 1.7
emb|CAB95306.1| hypothetical protein L3302.03 [Leishmania major] 33 2.2
ref|NP_768347.1| blr1707 [Bradyrhizobium japonicum] gi|27377010|... 32 3.7
dbj|BAB55906.1| putative transposase-associated ATP-binding prot... 32 3.7
gb|AAG60878.1|AF322012_183 ID410 [Bradyrhizobium japonicum] gi|1... 32 3.7
>ref|NP_055716.1| ring finger protein 44 [Homo sapiens] gi|5689537|dbj|BAA83052.1|
KIAA1100 protein [Homo sapiens]
gi|24980826|gb|AAH39833.1| Ring finger protein 44 [Homo
sapiens]
Length = 432
Score = 33.1 bits (74), Expect = 1.7
Identities = 27/64 (42%), Positives = 32/64 (49%), Gaps = 9/64 (14%)
Frame = +2
Query: 287 RPWSAAGERWPKDART---------GSTPRIPYHTPNGLLGTTRSHPARILDEHLLWTQQ 439
RPW+ A RWP A GSTP + +P GL G S PAR DE L +QQ
Sbjct: 2 RPWALAVTRWPPSAPVGQRRFSAGPGSTPGQLWGSP-GLEGPLASPPAR--DERLP-SQQ 57
Query: 440 VPAR 451
P+R
Sbjct: 58 PPSR 61
>emb|CAB95306.1| hypothetical protein L3302.03 [Leishmania major]
Length = 2499
Score = 32.7 bits (73), Expect = 2.2
Identities = 23/80 (28%), Positives = 33/80 (40%), Gaps = 6/80 (7%)
Frame = +3
Query: 171 SRLPHSADVALADRKGNRAPLQYYGLSRRSRDTAGQRKAGPGQPPANGGQRTHAREA--- 341
SR +A+ L NR P Q G + R + +R+ + G RT AR +
Sbjct: 1741 SRTAAAANHHLGHSSKNRGPAQRSGKASRPQRAHSRRRHQQHSRSSRGHGRTSARSSLKR 1800
Query: 342 ---RHEFHTTRQTDCWARHV 392
+HE R D W RH+
Sbjct: 1801 RRRQHERRRKRHLDRWNRHI 1820
>ref|NP_768347.1| blr1707 [Bradyrhizobium japonicum] gi|27377010|ref|NP_768539.1|
bll1899 [Bradyrhizobium japonicum]
gi|27377107|ref|NP_768636.1| bll1996 [Bradyrhizobium
japonicum] gi|27378637|ref|NP_770166.1| bll3526
[Bradyrhizobium japonicum] gi|27380110|ref|NP_771639.1|
bll4999 [Bradyrhizobium japonicum]
gi|27349960|dbj|BAC46972.1| blr1707 [Bradyrhizobium
japonicum USDA 110] gi|27350152|dbj|BAC47164.1| bll1899
[Bradyrhizobium japonicum USDA 110]
gi|27350250|dbj|BAC47261.1| bll1996 [Bradyrhizobium
japonicum USDA 110] gi|27351785|dbj|BAC48791.1| bll3526
[Bradyrhizobium japonicum USDA 110]
gi|27353264|dbj|BAC50264.1| bll4999 [Bradyrhizobium
japonicum USDA 110]
Length = 281
Score = 32.0 bits (71), Expect = 3.7
Identities = 17/46 (36%), Positives = 25/46 (53%)
Frame = +3
Query: 195 VALADRKGNRAPLQYYGLSRRSRDTAGQRKAGPGQPPANGGQRTHA 332
+A DR + A + + R TA +RK GPG+PP + Q+T A
Sbjct: 236 LAAIDRLVHHATIVEMNVESYRRRTALERKRGPGRPPEHATQKTLA 281
>dbj|BAB55906.1| putative transposase-associated ATP-binding protein [Bradyrhizobium
elkanii]
Length = 281
Score = 32.0 bits (71), Expect = 3.7
Identities = 17/46 (36%), Positives = 25/46 (53%)
Frame = +3
Query: 195 VALADRKGNRAPLQYYGLSRRSRDTAGQRKAGPGQPPANGGQRTHA 332
+A DR + A + + R TA +RK GPG+PP + Q+T A
Sbjct: 236 LAAIDRLVHHATIVEMNVESYRRRTALERKRGPGRPPEHATQKTLA 281
>gb|AAG60878.1|AF322012_183 ID410 [Bradyrhizobium japonicum]
gi|12620691|gb|AAG60967.1|AF322013_86 ID646
[Bradyrhizobium japonicum]
Length = 269
Score = 32.0 bits (71), Expect = 3.7
Identities = 17/46 (36%), Positives = 25/46 (53%)
Frame = +3
Query: 195 VALADRKGNRAPLQYYGLSRRSRDTAGQRKAGPGQPPANGGQRTHA 332
+A DR + A + + R TA +RK GPG+PP + Q+T A
Sbjct: 224 LAAIDRLVHHATIVEMNVESYRRRTALERKRGPGRPPEHATQKTLA 269
