KCC002184A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002184A_C01 KCC002184A_c01
gtgctacGCACGCTGTAAAATAAACTCTTCACTTATTACTTCGTGCTTGTTCTGGGCCTT
TTTCGCTGACTCGGCCCTTCTTCTCGGTCGTTTACTCACGTTACGCAACTGCATCTTGTG
CTTTTAGACCAAAACTTGACATGCTCAGGGCTGGGCAGCCCACCTGCTTGGGCGCACAGC
CCCGCCTTCGCGTTCGGGAGCTGCGCTGCATCGCGCCCGCTGTCCGCGGCATTGCGCCAT
GCGTGGCCAGACCTATTGATGCAGCCTCTGTCGGGCCTGCTTGTCGGCCAGGGCTTCGGC
GAGGGAAATGTGATGGCGG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002184A_C01 KCC002184A_c01
         (319 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAD27781.1|AF077048_1 single strand DNA-binding protein [Homo...    34  0.48
sp|Q13574|KDGZ_HUMAN Diacylglycerol kinase, zeta (Diglyceride ki...    33  1.1
ref|ZP_00008492.1| COG0513: Superfamily II DNA and RNA helicases...    33  1.1
dbj|BAB28248.1| unnamed protein product [Mus musculus]                 32  1.8
ref|NP_572484.1| CG15350-PA [Drosophila melanogaster] gi|2283195...    32  1.8

>gb|AAD27781.1|AF077048_1 single strand DNA-binding protein [Homo sapiens]
          Length = 370

 Score = 34.3 bits (77), Expect = 0.48
 Identities = 19/66 (28%), Positives = 28/66 (41%), Gaps = 2/66 (3%)
 Frame = -1

Query: 319 PPSHFPRRSPGRQAGPTEAASIGL--ATHGAMPRTAGAMQRSSRTRRRGCAPKQVGCPAL 146
           PP   P ++ G   G       G+        P   G MQR+  ++R GC    V  P L
Sbjct: 137 PPLRIPNQALGGVPGSQPLLPSGMDPTRQQGHPNMGGPMQRNDSSKRNGCLRTTVLTPGL 196

Query: 145 SMSSFG 128
           S+ ++G
Sbjct: 197 SLQNYG 202

>sp|Q13574|KDGZ_HUMAN Diacylglycerol kinase, zeta (Diglyceride kinase) (DGK-zeta) (DAG
           kinase zeta) gi|2183038|gb|AAB60859.1| diacylglycerol
           kinase zeta [Homo sapiens]
          Length = 1117

 Score = 33.1 bits (74), Expect = 1.1
 Identities = 21/65 (32%), Positives = 31/65 (47%)
 Frame = -1

Query: 310 HFPRRSPGRQAGPTEAASIGLATHGAMPRTAGAMQRSSRTRRRGCAPKQVGCPALSMSSF 131
           HF  + PG   G    +S+GL T  A  R+      SS  +RR  + +  GC    + S 
Sbjct: 8   HFRGKVPGPGEGQRRPSSVGLPTGKARRRSPAGQASSSLAQRRRSSAQLQGC----LLSC 63

Query: 130 GLKAQ 116
           G++AQ
Sbjct: 64  GVRAQ 68

>ref|ZP_00008492.1| COG0513: Superfamily II DNA and RNA helicases [Rhodopseudomonas
           palustris]
          Length = 474

 Score = 33.1 bits (74), Expect = 1.1
 Identities = 20/45 (44%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
 Frame = -1

Query: 301 RRSPGRQAGPTEAASIG--LATHGAMPRTAGAMQRSSRTRRRGCA 173
           RR+PG  A PT     G   A HG  PR   A  R    RRRG A
Sbjct: 380 RRTPGAHAAPTPPPHRGPRQAPHGHSPRNGDAPTRGKNHRRRGPA 424

>dbj|BAB28248.1| unnamed protein product [Mus musculus]
          Length = 131

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 21/59 (35%), Positives = 25/59 (41%), Gaps = 1/59 (1%)
 Frame = -3

Query: 278 RPDRGCINRSGHAWR-NAADSGRDAAQLPNAKAGLCAQAGGLPSPEHVKFWSKSTRCSC 105
           RP R C  R    W+  +  +GR         AG  A+  G P P     W K TRCSC
Sbjct: 55  RPARVCSPRLARTWKATSLMTGRTTTSSLKRSAG-AARCTGCPPP-----WRKPTRCSC 107

>ref|NP_572484.1| CG15350-PA [Drosophila melanogaster] gi|22831952|gb|AAF46380.2|
           CG15350-PA [Drosophila melanogaster]
          Length = 500

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 22/71 (30%), Positives = 36/71 (49%), Gaps = 4/71 (5%)
 Frame = -2

Query: 237 AQCRGQRARCSAAPEREGGAVRPSRWAAQP*ACQVLV*KHKMQLRNVSKRPRRRAESAKK 58
           + C GQ+ R  A+P R   A+R  R   QP +   L+ +  M+ + + +RP R  +   K
Sbjct: 122 SSCSGQKPRYVASPVRSPNAIRRRRDVRQPGS---LLRRRLMRQQKIQERPPRFVKLYHK 178

Query: 57  ----AQNKHEV 37
               AQ KH++
Sbjct: 179 DLTPAQEKHQL 189



EST assemble image


clone accession position
1 LCL044b04_r AV628583 1 262
2 HC100e07_r AV639526 8 319




Chlamydomonas reinhardtii
Kazusa DNA Research Institute