Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002168A_C01 KCC002168A_c01
(473 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA99512.1| P0489A01.2 [Oryza sativa (japonica cultivar-group)] 41 0.006
sp|Q9SW75|R10A_CHLRE 60S ribosomal protein L10a gi|5738231|gb|AA... 40 0.018
ref|XP_059832.2| hypothetical protein XP_059832 [Homo sapiens] 37 0.12
ref|XP_347060.1| hypothetical protein XP_347059 [Rattus norvegicus] 37 0.15
ref|ZP_00033594.1| COG0313: Predicted methyltransferases [Burkho... 37 0.15
>dbj|BAA99512.1| P0489A01.2 [Oryza sativa (japonica cultivar-group)]
Length = 1212
Score = 41.2 bits (95), Expect = 0.006
Identities = 30/86 (34%), Positives = 36/86 (40%)
Frame = +3
Query: 60 SALSESLNLSPPRDALAHKYTRTAKACARLHTAAHCSAPASLRRAAAVD*RPSAPARSWV 239
S L SL+ PPRDA + T + AA C A+ A A PS P
Sbjct: 6 SDLDLSLSRRPPRDAAPRRRRATPPPSTPRNAAAACQRHAAA--AVATPPPPSPPCAQCR 63
Query: 240 RVLLVRPYPNTRTPPRPIHANSAVSP 317
R P P TPP P HA +A +P
Sbjct: 64 RRHATPPPPRHTTPPPPRHAAAATAP 89
>sp|Q9SW75|R10A_CHLRE 60S ribosomal protein L10a gi|5738231|gb|AAD50305.1|AF175385_1 60S
ribosomal protein L10a [Chlamydomonas reinhardtii]
Length = 213
Score = 39.7 bits (91), Expect = 0.018
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -1
Query: 473 NDVLRESVSALVEGAKTKP 417
NDVLRESVSALVEGAKTKP
Sbjct: 6 NDVLRESVSALVEGAKTKP 24
>ref|XP_059832.2| hypothetical protein XP_059832 [Homo sapiens]
Length = 295
Score = 37.0 bits (84), Expect = 0.12
Identities = 15/49 (30%), Positives = 31/49 (62%)
Frame = +2
Query: 158 RALQCPSVPSEGCSRGLTPISPRSKLGSRAACPPIPKHPHTATSHSCKL 304
+ L+ P++ S+ S+ TP+ P++ GSR + PP+P +++ ++ KL
Sbjct: 168 KKLRLPAIDSKYLSKAGTPLGPKNPAGSRLSFPPVPGQKNSSPTNFSKL 216
>ref|XP_347060.1| hypothetical protein XP_347059 [Rattus norvegicus]
Length = 186
Score = 36.6 bits (83), Expect = 0.15
Identities = 31/94 (32%), Positives = 41/94 (42%), Gaps = 5/94 (5%)
Frame = +3
Query: 18 RSCQSAAAYCLCTYSALSESLNLSPPRDALAHKYTRTAKACARLHTAA-----HCSAPAS 182
R+ + A A C + +LS + S P A+ AR+HT A HC +P
Sbjct: 74 RTSRVARATCEAGWLSLSADTSPSLPPVPWRSGARELARTPARIHTHARARDHHCCSPGR 133
Query: 183 LRRAAAVD*RPSAPARSWVRVLLVRPYPNTRTPP 284
RAAAV P + S R +L R P R PP
Sbjct: 134 ADRAAAVS--PGSSGES--RAVLSRREPGARRPP 163
>ref|ZP_00033594.1| COG0313: Predicted methyltransferases [Burkholderia fungorum]
Length = 416
Score = 36.6 bits (83), Expect = 0.15
Identities = 37/116 (31%), Positives = 49/116 (41%), Gaps = 8/116 (6%)
Frame = +3
Query: 6 SPPYRSCQSAAAYCLCTYSALSESL---NLSPPRDALA----HKYTRTAKACARLHTAAH 164
+PPYR C A A SA S S ++SPPR A K R +CAR AA
Sbjct: 13 APPYRRC--ARARTSTNTSAPSRSRITRSISPPRHATLRATNRKRCRCKNSCARASKAAP 70
Query: 165 CSA-PASLRRAAAVD*RPSAPARSWVRVLLVRPYPNTRTPPRPIHANSAVSPHHCV 329
S P + + V +AP + R + + P + PPR N + P CV
Sbjct: 71 TSLDPTGAEKLSGV---ANAPIGATARTVCLS--PRSPEPPRTAWHNGGLVPSVCV 121
