KCC002156A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002156A_C01 KCC002156A_c01
ctaaatacacgcatcgctcgggaaCTCCTACGTTGGACACCATTTGCTTGTCTGATAGAG
CATTCCTAGTATCTGTTAACTAGTAAGCTGCAGCTGGCACAGACATTGCAAACCAAGGAA
GCTTATAAAGCATCGCTGAGACCAGCGAGACGAAGGATATAGTATTAGGGACGGACTAGT
GTCTCAGACCCAGCTGCACACAGGCTCCTCGCTCTCCTTGCACGGTCCGGACCCCGCGCT
TCACACACACCCAGCGCAGCCGCCGCTAGACTCTCCCTCCATCCCTCTCGATCGCATAGT
ACTTCATCATGGGTGGCGAGAAGCTGCTTGACCAGATCTTCAACCTAAAGTTCACCGCCA
AGCAGCTTGCACGCTCGGCAGTGAAATGCGAGAAAGAGGAGAAGGCAGAGAAGTTGAAGG
TGAAGAAGGCCATCGA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002156A_C01 KCC002156A_c01
         (436 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_565053.1| developmental protein DG1118 -related [Arabidop...    61  4e-09
gb|AAM61431.1| developmental protein, putative [Arabidopsis thal...    61  4e-09
gb|AAP15161.1| superal1 [Zea mays]                                     60  7e-09
gb|AAO72640.1| development protein-like protein [Oryza sativa (j...    59  1e-08
ref|NP_173215.1| developmental protein -related [Arabidopsis tha...    59  1e-08

>ref|NP_565053.1| developmental protein DG1118 -related [Arabidopsis thaliana]
           gi|25406243|pir||G96755 developmental protein homolog
           DG1118 [imported] - Arabidopsis thaliana
           gi|5903092|gb|AAD55650.1|AC008017_23 Highly similar to
           developmental protein DG1118 [Arabidopsis thaliana]
           gi|16648963|gb|AAL24333.1| Highly similar to
           developmental protein DG1118 [Arabidopsis thaliana]
           gi|20148689|gb|AAM10235.1| similar to developmental
           protein DG1118 [Arabidopsis thaliana]
          Length = 203

 Score = 60.8 bits (146), Expect = 4e-09
 Identities = 29/39 (74%), Positives = 35/39 (89%)
 Frame = +3

Query: 318 EKLLDQIFNLKFTAKQLARSAVKCEKEEKAEKLKVKKAI 434
           +KL++QIF+LKFT+K L R + KCEKEEKAEKLKVKKAI
Sbjct: 5   DKLMNQIFDLKFTSKSLQRQSRKCEKEEKAEKLKVKKAI 43

>gb|AAM61431.1| developmental protein, putative [Arabidopsis thaliana]
          Length = 203

 Score = 60.8 bits (146), Expect = 4e-09
 Identities = 29/39 (74%), Positives = 35/39 (89%)
 Frame = +3

Query: 318 EKLLDQIFNLKFTAKQLARSAVKCEKEEKAEKLKVKKAI 434
           +KL++QIF+LKFT+K L R + KCEKEEKAEKLKVKKAI
Sbjct: 5   DKLMNQIFDLKFTSKSLQRQSRKCEKEEKAEKLKVKKAI 43

>gb|AAP15161.1| superal1 [Zea mays]
          Length = 204

 Score = 60.1 bits (144), Expect = 7e-09
 Identities = 29/39 (74%), Positives = 34/39 (86%)
 Frame = +3

Query: 318 EKLLDQIFNLKFTAKQLARSAVKCEKEEKAEKLKVKKAI 434
           EKL++QIF+LKFT+K L R A KCEKEEK +KLKVKKAI
Sbjct: 5   EKLMNQIFDLKFTSKSLQRQARKCEKEEKEQKLKVKKAI 43

>gb|AAO72640.1| development protein-like protein [Oryza sativa (japonica
           cultivar-group)]
          Length = 205

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 29/39 (74%), Positives = 33/39 (84%)
 Frame = +3

Query: 318 EKLLDQIFNLKFTAKQLARSAVKCEKEEKAEKLKVKKAI 434
           EKL+ QIF+LKFT+K L R A KCEKEEK +KLKVKKAI
Sbjct: 5   EKLMTQIFDLKFTSKSLQRQARKCEKEEKEQKLKVKKAI 43

>ref|NP_173215.1| developmental protein -related [Arabidopsis thaliana]
           gi|21553734|gb|AAM62827.1| developmental protein,
           putative [Arabidopsis thaliana]
           gi|26451738|dbj|BAC42964.1| unknown protein [Arabidopsis
           thaliana]
          Length = 203

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 28/39 (71%), Positives = 34/39 (86%)
 Frame = +3

Query: 318 EKLLDQIFNLKFTAKQLARSAVKCEKEEKAEKLKVKKAI 434
           +KL++QIF LKFT+K L R A KCEKEE++EKLKVKKAI
Sbjct: 5   DKLMNQIFELKFTSKSLQRQARKCEKEERSEKLKVKKAI 43



EST assemble image


clone accession position
1 LC026e03_r AV620761 1 377
2 HC089b08_r AV638662 25 436




Chlamydomonas reinhardtii
Kazusa DNA Research Institute