KCC002155A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002155A_C01 KCC002155A_c01
gtgacgctttttccaaatAACCTCGCCCTAAAGCTGCTGAGAATAGGCCAGAGACCGTAC
ACATCTCTCACAGTCTGTCCACGCTTCTGCGTCGATTTACATTCCTGAGCTAGCTCCCCT
GGTGGGACTGGAGGATTGAGATAACCATGGACGCTGTAGAGAGGCTCGGCTCTATGTTCA
CGGGGAGGCGATTCGACGGGGTGAACCTAAACACGTTCCTCAAGTTTACGCAGCTAGACC
CCGGCGTCCAGGCCTACCTGCAGCGTGTCTACCTGACCCTGTCGGTGGCTGTGGCCATCT
CGGCGCTAGGTTGCTTCCTTGACATCCAGTACAGCATCGGCGGCTGGCTGACTGGCCTGA
TGGGCTTCGGCTGCATGCTGGGCCTGGCCTTCACCTCCGCCACCCCCCAGACACTGAACA
AGCGGTATGCGCTGCTGGGCGGCTTTGCGTTCTGCCAGGGCGCGGCGCTGGGCCCTCTGG
TGGGCCTGGCTGCTGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002155A_C01 KCC002155A_c01
         (496 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|Q9MBD8|BI1_ORYSA Bax inhibitor-1 (BI-1) (OsBI-1) gi|7209772|d...    71  6e-12
emb|CAC82183.1| putative BAX inhibitor 1 [Hordeum vulgare subsp....    67  1e-10
emb|CAC37797.1| BAX inhibitor 1 [Hordeum vulgare subsp. vulgare]       67  1e-10
gb|AAK73102.1|AF390556_1 Bax inhibitor 1 [Nicotiana tabacum]           67  2e-10
gb|AAM65074.1| Bax inhibitor-1 like [Arabidopsis thaliana]             67  2e-10

>sp|Q9MBD8|BI1_ORYSA Bax inhibitor-1 (BI-1) (OsBI-1) gi|7209772|dbj|BAA89540.3| Bax
           inhibitor-1 [Oryza sativa]
          Length = 249

 Score = 71.2 bits (173), Expect = 6e-12
 Identities = 45/116 (38%), Positives = 67/116 (56%), Gaps = 1/116 (0%)
 Frame = +3

Query: 147 MDAVERLGSMFTGRRFDGVNLNTFLKFTQLDPGVQAYLQRVYLTLSVAVAISALGCFLDI 326
           MDA     S + G    G   ++   F Q+ P VQ++L+ VYLTL VA+A SA+G +L +
Sbjct: 1   MDAFYSTSSAY-GAAASGWGYDSLKNFRQISPAVQSHLKLVYLTLCVALAASAVGAYLHV 59

Query: 327 QYSIGGWLTGLMGFGCMLGLAFTSATPQ-TLNKRYALLGGFAFCQGAALGPLVGLA 491
             +IGG LT L   GC+  +A+  + P     KR+ +L   A  +GA++GPL+ LA
Sbjct: 60  ALNIGGMLTML---GCVGSIAWLFSVPVFEERKRFGILLAAALLEGASVGPLIKLA 112

>emb|CAC82183.1| putative BAX inhibitor 1 [Hordeum vulgare subsp. vulgare]
          Length = 146

 Score = 67.0 bits (162), Expect = 1e-10
 Identities = 40/90 (44%), Positives = 57/90 (62%), Gaps = 1/90 (1%)
 Frame = +3

Query: 225 FTQLDPGVQAYLQRVYLTLSVAVAISALGCFLDIQYSIGGWLTGLMGFGCMLGLAFTSAT 404
           F Q+ P VQ++L+ VYLTL  A+A SA+G +L I  +IGG LT L    C+  +A+  + 
Sbjct: 17  FRQISPAVQSHLKLVYLTLCFALASSAVGAYLHIALNIGGMLTML---ACVGTIAWMFSV 73

Query: 405 P-QTLNKRYALLGGFAFCQGAALGPLVGLA 491
           P     KR+ LL G A  +GA++GPL+ LA
Sbjct: 74  PVYEERKRFGLLMGAALLEGASVGPLIELA 103

>emb|CAC37797.1| BAX inhibitor 1 [Hordeum vulgare subsp. vulgare]
          Length = 247

 Score = 67.0 bits (162), Expect = 1e-10
 Identities = 40/90 (44%), Positives = 57/90 (62%), Gaps = 1/90 (1%)
 Frame = +3

Query: 225 FTQLDPGVQAYLQRVYLTLSVAVAISALGCFLDIQYSIGGWLTGLMGFGCMLGLAFTSAT 404
           F Q+ P VQ++L+ VYLTL  A+A SA+G +L I  +IGG LT L    C+  +A+  + 
Sbjct: 23  FRQISPAVQSHLKLVYLTLCFALASSAVGAYLHIALNIGGMLTML---ACVGTIAWMFSV 79

Query: 405 P-QTLNKRYALLGGFAFCQGAALGPLVGLA 491
           P     KR+ LL G A  +GA++GPL+ LA
Sbjct: 80  PVYEERKRFGLLMGAALLEGASVGPLIELA 109

>gb|AAK73102.1|AF390556_1 Bax inhibitor 1 [Nicotiana tabacum]
          Length = 249

 Score = 66.6 bits (161), Expect = 2e-10
 Identities = 40/90 (44%), Positives = 56/90 (61%), Gaps = 1/90 (1%)
 Frame = +3

Query: 225 FTQLDPGVQAYLQRVYLTLSVAVAISALGCFLDIQYSIGGWLTGLMGFGCMLGLAFTSAT 404
           F Q+ P VQ +L++VYL+L  A+  SA G +L I ++IGG LT L   GC+  + +  AT
Sbjct: 27  FRQISPFVQTHLKKVYLSLCCALVASAAGAYLHILWNIGGLLTTL---GCVGSIVWLMAT 83

Query: 405 P-QTLNKRYALLGGFAFCQGAALGPLVGLA 491
           P     KR ALL   A  +GA++GPL+ LA
Sbjct: 84  PLYEEQKRIALLMAAALFKGASIGPLIELA 113

>gb|AAM65074.1| Bax inhibitor-1 like [Arabidopsis thaliana]
          Length = 247

 Score = 66.6 bits (161), Expect = 2e-10
 Identities = 38/89 (42%), Positives = 54/89 (59%)
 Frame = +3

Query: 225 FTQLDPGVQAYLQRVYLTLSVAVAISALGCFLDIQYSIGGWLTGLMGFGCMLGLAFTSAT 404
           F Q+ P VQ +L+RVYLTL  A+  SA G +L + ++IGG LT +   G M+ L   S  
Sbjct: 25  FRQISPAVQNHLKRVYLTLCCALVASAFGAYLHVLWNIGGILTTIGCIGTMIWL--LSCP 82

Query: 405 PQTLNKRYALLGGFAFCQGAALGPLVGLA 491
           P    KR +LL   A  +GA++GPL+ +A
Sbjct: 83  PYEHQKRLSLLFASAVLEGASVGPLIKVA 111



EST assemble image


clone accession position
1 LC096h06_r AV625721 1 340
2 HC088h11_r AV638644 19 496




Chlamydomonas reinhardtii
Kazusa DNA Research Institute