KCC002140A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002140A_C01 KCC002140A_c01
gctaaacgacacaacacaacaCAACACGAGACTAGTGCAGCCGCAAACACAACACAACAC
AACCGCCACAAAATGGGCAAACACGGTCACCGTGTAAACAAAACTACGACCCAACTCGCT
GATCAACCTAGGGCAGCGTGGCGAGCGTCCCAGGAATCGCCTCAATCGTCTCTATCGCAC
TCAGGACACTCGCCGGAGATGGCGAGCAGCGGACCCGAGCGTCGGCTGGACACTCACAGC
AGTTCCAGCAGCAGTGGAGACAGGCAGGCCTCCGGACAGCACGCTACTTGCAGCCCGATG
AGCATCGGCACCGTCGACTCGAGCGAGCAGCCCACATCCAAGCGCGCTGCCGACTGGTTA
CGGAGCATCAAACTTCGGCTTCAGTTCTCGACCAGCCTGATCGTGGACGCACTGGCAAAC
ACTGACACACTCCCAGCATCCTCA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002140A_C01 KCC002140A_c01
         (444 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|XP_300853.1| hypothetical protein XP_300853 [Homo sapiens]         41  0.003
ref|NP_872435.1| hypothetical protein FLJ35107 [Homo sapiens] gi...    39  0.016
sp|Q06990|ASPX_PAPHA Acrosomal protein SP-10 precursor (Acrosoma...    39  0.016
emb|CAB91473.2| related to a-agglutinin core protein AGA1 [Neuro...    39  0.016
ref|XP_325290.1| hypothetical protein ( related to a-agglutinin ...    39  0.016

>ref|XP_300853.1| hypothetical protein XP_300853 [Homo sapiens]
          Length = 252

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 27/105 (25%), Positives = 49/105 (45%)
 Frame = +1

Query: 10  HNTTQHETSAAANTTQHNRHKMGKHGHRVNKTTTQLADQPRAAWRASQESPQSSLSHSGH 189
           H+++   +S++ ++   +           N +++  +  P ++  +S  SP SS S    
Sbjct: 78  HSSSSPSSSSSTSSPSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSS 137

Query: 190 SPEMASSGPERRLDTHSSSSSSGDRQASGQHATCSPMSIGTVDSS 324
           S   +SS P     + SSSSSS    +S   ++ SP S G+  SS
Sbjct: 138 SSSSSSSSPSSSSSSPSSSSSSSS-SSSSSPSSSSPSSSGSSPSS 181

 Score = 36.2 bits (82), Expect = 0.10
 Identities = 22/53 (41%), Positives = 28/53 (52%)
 Frame = +1

Query: 145 ASQESPQSSLSHSGHSPEMASSGPERRLDTHSSSSSSGDRQASGQHATCSPMS 303
           +S  S  SS S S  SP  +SS P  R  + SSSSSS    +S   ++ SP S
Sbjct: 177 SSPSSSNSSPSSSSSSPSSSSSSPSPRSSSPSSSSSSTSSPSSSSPSSSSPSS 229

 Score = 35.0 bits (79), Expect = 0.23
 Identities = 22/65 (33%), Positives = 30/65 (45%)
 Frame = +1

Query: 145 ASQESPQSSLSHSGHSPEMASSGPERRLDTHSSSSSSGDRQASGQHATCSPMSIGTVDSS 324
           +S  S   S SHS  SP  +SS       + SSSSS     +S   ++ SP S  +  SS
Sbjct: 67  SSPSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSS 126

Query: 325 EQPTS 339
              +S
Sbjct: 127 SPSSS 131

 Score = 34.7 bits (78), Expect = 0.31
 Identities = 23/64 (35%), Positives = 29/64 (44%)
 Frame = +1

Query: 148 SQESPQSSLSHSGHSPEMASSGPERRLDTHSSSSSSGDRQASGQHATCSPMSIGTVDSSE 327
           S  SP SS S S  S   +SS         SSSSSS    +S   ++ SP S  +  SS 
Sbjct: 79  SSSSPSSSSSTSSPSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSS 138

Query: 328 QPTS 339
             +S
Sbjct: 139 SSSS 142

 Score = 34.3 bits (77), Expect = 0.40
 Identities = 24/65 (36%), Positives = 31/65 (46%)
 Frame = +1

Query: 145 ASQESPQSSLSHSGHSPEMASSGPERRLDTHSSSSSSGDRQASGQHATCSPMSIGTVDSS 324
           +S  SP SS S S  SP  +SS P     + SSSSSS    +S    + S  S  +  SS
Sbjct: 112 SSSSSPSSSSSSSSSSPSSSSSSP-----SSSSSSSSSSPSSSSSSPSSSSSSSSSSSSS 166

Query: 325 EQPTS 339
              +S
Sbjct: 167 PSSSS 171

 Score = 33.1 bits (74), Expect = 0.89
 Identities = 24/69 (34%), Positives = 31/69 (44%)
 Frame = +1

Query: 145 ASQESPQSSLSHSGHSPEMASSGPERRLDTHSSSSSSGDRQASGQHATCSPMSIGTVDSS 324
           +S  SP SS S S  S   +SS P     T S SSSS    +S   +  S  S     SS
Sbjct: 60  SSSSSPSSSPSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSPSSSNSSSSS-----SS 114

Query: 325 EQPTSKRAA 351
             P+S  ++
Sbjct: 115 SSPSSSSSS 123

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 23/68 (33%), Positives = 32/68 (46%)
 Frame = +1

Query: 148 SQESPQSSLSHSGHSPEMASSGPERRLDTHSSSSSSGDRQASGQHATCSPMSIGTVDSSE 327
           S  SP SS S S  S   ++S P     + SSSSSS     S   ++ S  S  +  SS 
Sbjct: 70  SSSSPSSSHSSSSPSSSSSTSSPS---SSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSS 126

Query: 328 QPTSKRAA 351
            P+S  ++
Sbjct: 127 SPSSSSSS 134

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 22/74 (29%), Positives = 32/74 (42%)
 Frame = +1

Query: 118 ADQPRAAWRASQESPQSSLSHSGHSPEMASSGPERRLDTHSSSSSSGDRQASGQHATCSP 297
           +  P ++  +S  S  SS S    S   +SS P     + SSSSSS    +S   ++ S 
Sbjct: 71  SSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSS 130

Query: 298 MSIGTVDSSEQPTS 339
            S     SS   +S
Sbjct: 131 SSSSPSSSSSSSSS 144

>ref|NP_872435.1| hypothetical protein FLJ35107 [Homo sapiens]
           gi|21751020|dbj|BAC03887.1| unnamed protein product
           [Homo sapiens] gi|33872427|gb|AAH16304.1| FLJ35107
           protein [Homo sapiens]
          Length = 258

 Score = 38.9 bits (89), Expect = 0.016
 Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 2/146 (1%)
 Frame = +1

Query: 13  NTTQHETSAAANTTQHNRHKMGKHGHRVNKTTTQLADQPRAAWRASQESPQSSLSHSGHS 192
           ++T   +S++++++  +           + + +  +    ++  +S  SP SS S S  S
Sbjct: 87  SSTSSPSSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSS 146

Query: 193 PEMASSGPERRLDTHSSSSSSGDRQASGQHATCSPMSIGT--VDSSEQPTSKRAADWLRS 366
           P  +SS P     + SSSSSS    +S   +  SP S  +    SS  P+S  ++   RS
Sbjct: 147 PSSSSSSPSSS-SSSSSSSSSSPSSSSPSSSGSSPSSSNSSPSSSSSSPSSSSSSPSPRS 205

Query: 367 IKLRLQFSTSLIVDALANTDTLPASS 444
                  S++      + + + P+SS
Sbjct: 206 SSPSSSSSSTSSPSTSSPSSSSPSSS 231

 Score = 35.8 bits (81), Expect = 0.14
 Identities = 23/69 (33%), Positives = 32/69 (46%)
 Frame = +1

Query: 145 ASQESPQSSLSHSGHSPEMASSGPERRLDTHSSSSSSGDRQASGQHATCSPMSIGTVDSS 324
           +S  S   S SHS  SP  +SS       + SSSSSS     S   ++ S  S  +  SS
Sbjct: 67  SSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSS 126

Query: 325 EQPTSKRAA 351
             P+S  ++
Sbjct: 127 SSPSSSSSS 135

 Score = 33.1 bits (74), Expect = 0.89
 Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 7/110 (6%)
 Frame = +1

Query: 31  TSAAANTTQHNRHKMGKHGHRVNKTTTQLADQPRAAWRASQESPQSSLSHS-------GH 189
           +S++ +++  +      H      +++  +    ++  +S  SP SS S S         
Sbjct: 61  SSSSPSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSSPSSSNSSSSSSSSSPSS 120

Query: 190 SPEMASSGPERRLDTHSSSSSSGDRQASGQHATCSPMSIGTVDSSEQPTS 339
           S   +SS P     + SSSSSS     S   ++ S  S  +  SS  P+S
Sbjct: 121 SSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSS 170

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 21/62 (33%), Positives = 28/62 (44%)
 Frame = +1

Query: 166 SSLSHSGHSPEMASSGPERRLDTHSSSSSSGDRQASGQHATCSPMSIGTVDSSEQPTSKR 345
           S LS S  S   +SS P     + S SSS      S   +T SP S  +  SS  P+S  
Sbjct: 49  SILSSSIPSSSSSSSSPSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSSPSSSN 108

Query: 346 AA 351
           ++
Sbjct: 109 SS 110

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
 Frame = +1

Query: 148 SQESPQSSLSHSGHSPEMASSGPERRLDTHSSSS-----SSGDRQASGQHATCSPMSIGT 312
           S  SP SS S S  S   ++S P     + SSSS     SS    +S   ++ S  S   
Sbjct: 70  SSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSP 129

Query: 313 VDSSEQPTSKRAA 351
             SS  P+S  ++
Sbjct: 130 SSSSSSPSSSSSS 142

 Score = 30.8 bits (68), Expect = 4.4
 Identities = 24/71 (33%), Positives = 31/71 (42%), Gaps = 2/71 (2%)
 Frame = +1

Query: 145 ASQESPQSSLSHSGHSPEMASSGPERRLDTHS--SSSSSGDRQASGQHATCSPMSIGTVD 318
           +S  S  SS S S  SP  +SS P     + S  SSS S    ++   +T SP S     
Sbjct: 171 SSPSSSGSSPSSSNSSPSSSSSSPSSSSSSPSPRSSSPSSSSSSTSSPSTSSPSSSSPSS 230

Query: 319 SSEQPTSKRAA 351
           SS   +   AA
Sbjct: 231 SSPSSSCPSAA 241

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 22/69 (31%), Positives = 32/69 (45%)
 Frame = +1

Query: 145 ASQESPQSSLSHSGHSPEMASSGPERRLDTHSSSSSSGDRQASGQHATCSPMSIGTVDSS 324
           +S  S  SS S S  S   +SS       + S SSSS    +S   ++ SP S  +  SS
Sbjct: 86  SSSTSSPSSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSS-SSS 144

Query: 325 EQPTSKRAA 351
             P+S  ++
Sbjct: 145 SSPSSSSSS 153

 Score = 29.6 bits (65), Expect = 9.8
 Identities = 23/67 (34%), Positives = 29/67 (42%), Gaps = 2/67 (2%)
 Frame = +1

Query: 145 ASQESPQSSLSHSGHSPEMASSGPERRLDTHS--SSSSSGDRQASGQHATCSPMSIGTVD 318
           +S  SP SS S S  S   +SS P     T S  SSSSS    +     + S  S  +  
Sbjct: 60  SSSSSPSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSSPSSSNSSSSSSSSSPS 119

Query: 319 SSEQPTS 339
           SS   +S
Sbjct: 120 SSSSSSS 126

>sp|Q06990|ASPX_PAPHA Acrosomal protein SP-10 precursor (Acrosomal vesicle protein-1)
           gi|2134584|pir||I77964 SP-10 - western baboon
           gi|298488|gb|AAB25692.1| SP-10 [Papio hamadryas]
          Length = 285

 Score = 38.9 bits (89), Expect = 0.016
 Identities = 33/121 (27%), Positives = 49/121 (40%), Gaps = 12/121 (9%)
 Frame = +1

Query: 25  HETSAAANT-TQHNRHKMGKHGHRVNKTTT-------QLADQPRAAWRASQESPQSSLSH 180
           +ET++  NT ++H   + G   H V + T          + +P A   A  E        
Sbjct: 56  YETASGLNTLSEHGSSEHGSREHTVAEHTPGEHAESEHASGEPAATGHAEGEHTVGE-QP 114

Query: 181 SGHSPEMASSGPERRLDTHSSSSSSGDRQASGQHATCSPMS----IGTVDSSEQPTSKRA 348
           SG  P       E+ L  H+S     D Q SG+HA+    S     G   S EQP+ + A
Sbjct: 115 SGEQPSGEHLSGEQSLGEHASGEQPSDEQLSGEHASGEQPSGEHASGEQPSGEQPSGEHA 174

Query: 349 A 351
           +
Sbjct: 175 S 175

>emb|CAB91473.2| related to a-agglutinin core protein AGA1 [Neurospora crassa]
          Length = 550

 Score = 38.9 bits (89), Expect = 0.016
 Identities = 33/124 (26%), Positives = 47/124 (37%), Gaps = 13/124 (10%)
 Frame = +1

Query: 25  HETSAAANTTQHNRHKMGKHGHRVNKTTT---QLADQPRAAWRASQESPQSSLSHSGHSP 195
           H TS+ + T  H+      H H ++ + +    L   PR A   +   PQ     S  S 
Sbjct: 157 HPTSSHSTTHSHSHSHSHSHSHSLSHSRSYWKDLVHDPRRAHGGASPPPQHDGQQSNRSS 216

Query: 196 EMASSGPERRLDTHSSSSSSGDRQASGQHATCSPMSIGTVDSSE----------QPTSKR 345
           + +   P   L T    S +  R AS      SP+   T DSS            PT+  
Sbjct: 217 KTSGLLP---LHTFGWQSETSSRSASSSTVADSPIDGFTDDSSSGYPSGNEPMTPPTTPP 273

Query: 346 AADW 357
           +ADW
Sbjct: 274 SADW 277

>ref|XP_325290.1| hypothetical protein ( related to a-agglutinin core protein AGA1
           [imported] - Neurospora crassa ) gi|11359608|pir||T49672
           related to a-agglutinin core protein AGA1 [imported] -
           Neurospora crassa gi|28924930|gb|EAA34022.1|
           hypothetical protein ( related to a-agglutinin core
           protein AGA1 [imported] - Neurospora crassa )
          Length = 590

 Score = 38.9 bits (89), Expect = 0.016
 Identities = 33/124 (26%), Positives = 47/124 (37%), Gaps = 13/124 (10%)
 Frame = +1

Query: 25  HETSAAANTTQHNRHKMGKHGHRVNKTTT---QLADQPRAAWRASQESPQSSLSHSGHSP 195
           H TS+ + T  H+      H H ++ + +    L   PR A   +   PQ     S  S 
Sbjct: 190 HPTSSHSTTHSHSHSHSHSHSHSLSHSRSYWKDLVHDPRRAHGGASPPPQHDGQQSNRSS 249

Query: 196 EMASSGPERRLDTHSSSSSSGDRQASGQHATCSPMSIGTVDSSE----------QPTSKR 345
           + +   P   L T    S +  R AS      SP+   T DSS            PT+  
Sbjct: 250 KTSGLLP---LHTFGWQSETSSRSASSSTVADSPIDGFTDDSSSGYPSGNEPMTPPTTPP 306

Query: 346 AADW 357
           +ADW
Sbjct: 307 SADW 310



EST assemble image


clone accession position
1 HC083c08_r AV638209 1 444
2 MXL033g05_r BP094979 22 408
3 MX224f03_r BP090483 97 395




Chlamydomonas reinhardtii
Kazusa DNA Research Institute