KCC002126A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002126A_C01 KCC002126A_c01
ctaaggttacatacaatGCTTCAGCGTAGCGCCCTGCTGCCCGCTGCGGGCGGAGCCCCT
CACCTGCGACCTGTGCCCCTCGCGGCGCCTTTCAAGCCAGCCACCGTTGCCACAAGTCAA
AAATGCAAAATTAATTACCGAGGCTCGCTCCAATCGGCACACTCAACAGCGACCGCAGAA
CTTGCGGGAGGCTTGACGGCGTCCGCAGCGTTGCTGGAGGAAAATGAGACGGAGGCATCT
ACATACTGCGGGAGCGAGGGCCAGGTACTGGTGCGCCCCGCGCCGGAGGGCATTGCGCCC
AATGGCAAGAAGTACTTCATCCACACCTTCGGCTGCCAGATGAACATGGCTGACAGCGAG
CGCATGGCGGGAGTGCTGGAGAGTGTGGGCTATGTGGGCAGTGAGGACGCGAGCGAGGCG
GATGTGTTGATCTACAACACCTGCTCAATCCGCGAGAAGGCGGAGCAGAAGGTGTACAGC
GCGCTGGGCAAGCAGGCCAAACGCAAGCGGGAGCGGGCT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002126A_C01 KCC002126A_c01
         (519 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|ZP_00071257.1| COG0621: 2-methylthioadenine synthetase [Tric...   103  2e-21
ref|NP_485355.1| hypothetical protein [Nostoc sp. PCC 7120] gi|2...   102  4e-21
ref|ZP_00111017.1| COG0621: 2-methylthioadenine synthetase [Nost...   101  7e-21
ref|NP_440473.1| hypothetical protein [Synechocystis sp. PCC 680...    98  6e-20
ref|NP_897733.1| 2-methylthioadenine synthetase [Synechococcus s...    98  6e-20

>ref|ZP_00071257.1| COG0621: 2-methylthioadenine synthetase [Trichodesmium erythraeum
           IMS101]
          Length = 451

 Score =  103 bits (256), Expect = 2e-21
 Identities = 45/72 (62%), Positives = 61/72 (84%)
 Frame = +1

Query: 301 NGKKYFIHTFGCQMNMADSERMAGVLESVGYVGSEDASEADVLIYNTCSIREKAEQKVYS 480
           N + Y I TFGCQMN ADSERMAG+L+++G + SED ++AD+++YNTC+IR+ AEQKVYS
Sbjct: 4   NNRHYHITTFGCQMNKADSERMAGILDNMGLISSEDPNKADIILYNTCTIRDNAEQKVYS 63

Query: 481 ALGKQAKRKRER 516
            LG+QAKRK ++
Sbjct: 64  YLGRQAKRKHKQ 75

>ref|NP_485355.1| hypothetical protein [Nostoc sp. PCC 7120] gi|25305471|pir||AE1970
           hypothetical protein alr1312 [imported] - Nostoc sp.
           (strain PCC 7120) gi|17130659|dbj|BAB73269.1|
           ORF_ID:alr1312~hypothetical protein [Nostoc sp. PCC
           7120]
          Length = 454

 Score =  102 bits (253), Expect = 4e-21
 Identities = 46/72 (63%), Positives = 60/72 (82%)
 Frame = +1

Query: 301 NGKKYFIHTFGCQMNMADSERMAGVLESVGYVGSEDASEADVLIYNTCSIREKAEQKVYS 480
           + ++Y I TFGCQMN ADSERMAG+LE +G+  SED + AD+++YNTC+IR+ AEQKVYS
Sbjct: 4   SNRRYHITTFGCQMNKADSERMAGILEDMGFKFSEDPNNADLILYNTCTIRDNAEQKVYS 63

Query: 481 ALGKQAKRKRER 516
            LG+QAKRK E+
Sbjct: 64  YLGRQAKRKHEQ 75

>ref|ZP_00111017.1| COG0621: 2-methylthioadenine synthetase [Nostoc punctiforme]
          Length = 454

 Score =  101 bits (251), Expect = 7e-21
 Identities = 47/70 (67%), Positives = 58/70 (82%)
 Frame = +1

Query: 307 KKYFIHTFGCQMNMADSERMAGVLESVGYVGSEDASEADVLIYNTCSIREKAEQKVYSAL 486
           + Y I TFGCQMN ADSERMAGVLE +G+  SED + ADV++YNTC+IR+ AEQKVYS L
Sbjct: 6   RHYHITTFGCQMNKADSERMAGVLEDMGFEWSEDPNNADVILYNTCTIRDNAEQKVYSYL 65

Query: 487 GKQAKRKRER 516
           G+QAKRK ++
Sbjct: 66  GRQAKRKHDQ 75

>ref|NP_440473.1| hypothetical protein [Synechocystis sp. PCC 6803]
           gi|2501538|sp|P73127|Y996_SYNY3 Hypothetical protein
           sll0996 gi|7429882|pir||S75239 hypothetical protein -
           Synechocystis sp. (strain PCC 6803)
           gi|1652230|dbj|BAA17153.1| ORF_ID:sll0996~hypothetical
           protein [Synechocystis sp. PCC 6803]
          Length = 451

 Score = 98.2 bits (243), Expect = 6e-20
 Identities = 44/68 (64%), Positives = 59/68 (86%)
 Frame = +1

Query: 307 KKYFIHTFGCQMNMADSERMAGVLESVGYVGSEDASEADVLIYNTCSIREKAEQKVYSAL 486
           ++Y I TFGCQMN ADSERMAG+LE++G   ++D ++AD+++YNTCSIR+ AEQKVYS L
Sbjct: 6   RRYHIITFGCQMNKADSERMAGILENLGMTYTDDPNQADLVLYNTCSIRDNAEQKVYSYL 65

Query: 487 GKQAKRKR 510
           G+QAKRK+
Sbjct: 66  GRQAKRKQ 73

>ref|NP_897733.1| 2-methylthioadenine synthetase [Synechococcus sp. WH 8102]
           gi|33639149|emb|CAE08155.1| 2-methylthioadenine
           synthetase [Synechococcus sp. WH 8102]
          Length = 460

 Score = 98.2 bits (243), Expect = 6e-20
 Identities = 47/76 (61%), Positives = 59/76 (76%)
 Frame = +1

Query: 283 PEGIAPNGKKYFIHTFGCQMNMADSERMAGVLESVGYVGSEDASEADVLIYNTCSIREKA 462
           P   A +   Y+I TFGCQMN ADSERMAG+LES+GY  +    EAD+++YNTC+IR+ A
Sbjct: 2   PAANAQSRGSYWITTFGCQMNKADSERMAGILESMGYRAANAELEADLVLYNTCTIRDNA 61

Query: 463 EQKVYSALGKQAKRKR 510
           EQKVYS LG+QA+RKR
Sbjct: 62  EQKVYSYLGRQAQRKR 77



EST assemble image


clone accession position
1 HC079h12_r AV637959 1 519
2 HCL056a11_r AV642686 18 514




Chlamydomonas reinhardtii
Kazusa DNA Research Institute