KCC002117A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002117A_C01 KCC002117A_c01
cccttcggtcaactggctcatctcctactccaagtacaccaagtccctggagcccttcta
cgacaagttcgaccccgagtTCGTGCAGCTGCGCACGGTGTTCCGCGAGGTGCTGCAGAA
GGAGGATGAGCTGAACGAGATCGTGCAGCTGGTGGGCAAGGACGCGCTGGCGGAGACGGA
CAAGATCGTGCTGGAGACGGCCCGCTTCATCAAGGACGACTACCTGCAGCAGAACTCGTT
CACCAAGTACGACAAGTACTGCCCCTTCTACAAGTCCGTGGAGATGATGCGCAACATCTC
CACCTTCCACCGCCTGGCCACCGCCGCCATCGAGAAGACGGCAGCCGGCAACGCCGAGGG
CCAGAAGATCACGCTCAACGTGATCAAGCAGCGCATGGGCGACACCCTCTACAAGCTGAC
CTCGCAGAAGTTCGAGGACCCGGCCGAGGGCGAGGAGGTGGTGCGCCGCAAGCTCAAGGC
GGTGTACGAGGAGCTGCACGACCGCTTCCGCGCCCTGGAGGACGAGTTCCGGTAATCGGA
GCGCCACGCGGGCGGGTGCTGACCGGAGCTAGCTGCGTAGCTGCGCGGACTGGAGCCTAG
CCCTAGCACTGGGGCTTGGAGCCGGAGCTGG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002117A_C01 KCC002117A_c01
         (631 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|Q38676|VAA1_ACEAT Vacuolar ATP synthase catalytic subunit A i...   280  9e-75
sp|Q38677|VAA2_ACEAT Vacuolar ATP synthase catalytic subunit A i...   268  5e-71
gb|AAF24768.1|AF218356_1 vacuolar H+-ATPase catalytic subunit [A...   238  4e-62
gb|AAC17840.1| vacuolar H+-ATPase catalytic subunit [Gossypium h...   237  9e-62
sp|P31405|VATA_GOSHI Vacuolar ATP synthase catalytic subunit A (...   237  9e-62

>sp|Q38676|VAA1_ACEAT Vacuolar ATP synthase catalytic subunit A isoform 1 (V-ATPase A
           subunit 1) (Vacuolar proton pump alpha subunit 1)
           (V-ATPase 69 kDa subunit 1) gi|1303673|dbj|BAA09097.1|
           adenosine triphosphatase A subunit [Acetabularia
           acetabulum]
          Length = 613

 Score =  280 bits (717), Expect = 9e-75
 Identities = 136/177 (76%), Positives = 156/177 (87%)
 Frame = +2

Query: 2   PSVNWLISYSKYTKSLEPFYDKFDPEFVQLRTVFREVLQKEDELNEIVQLVGKDALAETD 181
           PSVNWLISYSKY  +LEPFY+KFD +FV LR V REVLQKEDELNEIVQLVGKDALAE+D
Sbjct: 437 PSVNWLISYSKYLNALEPFYEKFDSDFVTLRQVAREVLQKEDELNEIVQLVGKDALAESD 496

Query: 182 KIVLETARFIKDDYLQQNSFTKYDKYCPFYKSVEMMRNISTFHRLATAAIEKTAAGNAEG 361
           KI+LETARF+K+DYLQQNSFTKYDKYCPFYKSV MMRNI TFHRLAT AIE+TAAGN +G
Sbjct: 497 KIILETARFLKEDYLQQNSFTKYDKYCPFYKSVGMMRNIVTFHRLATQAIERTAAGNVDG 556

Query: 362 QKITLNVIKQRMGDTLYKLTSQKFEDPAEGEEVVRRKLKAVYEELHDRFRALEDEFR 532
           QKIT N+IK ++GD LYK++SQKFEDP++GE VV   L  + EEL ++FRALEDE+R
Sbjct: 557 QKITFNIIKAKLGDLLYKVSSQKFEDPSDGEGVVTAHLNELNEELKEKFRALEDEYR 613

>sp|Q38677|VAA2_ACEAT Vacuolar ATP synthase catalytic subunit A isoform 2 (V-ATPase A
           subunit 2) (Vacuolar proton pump alpha subunit 2)
           (V-ATPase 69 kDa subunit 2) gi|1303679|dbj|BAA09098.1|
           adenosine triphosphatase A subunit [Acetabularia
           acetabulum]
          Length = 613

 Score =  268 bits (685), Expect = 5e-71
 Identities = 128/176 (72%), Positives = 153/176 (86%)
 Frame = +2

Query: 2   PSVNWLISYSKYTKSLEPFYDKFDPEFVQLRTVFREVLQKEDELNEIVQLVGKDALAETD 181
           PSVNWLISYSKY  +LEPFY+KFD +FV +R V REVLQKEDELNEIVQLVGKDALAE+D
Sbjct: 437 PSVNWLISYSKYLNALEPFYEKFDNDFVDIRQVAREVLQKEDELNEIVQLVGKDALAESD 496

Query: 182 KIVLETARFIKDDYLQQNSFTKYDKYCPFYKSVEMMRNISTFHRLATAAIEKTAAGNAEG 361
           KI+LETA F+K+DYL QNSFTKYDKYCPFYKSV MMRNI TFHRLAT AIE+TA GN++G
Sbjct: 497 KIILETADFLKEDYLAQNSFTKYDKYCPFYKSVGMMRNIVTFHRLATQAIERTATGNSDG 556

Query: 362 QKITLNVIKQRMGDTLYKLTSQKFEDPAEGEEVVRRKLKAVYEELHDRFRALEDEF 529
           QK+  N+IK ++GD LYK++SQKFEDP++GE VV  +L  + +EL ++FRALEDE+
Sbjct: 557 QKLLSNIIKAKLGDLLYKVSSQKFEDPSDGESVVTGRLNELNDELKEKFRALEDEY 612

>gb|AAF24768.1|AF218356_1 vacuolar H+-ATPase catalytic subunit [Allium cepa]
          Length = 189

 Score =  238 bits (608), Expect = 4e-62
 Identities = 118/177 (66%), Positives = 144/177 (80%)
 Frame = +2

Query: 2   PSVNWLISYSKYTKSLEPFYDKFDPEFVQLRTVFREVLQKEDELNEIVQLVGKDALAETD 181
           PSVNWLISYSKY+K+LE FYDKFD +F+ +RT  REVLQ+ED+LNEIVQLVGKDALAETD
Sbjct: 15  PSVNWLISYSKYSKALESFYDKFDSDFIDIRTKAREVLQREDDLNEIVQLVGKDALAETD 74

Query: 182 KIVLETARFIKDDYLQQNSFTKYDKYCPFYKSVEMMRNISTFHRLATAAIEKTAAGNAEG 361
           KI LETA+ +++DYL QN+FT YDK+CPFYKSV MMRNI  F+ LA  A+E+ A   ++G
Sbjct: 75  KITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFNTLANQAVERGA--GSDG 132

Query: 362 QKITLNVIKQRMGDTLYKLTSQKFEDPAEGEEVVRRKLKAVYEELHDRFRALEDEFR 532
           QKIT +VIK R+GD  Y+L SQKFEDPAEGE+V+  K K +Y++L   FR LEDE R
Sbjct: 133 QKITYSVIKHRLGDLFYRLVSQKFEDPAEGEDVLVAKFKKLYDDLTVGFRNLEDESR 189

>gb|AAC17840.1| vacuolar H+-ATPase catalytic subunit [Gossypium hirsutum]
          Length = 623

 Score =  237 bits (605), Expect = 9e-62
 Identities = 118/177 (66%), Positives = 142/177 (79%)
 Frame = +2

Query: 2   PSVNWLISYSKYTKSLEPFYDKFDPEFVQLRTVFREVLQKEDELNEIVQLVGKDALAETD 181
           PSVNWLISYSKY+ +LE FY+KFDP+F+ +RT  REVLQ+ED+LNEIVQLVGKDALAETD
Sbjct: 449 PSVNWLISYSKYSGALESFYEKFDPDFISIRTKAREVLQREDDLNEIVQLVGKDALAETD 508

Query: 182 KIVLETARFIKDDYLQQNSFTKYDKYCPFYKSVEMMRNISTFHRLATAAIEKTAAGNAEG 361
           KI LETA+ +++DYL QN+FT YDK+CPFYKSV MMRNI  F+ LA  A+EK  A   +G
Sbjct: 509 KITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIVHFNALANQAVEK--AAGMDG 566

Query: 362 QKITLNVIKQRMGDTLYKLTSQKFEDPAEGEEVVRRKLKAVYEELHDRFRALEDEFR 532
           QKIT ++IK R+GD  Y+L SQKFEDPAEGEE +  K K + E+L   FRALEDE R
Sbjct: 567 QKITYSLIKHRLGDLFYRLVSQKFEDPAEGEEALVAKFKKLNEDLTAGFRALEDETR 623

>sp|P31405|VATA_GOSHI Vacuolar ATP synthase catalytic subunit A (V-ATPase A subunit)
           (Vacuolar proton pump alpha subunit) (V-ATPase 69 kDa
           subunit) gi|167313|gb|AAA33050.1| vacuolar H+-ATPase
           catalytic subunit
          Length = 623

 Score =  237 bits (605), Expect = 9e-62
 Identities = 118/177 (66%), Positives = 142/177 (79%)
 Frame = +2

Query: 2   PSVNWLISYSKYTKSLEPFYDKFDPEFVQLRTVFREVLQKEDELNEIVQLVGKDALAETD 181
           PSVNWLISYSKY+ +LE FY+KFDP+F+ +RT  REVLQ+ED+LNEIVQLVGKDALAETD
Sbjct: 449 PSVNWLISYSKYSGALESFYEKFDPDFISIRTKAREVLQREDDLNEIVQLVGKDALAETD 508

Query: 182 KIVLETARFIKDDYLQQNSFTKYDKYCPFYKSVEMMRNISTFHRLATAAIEKTAAGNAEG 361
           KI LETA+ +++DYL QN+FT YDK+CPFYKSV MMRNI  F+ LA  A+EK  A   +G
Sbjct: 509 KITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIVHFNALANQAVEK--AAGMDG 566

Query: 362 QKITLNVIKQRMGDTLYKLTSQKFEDPAEGEEVVRRKLKAVYEELHDRFRALEDEFR 532
           QKIT ++IK R+GD  Y+L SQKFEDPAEGEE +  K K + E+L   FRALEDE R
Sbjct: 567 QKITYSLIKHRLGDLFYRLVSQKFEDPAEGEEALVAKFKKLNEDLTAGFRALEDETR 623



EST assemble image


clone accession position
1 LC002f10_r AV619019 1 516
2 HC076f01_r AV637714 201 631




Chlamydomonas reinhardtii
Kazusa DNA Research Institute