Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002082A_C01 KCC002082A_c01
(533 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF64189.1|AF245292_1 plastid-specific ribosomal protein 6 pr... 46 3e-04
sp|P11892|RK25_PEA 50S RIBOSOMAL PROTEIN CL25, CHLOROPLAST PRECU... 45 5e-04
ref|NP_060750.1| hypothetical protein FLJ10945 [Homo sapiens] gi... 43 0.002
gb|AAA59163.1| mucin 42 0.004
pir||A43932 mucin 2 precursor, intestinal - human (fragments) 42 0.004
>gb|AAF64189.1|AF245292_1 plastid-specific ribosomal protein 6 precursor [Spinacia oleracea]
Length = 116
Score = 46.2 bits (108), Expect = 3e-04
Identities = 22/48 (45%), Positives = 28/48 (57%)
Frame = +3
Query: 96 ASQPRHKGAKHHARSRPIKYNRADKNHGPAKYEPLPTPPPALIVVSKA 239
+S+P+ KG HH ++RP K R D GPA Y PLP P +VS A
Sbjct: 48 SSRPQKKGTAHHMKTRPKKTARWDIKRGPAVYPPLPPLPAEWTIVSSA 95
>sp|P11892|RK25_PEA 50S RIBOSOMAL PROTEIN CL25, CHLOROPLAST PRECURSOR
gi|71308|pir||R5PM25 ribosomal protein PsCL25 precursor,
chloroplast - garden pea gi|20877|emb|CAA32187.1|
unnamed protein product [Pisum sativum]
Length = 104
Score = 45.4 bits (106), Expect = 5e-04
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +3
Query: 63 SAVSSRNVACQASQPRHKGAKHHARSRPIKYNRADKNHGPAKYEPLPTPPPALIVVSKAE 242
SA + C +S+P+ K HH ++RP K +D+N P Y PLP PP +V A+
Sbjct: 31 SACGGLLIEC-SSRPQKKSTAHHMKTRPRKSRLSDRNRKPTVYAPLPPLPPDFTIVIPAD 89
Query: 243 S 245
+
Sbjct: 90 A 90
>ref|NP_060750.1| hypothetical protein FLJ10945 [Homo sapiens]
gi|7023308|dbj|BAA91920.1| unnamed protein product [Homo
sapiens]
Length = 138
Score = 43.1 bits (100), Expect = 0.002
Identities = 43/111 (38%), Positives = 49/111 (43%), Gaps = 13/111 (11%)
Frame = +1
Query: 7 PLSLT--WASPPS*QAPCSLCRPSLPATWLARLPSPATR-VPST-TRARAPLST----TA 162
P S T W PP LC P LPA+ P+PATR P RAR P S T
Sbjct: 2 PASATAAWHCPP-------LCLPPLPASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTR 54
Query: 163 RTRTTGLPSTSP----CPPLPRPLLWSPR-PSPSKRLTALA*AAVWHGARL 300
T P + P P P P+L +PR P P+ R A WHGARL
Sbjct: 55 GALTFWAPGSWPRVLLVPRSPGPVLRAPRLPHPAARARRRA----WHGARL 101
>gb|AAA59163.1| mucin
Length = 1270
Score = 42.4 bits (98), Expect = 0.004
Identities = 30/87 (34%), Positives = 36/87 (40%), Gaps = 5/87 (5%)
Frame = +1
Query: 16 LTWASPPS*QAPCSLCRPSLPATWLARLPSPATRVPSTTRARAPLSTTA-----RTRTTG 180
+T SPP+ PS P T LP T P TT P TT T TT
Sbjct: 771 ITTPSPPT-------TTPSPPPTTTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTP 823
Query: 181 LPSTSPCPPLPRPLLWSPRPSPSKRLT 261
LP+T+P PP+ P +PS T
Sbjct: 824 LPTTTPSPPISTTTTPPPTTTPSPPTT 850
Score = 37.7 bits (86), Expect = 0.095
Identities = 25/70 (35%), Positives = 28/70 (39%), Gaps = 5/70 (7%)
Frame = +1
Query: 67 PSLPATWLARLPSPATRVPSTTRARAPLSTTA-----RTRTTGLPSTSPCPPLPRPLLWS 231
PS P T P T P T PL TT T TT P+T+P PP P +
Sbjct: 797 PSPPTTTTTTPPPTTTPSPPITTTTTPLPTTTPSPPISTTTTPPPTTTPSPPTTTPSPPT 856
Query: 232 PRPSPSKRLT 261
PSP T
Sbjct: 857 TTPSPPTTTT 866
Score = 36.6 bits (83), Expect = 0.21
Identities = 28/88 (31%), Positives = 37/88 (41%), Gaps = 3/88 (3%)
Frame = +1
Query: 7 PLSLTWASPPS*QAPCSLCRPSLPATWLARLPSPATRVPSTTRARAPLST--TARTRTTG 180
P+S T PP+ PS P T + + T P TT P++T T TT
Sbjct: 832 PISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPITPPASTTT 891
Query: 181 L-PSTSPCPPLPRPLLWSPRPSPSKRLT 261
L P+T+P PP P +PS T
Sbjct: 892 LPPTTTPSPPTTTTTTPPPTTTPSPPTT 919
Score = 35.0 bits (79), Expect = 0.61
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +1
Query: 1 T*PLSLTWASPPS*QA-PCSLCRPSLPATWLARLPSPATRVPSTTRARAPLSTTARTRTT 177
T P + T + PP+ P PS P T P+ T P T +P +TT TT
Sbjct: 930 TLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTT---TT 986
Query: 178 GLPSTSPCPPLPRPL 222
P+T+P PP P+
Sbjct: 987 PPPTTTPSPPTTTPI 1001
Score = 35.0 bits (79), Expect = 0.61
Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +1
Query: 7 PLSLTWASPP--S*QAPCSLCRPSLPATWLARLPSPATRVPS-TTRARAPLSTTARTRTT 177
P + T SPP + P PS P T P+ PS TT +P++TT TT
Sbjct: 1034 PPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTT----TT 1089
Query: 178 GLPSTSPCPPLPRPLLWSPRPSPSKRLTAL 267
+T+P PP SP +PS T +
Sbjct: 1090 PSSTTTPSPPPTTMTTPSPTTTPSPPTTTM 1119
Score = 33.5 bits (75), Expect = 1.8
Identities = 28/87 (32%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
Frame = +1
Query: 7 PLSLTWASPPS*QA--PCSLCRPSLPATWLARLPSPATRVPSTTRARAPLSTTARTRTTG 180
P + T SPP+ P PS P T P T P TT P ++T TT
Sbjct: 955 PPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTST----TTL 1010
Query: 181 LPSTSPCPPLPRPLLWSPRPSPSKRLT 261
P+T+P PP P +PS T
Sbjct: 1011 PPTTTPSPPPTTTTTPPPTTTPSPPTT 1037
Score = 33.5 bits (75), Expect = 1.8
Identities = 31/94 (32%), Positives = 41/94 (42%), Gaps = 7/94 (7%)
Frame = +1
Query: 1 T*PLSLTWASPPS*QA--PCSLCRPSLPATWLARLPSPATRVP-STTRARAPLSTTARTR 171
T P T SPP+ P PS P T P+ T +P +TT + P +TT
Sbjct: 969 TTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPP 1028
Query: 172 TTGLPS----TSPCPPLPRPLLWSPRPSPSKRLT 261
TT PS T+P PP+ P +PS +T
Sbjct: 1029 TT-TPSPPTTTTPSPPITTTTTPPPTTTPSSPIT 1061
Score = 33.5 bits (75), Expect = 1.8
Identities = 28/86 (32%), Positives = 32/86 (36%), Gaps = 12/86 (13%)
Frame = +1
Query: 1 T*PLSLTWASPPS*QAPCSLCRPSLPATWLARLPSPAT-RVPSTTRARAPLSTT------ 159
T P T SPP+ PS P T P T P TT P STT
Sbjct: 837 TTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPITPPASTTTLPPTT 896
Query: 160 -----ARTRTTGLPSTSPCPPLPRPL 222
T TT P+T+P PP P+
Sbjct: 897 TPSPPTTTTTTPPPTTTPSPPTTTPI 922
Score = 33.1 bits (74), Expect = 2.3
Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Frame = +1
Query: 67 PSLPATWLARLPSPATR-VPSTTRARAPLSTTARTRTTGLPS----TSPCPPLPRPLLWS 231
PS P T P T P+TT P++TT T PS T+P PP S
Sbjct: 1016 PSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPS 1075
Query: 232 PRPSPSKRLT 261
P +PS +T
Sbjct: 1076 PTTTPSSPIT 1085
Score = 32.7 bits (73), Expect = 3.1
Identities = 33/107 (30%), Positives = 41/107 (37%), Gaps = 8/107 (7%)
Frame = +1
Query: 49 PCSLCRPSLPATWLARLPSPATRV--PSTTRARAPLSTTARTRTTGLPSTSPCPPLPRPL 222
P S PS P T + PSP T P+TT P +TT+ T T+P PP P
Sbjct: 1090 PSSTTTPSPPPTTMTT-PSPTTTPSPPTTTMTTLPPTTTSSPLT-----TTPLPPSITPP 1143
Query: 223 LWSPRPSPSKRLTALA*AAVWHG------ARLQEAGRACSLTADTCG 345
+SP S + T W G + G L D CG
Sbjct: 1144 TFSPF-STTTPTTPCVPLCNWTGWLDSGKPNFHKPGGDTELIGDVCG 1189
Score = 32.7 bits (73), Expect = 3.1
Identities = 28/97 (28%), Positives = 34/97 (34%), Gaps = 12/97 (12%)
Frame = +1
Query: 7 PLSLTWASPPS*QAPCSLCRPSLPATWLARLPSPATRVPSTTRARAPLSTTAR------- 165
P + T PP+ + P P LP T P TT P TT
Sbjct: 862 PTTTTTTPPPTTTPSPPMTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTP 921
Query: 166 ----TRTTGLP-STSPCPPLPRPLLWSPRPSPSKRLT 261
T TT LP +T+P PP P +PS T
Sbjct: 922 ITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTT 958
Score = 31.6 bits (70), Expect = 6.8
Identities = 25/84 (29%), Positives = 31/84 (36%), Gaps = 5/84 (5%)
Frame = +1
Query: 7 PLSLTWASPPS*QAPCSLCRPSLPATWLARLPSPATRVPSTTRARAPLSTTARTRTTGLP 186
P + T P + +P + PS P P T P TT P TT + T P
Sbjct: 941 PTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTP 1000
Query: 187 STSPC-----PPLPRPLLWSPRPS 243
T P PP P SP P+
Sbjct: 1001 ITPPTSTTTLPPTTTP---SPPPT 1021
Score = 31.6 bits (70), Expect = 6.8
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 5/86 (5%)
Frame = +1
Query: 19 TWASPPS*QA--PCSLCRPSLPATWLAR-LPSPATRVPSTTRARAPLSTTAR--TRTTGL 183
T SPP+ P PS P T LP+ P +T P +TT T T
Sbjct: 795 TTPSPPTTTTTTPPPTTTPSPPITTTTTPLPTTTPSPPISTTTTPPPTTTPSPPTTTPSP 854
Query: 184 PSTSPCPPLPRPLLWSPRPSPSKRLT 261
P+T+P PP P +PS +T
Sbjct: 855 PTTTPSPPTTTTTTPPPTTTPSPPMT 880
>pir||A43932 mucin 2 precursor, intestinal - human (fragments)
Length = 3020
Score = 42.4 bits (98), Expect = 0.004
Identities = 30/87 (34%), Positives = 36/87 (40%), Gaps = 5/87 (5%)
Frame = +1
Query: 16 LTWASPPS*QAPCSLCRPSLPATWLARLPSPATRVPSTTRARAPLSTTA-----RTRTTG 180
+T SPP+ PS P T LP T P TT P TT T TT
Sbjct: 1396 ITTPSPPT-------TTPSPPPTTTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTP 1448
Query: 181 LPSTSPCPPLPRPLLWSPRPSPSKRLT 261
LP+T+P PP+ P +PS T
Sbjct: 1449 LPTTTPSPPISTTTTPPPTTTPSPPTT 1475
Score = 37.7 bits (86), Expect = 0.095
Identities = 25/70 (35%), Positives = 28/70 (39%), Gaps = 5/70 (7%)
Frame = +1
Query: 67 PSLPATWLARLPSPATRVPSTTRARAPLSTTA-----RTRTTGLPSTSPCPPLPRPLLWS 231
PS P T P T P T PL TT T TT P+T+P PP P +
Sbjct: 1422 PSPPTTTTTTPPPTTTPSPPITTTTTPLPTTTPSPPISTTTTPPPTTTPSPPTTTPSPPT 1481
Query: 232 PRPSPSKRLT 261
PSP T
Sbjct: 1482 TTPSPPTTTT 1491
Score = 36.6 bits (83), Expect = 0.21
Identities = 28/88 (31%), Positives = 37/88 (41%), Gaps = 3/88 (3%)
Frame = +1
Query: 7 PLSLTWASPPS*QAPCSLCRPSLPATWLARLPSPATRVPSTTRARAPLST--TARTRTTG 180
P+S T PP+ PS P T + + T P TT P++T T TT
Sbjct: 1457 PISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPITPPASTTT 1516
Query: 181 L-PSTSPCPPLPRPLLWSPRPSPSKRLT 261
L P+T+P PP P +PS T
Sbjct: 1517 LPPTTTPSPPTTTTTTPPPTTTPSPPTT 1544
Score = 35.0 bits (79), Expect = 0.61
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +1
Query: 1 T*PLSLTWASPPS*QA-PCSLCRPSLPATWLARLPSPATRVPSTTRARAPLSTTARTRTT 177
T P + T + PP+ P PS P T P+ T P T +P +TT TT
Sbjct: 1555 TLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTT---TT 1611
Query: 178 GLPSTSPCPPLPRPL 222
P+T+P PP P+
Sbjct: 1612 PPPTTTPSPPTTTPI 1626
Score = 35.0 bits (79), Expect = 0.61
Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +1
Query: 7 PLSLTWASPP--S*QAPCSLCRPSLPATWLARLPSPATRVPS-TTRARAPLSTTARTRTT 177
P + T SPP + P PS P T P+ PS TT +P++TT TT
Sbjct: 1659 PPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTT----TT 1714
Query: 178 GLPSTSPCPPLPRPLLWSPRPSPSKRLTAL 267
+T+P PP SP +PS T +
Sbjct: 1715 PSSTTTPSPPPTTMTTPSPTTTPSPPTTTM 1744
Score = 33.5 bits (75), Expect = 1.8
Identities = 28/87 (32%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
Frame = +1
Query: 7 PLSLTWASPPS*QA--PCSLCRPSLPATWLARLPSPATRVPSTTRARAPLSTTARTRTTG 180
P + T SPP+ P PS P T P T P TT P ++T TT
Sbjct: 1580 PPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTST----TTL 1635
Query: 181 LPSTSPCPPLPRPLLWSPRPSPSKRLT 261
P+T+P PP P +PS T
Sbjct: 1636 PPTTTPSPPPTTTTTPPPTTTPSPPTT 1662
Score = 33.5 bits (75), Expect = 1.8
Identities = 31/94 (32%), Positives = 41/94 (42%), Gaps = 7/94 (7%)
Frame = +1
Query: 1 T*PLSLTWASPPS*QA--PCSLCRPSLPATWLARLPSPATRVP-STTRARAPLSTTARTR 171
T P T SPP+ P PS P T P+ T +P +TT + P +TT
Sbjct: 1594 TTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPP 1653
Query: 172 TTGLPS----TSPCPPLPRPLLWSPRPSPSKRLT 261
TT PS T+P PP+ P +PS +T
Sbjct: 1654 TT-TPSPPTTTTPSPPITTTTTPPPTTTPSSPIT 1686
Score = 33.5 bits (75), Expect = 1.8
Identities = 28/86 (32%), Positives = 32/86 (36%), Gaps = 12/86 (13%)
Frame = +1
Query: 1 T*PLSLTWASPPS*QAPCSLCRPSLPATWLARLPSPAT-RVPSTTRARAPLSTT------ 159
T P T SPP+ PS P T P T P TT P STT
Sbjct: 1462 TTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPITPPASTTTLPPTT 1521
Query: 160 -----ARTRTTGLPSTSPCPPLPRPL 222
T TT P+T+P PP P+
Sbjct: 1522 TPSPPTTTTTTPPPTTTPSPPTTTPI 1547
Score = 33.1 bits (74), Expect = 2.3
Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Frame = +1
Query: 67 PSLPATWLARLPSPATR-VPSTTRARAPLSTTARTRTTGLPS----TSPCPPLPRPLLWS 231
PS P T P T P+TT P++TT T PS T+P PP S
Sbjct: 1641 PSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPS 1700
Query: 232 PRPSPSKRLT 261
P +PS +T
Sbjct: 1701 PTTTPSSPIT 1710
Score = 32.7 bits (73), Expect = 3.1
Identities = 33/107 (30%), Positives = 41/107 (37%), Gaps = 8/107 (7%)
Frame = +1
Query: 49 PCSLCRPSLPATWLARLPSPATRV--PSTTRARAPLSTTARTRTTGLPSTSPCPPLPRPL 222
P S PS P T + PSP T P+TT P +TT+ T T+P PP P
Sbjct: 1715 PSSTTTPSPPPTTMTT-PSPTTTPSPPTTTMTTLPPTTTSSPLT-----TTPLPPSITPP 1768
Query: 223 LWSPRPSPSKRLTALA*AAVWHG------ARLQEAGRACSLTADTCG 345
+SP S + T W G + G L D CG
Sbjct: 1769 TFSPF-STTTPTTPCVPLCNWTGWLDSGKPNFHKPGGDTELIGDVCG 1814
Score = 32.7 bits (73), Expect = 3.1
Identities = 28/97 (28%), Positives = 34/97 (34%), Gaps = 12/97 (12%)
Frame = +1
Query: 7 PLSLTWASPPS*QAPCSLCRPSLPATWLARLPSPATRVPSTTRARAPLSTTAR------- 165
P + T PP+ + P P LP T P TT P TT
Sbjct: 1487 PTTTTTTPPPTTTPSPPMTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTP 1546
Query: 166 ----TRTTGLP-STSPCPPLPRPLLWSPRPSPSKRLT 261
T TT LP +T+P PP P +PS T
Sbjct: 1547 ITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTT 1583
Score = 31.6 bits (70), Expect = 6.8
Identities = 25/84 (29%), Positives = 31/84 (36%), Gaps = 5/84 (5%)
Frame = +1
Query: 7 PLSLTWASPPS*QAPCSLCRPSLPATWLARLPSPATRVPSTTRARAPLSTTARTRTTGLP 186
P + T P + +P + PS P P T P TT P TT + T P
Sbjct: 1566 PTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTP 1625
Query: 187 STSPC-----PPLPRPLLWSPRPS 243
T P PP P SP P+
Sbjct: 1626 ITPPTSTTTLPPTTTP---SPPPT 1646
Score = 31.6 bits (70), Expect = 6.8
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 5/86 (5%)
Frame = +1
Query: 19 TWASPPS*QA--PCSLCRPSLPATWLAR-LPSPATRVPSTTRARAPLSTTAR--TRTTGL 183
T SPP+ P PS P T LP+ P +T P +TT T T
Sbjct: 1420 TTPSPPTTTTTTPPPTTTPSPPITTTTTPLPTTTPSPPISTTTTPPPTTTPSPPTTTPSP 1479
Query: 184 PSTSPCPPLPRPLLWSPRPSPSKRLT 261
P+T+P PP P +PS +T
Sbjct: 1480 PTTTPSPPTTTTTTPPPTTTPSPPMT 1505
