KCC002064A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002064A_C01 KCC002064A_c01
caagggctacgtGTCGGAGGAGGAGGCCGGCCGCCGCCTGGCAGCGGTCATCTCTGACCC
CAAGCTGAACAAGTCGGGCGCCTACTGGTCGTGGTCTTCCACCACTGGCTCGTTCGACAA
CCAGGTGTCTGAGGAGGTGGCCGATGACTCCAAGGCCTCCAAGCTGTGGGACATCTCTGC
CAAGCTGGTGGGCCTGAGCGCGTAAGCAACTGCTCGGCCGTCCGGTTTGGTCTGGAGTTT
GACAAAGGCTACCTGCGGTTCGTCTCTGCGCCGCGGTGCTTGGCCTACCCGAACAGTAGT
GGGCTGGAGTGCCAGTGCGATCCAGGAGTGGAGGGCTTGGAGCGCGCATGTTGCCGTGTG
CGTGACAGGAGCCGGCGCAGCGCTGGGTTGCAGGTGTGTGTGTGTGTGCAGGGGCGGACC
CGGGGCAGTTCTAGCATGCGGGCCCATGCGGCTGGCTGTTGTTGCTGTTGGCCGGGGCCC
AATCCTGnGGGGAAATCGATGCGGCGCGGCGCGCCCAG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002064A_C01 KCC002064A_c01
         (518 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|Q39617|POR_CHLRE Protochlorophyllide reductase, chloroplast p...   135  3e-31
dbj|BAC87880.1| Protochlorophyllide reductase chloroplast precur...   101  7e-21
gb|AAC60560.2| NADPH-protochlorophyllide-oxidoreductase; POR [Pi...   100  2e-20
gb|AAF82475.1| light dependent NADH:protochlorophyllide oxidored...   100  2e-20
gb|AAL58280.1|AC068923_22 putative dehydrogenase [Oryza sativa (...    99  3e-20

>sp|Q39617|POR_CHLRE Protochlorophyllide reductase, chloroplast precursor (PCR)
           (NADPH-protochlorophyllide oxidoreductase) (POR)
           gi|7484402|pir||S71468 protochlorophyllide reductase (EC
           1.3.1.33) precursor - Chlamydomonas reinhardtii
           gi|1408176|gb|AAB04951.1| NADPH:protochlorophyllide
           oxidoreductase
          Length = 397

 Score =  135 bits (340), Expect = 3e-31
 Identities = 67/67 (100%), Positives = 67/67 (100%)
 Frame = +2

Query: 2   KGYVSEEEAGRRLAAVISDPKLNKSGAYWSWSSTTGSFDNQVSEEVADDSKASKLWDISA 181
           KGYVSEEEAGRRLAAVISDPKLNKSGAYWSWSSTTGSFDNQVSEEVADDSKASKLWDISA
Sbjct: 331 KGYVSEEEAGRRLAAVISDPKLNKSGAYWSWSSTTGSFDNQVSEEVADDSKASKLWDISA 390

Query: 182 KLVGLSA 202
           KLVGLSA
Sbjct: 391 KLVGLSA 397

>dbj|BAC87880.1| Protochlorophyllide reductase chloroplast precursor [Physcomitrella
           patens subsp. patens]
          Length = 402

 Score =  101 bits (251), Expect = 7e-21
 Identities = 43/66 (65%), Positives = 57/66 (86%)
 Frame = +2

Query: 2   KGYVSEEEAGRRLAAVISDPKLNKSGAYWSWSSTTGSFDNQVSEEVADDSKASKLWDISA 181
           KGYVSEEE+GRRLA V+SDP +NKSG YWSW++ +GSF+N++S+E +D  KA KLW++S 
Sbjct: 337 KGYVSEEESGRRLAQVVSDPSMNKSGVYWSWNNQSGSFENELSQEASDAEKAKKLWEVSE 396

Query: 182 KLVGLS 199
           KLVGL+
Sbjct: 397 KLVGLA 402

>gb|AAC60560.2| NADPH-protochlorophyllide-oxidoreductase; POR [Pinus mugo]
          Length = 400

 Score = 99.8 bits (247), Expect = 2e-20
 Identities = 44/66 (66%), Positives = 56/66 (84%)
 Frame = +2

Query: 2   KGYVSEEEAGRRLAAVISDPKLNKSGAYWSWSSTTGSFDNQVSEEVADDSKASKLWDISA 181
           KG+VSEEEAG+RLA V+S+P L KSG YWSW++ +GSF+NQ+SEE +D  KA KLW+IS 
Sbjct: 335 KGFVSEEEAGKRLAQVVSNPSLTKSGVYWSWNNNSGSFENQLSEEASDPEKAKKLWEISE 394

Query: 182 KLVGLS 199
           KLVGL+
Sbjct: 395 KLVGLA 400

>gb|AAF82475.1| light dependent NADH:protochlorophyllide oxidoreductase 2
           [Lycopersicon esculentum]
          Length = 281

 Score = 99.8 bits (247), Expect = 2e-20
 Identities = 44/66 (66%), Positives = 56/66 (84%)
 Frame = +2

Query: 2   KGYVSEEEAGRRLAAVISDPKLNKSGAYWSWSSTTGSFDNQVSEEVADDSKASKLWDISA 181
           KGYVSEEEAG+RLA V+ DP L+KSG YWSW+ST+ SF+NQ+S+E +D  KA KLW++S 
Sbjct: 216 KGYVSEEEAGKRLAQVVRDPSLSKSGVYWSWNSTSSSFENQLSKEASDAEKARKLWEVSE 275

Query: 182 KLVGLS 199
           KLVGL+
Sbjct: 276 KLVGLA 281

>gb|AAL58280.1|AC068923_22 putative dehydrogenase [Oryza sativa (japonica cultivar-group)]
           gi|31432862|gb|AAP54438.1| putative dehydrogenase [Oryza
           sativa (japonica cultivar-group)]
          Length = 402

 Score = 99.0 bits (245), Expect = 3e-20
 Identities = 43/66 (65%), Positives = 55/66 (83%)
 Frame = +2

Query: 2   KGYVSEEEAGRRLAAVISDPKLNKSGAYWSWSSTTGSFDNQVSEEVADDSKASKLWDISA 181
           KGYVSEEEAG+RLA V+SDP L KSG YWSW++ + SF+NQ+SEE +D  KA K+W++S 
Sbjct: 333 KGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNNNSASFENQLSEEASDPEKAKKVWELSE 392

Query: 182 KLVGLS 199
           KLVGL+
Sbjct: 393 KLVGLA 398



EST assemble image


clone accession position
1 MX212f11_r BP089709 1 282
2 HC059a04_r AV636400 13 518
3 MX250d04_r BP092151 14 349




Chlamydomonas reinhardtii
Kazusa DNA Research Institute