KCC002048A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002048A_C01 KCC002048A_c01
gataacaatgcttctgtcctctcgatccaccgcctcggtccgtgccagcggtcgcgctgc
acctgcgcctcgccgcgtggTGCGTGTCCTGGCCCACGGTCATGGTCACGGAGGTGGCCA
TGGTCACGGCCATGGCTCGAGTGGCACGGCGGTGCTGACGGAGAAGGACAAGGGCTTTAT
TGCTGAGATGCGCAAGGTGGCAATGAAGCTGCATACGAAGGACCAGGCGCCTAAGGAGGG
CGAGAAGGAGGCCCCCAAGCAAGGCCCGTGGACGCCCACTCGCCCGGGTTACCTGCGCTT
CCTGGTTGAGTCGAAGGAGGTCTTTGATACTTTCGAGCGCCTTGTCAACTCCAGCGACGC
CTACAAGGCGCTGCGCAACACGGGTCTGGAGCGCGGGCCAGGCCTGGCTGCCGACATTGC
CTGGATGGAGCAGTCCTTCCAGCTGGCGCCCCCGGACATGAAGCCGGACGGCGCGGCCGC
CACCTACGTGGCCTTTCTGGAGAAGCTCGCCAAGACCGACCCGCCCGCCTTCATCTGCCA
CTACTACAACTTCTATTTCGCACACACCGCCGGCGGCCGCATGATCGGCAACAAGGTGTC
CAGCATGCTGCTGGACGGCCAGACCCTGGAGTTCTACAAGTGGCAGGGCGACGTAAACGA
GCACCTGGAGGGCGTGCGCAAGTCCATCAACGTGATGGCCGAGGGCTGGACCCCGGCGGA
GAAGGAGCACTGCCTGGCGGAGACGAGTCCAGCTCAAGTACAGCGGCCAGATCTGCGCGC
TATCA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002048A_C01 KCC002048A_c01
         (785 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_177130.1| heme oxygenase -related [Arabidopsis thaliana] ...   210  2e-53
gb|AAK63014.1|AF320030_1 heme oxygenase 1 [Pinus taeda]               208  7e-53
gb|AAK63012.1|AF320028_1 heme oxygenase 1 [Lycopersicon esculentum]   208  9e-53
gb|AAK82969.1|AF276228_1 putative heme oxygenase 1 precursor [Pi...   203  3e-51
emb|CAD34591.1| heme oxygenase [Ceratodon purpureus]                  202  4e-51

>ref|NP_177130.1| heme oxygenase -related [Arabidopsis thaliana]
           gi|25370568|pir||B96719 probable heme oxygenase T6C23.8
           [imported] - Arabidopsis thaliana
           gi|12325201|gb|AAG52552.1|AC013289_19 putative heme
           oxygenase; 43724-42483 [Arabidopsis thaliana]
           gi|14485563|gb|AAK63006.1|AF320022_1 heme oxygenase 3
           [Arabidopsis thaliana] gi|21536512|gb|AAM60844.1|
           putative heme oxygenase [Arabidopsis thaliana]
          Length = 285

 Score =  210 bits (535), Expect = 2e-53
 Identities = 123/265 (46%), Positives = 160/265 (59%), Gaps = 21/265 (7%)
 Frame = +2

Query: 14  LSSRSTASVRASGRAA-----PAPRRVVRVLAHGHGHGGGHGHGHGSSGTAV-LTEKD-- 169
           LS  S   +R +GR +      APR  + V A+G         G  S  TA  +TEK   
Sbjct: 18  LSCESYLGLRTTGRISYARTLTAPRGYLAVKANG---------GQASVVTAAAITEKQQK 68

Query: 170 ------KGFIAEMRKVAMKLHTKDQAPKEGEKEA--PKQGP---WTPTRPGYLRFLVESK 316
                 KGF+ EMR VAM+LHTKDQA +EGEKE+  P++GP   W PT  GYL FLV+SK
Sbjct: 69  KYPGESKGFVEEMRFVAMRLHTKDQA-REGEKESRSPEEGPVAKWEPTVEGYLHFLVDSK 127

Query: 317 EVFDTFERLVNSSD--AYKALRNTGLERGPGLAADIAWMEQSFQLAPPDMKPDGAAATYV 490
            V+DT E +++ S+   Y   +NTGLER   L  D+ W ++     P  M P     TY 
Sbjct: 128 LVYDTLEGIIDGSNFPTYAGFKNTGLERAESLRKDLEWFKEQGYEIPEPMAP---GKTYS 184

Query: 491 AFLEKLAKTDPPAFICHYYNFYFAHTAGGRMIGNKVSSMLLDGQTLEFYKWQGDVNEHLE 670
            +L+ LA+ DP AFICH+YN YFAH+AGG+MIG KVS  +LD + LEFYKW G +++ L+
Sbjct: 185 EYLKDLAENDPQAFICHFYNIYFAHSAGGQMIGTKVSKKILDNKELEFYKWDGQLSQLLQ 244

Query: 671 GVRKSINVMAEGWTPAEKEHCLAET 745
            VR+ +N +AE WT  EK HCL ET
Sbjct: 245 NVRQKLNKVAEWWTREEKSHCLEET 269

>gb|AAK63014.1|AF320030_1 heme oxygenase 1 [Pinus taeda]
          Length = 316

 Score =  208 bits (530), Expect = 7e-53
 Identities = 113/230 (49%), Positives = 142/230 (61%), Gaps = 16/230 (6%)
 Frame = +2

Query: 104 GHGGGHGHGHGSSG----TAVLTEKD--------KGFIAEMRKVAMKLHTKDQAPKEGEK 247
           G    +G G+   G     A   EK         KGF+ EMR VAMKLHT+D A KEG+K
Sbjct: 75  GQSRSYGRGNSLGGLVVKAAATAEKPRKNYPGEAKGFVEEMRFVAMKLHTRDVA-KEGKK 133

Query: 248 EAPKQ--GPWTPTRPGYLRFLVESKEVFDTFERLVNSSD--AYKALRNTGLERGPGLAAD 415
           E   Q  G W PT  GYL+FLV+SK V+DT E +V  +   AY   RNTGLER   LA D
Sbjct: 134 EPDAQPIGKWEPTIEGYLKFLVDSKVVYDTLEDVVQKATYPAYAEFRNTGLERSEKLAKD 193

Query: 416 IAWMEQSFQLAPPDMKPDGAAATYVAFLEKLAKTDPPAFICHYYNFYFAHTAGGRMIGNK 595
           + W  Q   + P   +P     +Y   L++L++ DPPAF+CH+YN YFAHTAGGRMIG K
Sbjct: 194 LEWFRQQGHIIP---EPSSPGLSYSKHLQELSEKDPPAFLCHFYNVYFAHTAGGRMIGRK 250

Query: 596 VSSMLLDGQTLEFYKWQGDVNEHLEGVRKSINVMAEGWTPAEKEHCLAET 745
           V+  +LDG+ LEFYKW+ D+   L  VR+ IN++AEGW+  EK HCL ET
Sbjct: 251 VAEKILDGRELEFYKWEEDLTTLLNRVREKINLVAEGWSREEKNHCLEET 300

>gb|AAK63012.1|AF320028_1 heme oxygenase 1 [Lycopersicon esculentum]
          Length = 278

 Score =  208 bits (529), Expect = 9e-53
 Identities = 107/196 (54%), Positives = 132/196 (66%), Gaps = 4/196 (2%)
 Frame = +2

Query: 170 KGFIAEMRKVAMKLHTKDQAPKEGEKEAPKQ--GPWTPTRPGYLRFLVESKEVFDTFERL 343
           KGF+ EMR VAMKLHTKDQA KEGEKE   Q    W P+  GYL+FLV+SK V+DT ER+
Sbjct: 71  KGFVEEMRFVAMKLHTKDQA-KEGEKEPVDQPLAKWEPSVEGYLKFLVDSKLVYDTLERI 129

Query: 344 VNSSD--AYKALRNTGLERGPGLAADIAWMEQSFQLAPPDMKPDGAAATYVAFLEKLAKT 517
           V  +    Y   RNTGLER   LA D+ W  Q     P   +P     TY ++LE+L++ 
Sbjct: 130 VEKAPFPEYAEFRNTGLERSEVLAKDLEWFRQQGHAIP---EPSTPGVTYASYLEELSEK 186

Query: 518 DPPAFICHYYNFYFAHTAGGRMIGNKVSSMLLDGQTLEFYKWQGDVNEHLEGVRKSINVM 697
           DP AFICH+YN YFAH+AGGRMIG KV+  +LD + LEFYKW GD+++ L+ VR  +N +
Sbjct: 187 DPQAFICHFYNTYFAHSAGGRMIGKKVAEKVLDKKELEFYKWDGDLSQLLQNVRDKLNKV 246

Query: 698 AEGWTPAEKEHCLAET 745
           AE WT  EK HCL ET
Sbjct: 247 AENWTREEKNHCLEET 262

>gb|AAK82969.1|AF276228_1 putative heme oxygenase 1 precursor [Pisum sativum]
           gi|15076865|gb|AAK82970.1|AF276229_1 putative heme
           oxygenase 1 precursor [Pisum sativum]
           gi|15076867|gb|AAK82971.1|AF276230_1 putative heme
           oxygenase 1 precursor [Pisum sativum]
          Length = 283

 Score =  203 bits (516), Expect = 3e-51
 Identities = 103/199 (51%), Positives = 130/199 (64%), Gaps = 7/199 (3%)
 Frame = +2

Query: 170 KGFIAEMRKVAMKLHTKDQAPKEGEKEAPKQGP-----WTPTRPGYLRFLVESKEVFDTF 334
           KGF+ EMR VAM+LHTKDQA KEGEKE  K        W PT  GYLRFLV+SK V+DT 
Sbjct: 73  KGFVEEMRFVAMRLHTKDQA-KEGEKEVKKPEERAVTKWEPTVDGYLRFLVDSKIVYDTL 131

Query: 335 ERLVNSS--DAYKALRNTGLERGPGLAADIAWMEQSFQLAPPDMKPDGAAATYVAFLEKL 508
           E++V  +    Y   +NTGLER   L  D+ W ++     P   +P     TY  +L  L
Sbjct: 132 EKIVQDAAYPYYAEFKNTGLERSASLDKDLEWFKEQGYTIP---EPSSPGLTYAVYLTDL 188

Query: 509 AKTDPPAFICHYYNFYFAHTAGGRMIGNKVSSMLLDGQTLEFYKWQGDVNEHLEGVRKSI 688
           ++ DP AFICH+YN YFAH+AGGRMIG K++S LL+ Q LEFYKW GD+++ L+ VR  +
Sbjct: 189 SQNDPQAFICHFYNIYFAHSAGGRMIGKKIASQLLNNQALEFYKWDGDLSQMLQNVRDKL 248

Query: 689 NVMAEGWTPAEKEHCLAET 745
           N +AE W+  EK HCL ET
Sbjct: 249 NKVAEEWSREEKNHCLEET 267

>emb|CAD34591.1| heme oxygenase [Ceratodon purpureus]
          Length = 306

 Score =  202 bits (515), Expect = 4e-51
 Identities = 107/200 (53%), Positives = 140/200 (69%), Gaps = 8/200 (4%)
 Frame = +2

Query: 170 KGFIAEMRKVAMKLHTKDQAPKEGEKEAPKQ--GPWTPTRPGYLRFLVESKEVFDTFERL 343
           KGF+ EMR VAMKLHT+DQ+ KEGEKEA  Q  G W P+ PGY++FLV+SK+V+DT E +
Sbjct: 97  KGFVEEMRFVAMKLHTRDQS-KEGEKEADVQPVGQWKPSIPGYIKFLVDSKKVYDTMETI 155

Query: 344 VN-----SSDAYKALRNTGLERGPGLAADIAWM-EQSFQLAPPDMKPDGAAATYVAFLEK 505
           V      SSD Y   RNTGLER   LA D+ W   Q  ++  P+  PDG   TY   L +
Sbjct: 156 VEKASHPSSDEY--FRNTGLERSARLAKDLEWFASQGHEI--PEAGPDGI--TYANLLTE 209

Query: 506 LAKTDPPAFICHYYNFYFAHTAGGRMIGNKVSSMLLDGQTLEFYKWQGDVNEHLEGVRKS 685
           L+++D PAFICH+YN YFAH+AGGR IG +V+  +LDG+ LEFYKW G+++E L  V+ +
Sbjct: 210 LSESDVPAFICHFYNVYFAHSAGGRFIGKQVAQQILDGRELEFYKWDGELSELLGAVKVN 269

Query: 686 INVMAEGWTPAEKEHCLAET 745
           +N +AE WT  +K+HCL ET
Sbjct: 270 LNKVAEEWTREQKDHCLKET 289



EST assemble image


clone accession position
1 HC055h11_r AV636161 1 475
2 MX023a10_r BP087023 231 734
3 LC032c08_r AV621175 244 785




Chlamydomonas reinhardtii
Kazusa DNA Research Institute