KCC002047A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002047A_C01 KCC002047A_c01
cctactcgctgtttgaggacgacctggacgagtgggtgcccgagggctgccgcgacctgt
gcgcgcagctgctggcccccTCGCCCTCCGACCGCCCCAGCGCCAAAGAGGCGCTTGCGC
ACTGGTGGCTGAACGAGTAGAAGACGACGGATGCCTTGCAGCTTGGGCCGCTTGCAAGAT
CGAGGGACGTAGGCACGTGGACGTAGGGGTGGAGGACTTGATGCACGTTCAGGATTGGAT
GCTGTTTCGCAAGGCATTTCAATCCGACGCATGGTTTATAACCTTAGCTGTAGTTGCATT
TACGGTACCGTATGCTGGTGTGGGTACAGGTGGTGAACGCGGGCACTGAACAAATGAACG
AACTGAGGTGATGGGCAATGGCCGATGGGCTGTGAGAGGGCGTTGCGCCAGCACTGCTTT
CGAACATGCACAGCCCACGTAGGCTGCGATGCGGTGTACGACTCTAATGTAGGGCGGTAA
GAAGGCTGCTTCGTGAGTGCAACTGCGGTGATGAGCTGCATACTGGGCTGCATGTGTCAG
GGTGCGTGGAGACAGAGTGACACGGAAATGGCGAGATGGCGTTCGGTACTCCCCTTGACC
TTGGACAGTATACGGGGTTGTACATGAATCATACCTTGCGGAGCGGCGAGCGTAACTTGA
GAGTTAGTGCAGTCTATTGATATTGACGTGCTTAAAAAAACGCAACACT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002047A_C01 KCC002047A_c01
         (709 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_012284.1| Required for invasion and pseudohyphae formatio...    36  0.011
ref|XP_318620.1| ENSANGP00000020885 [Anopheles gambiae] gi|21302...    42  0.012
pir||S46283 calcium-dependent protein kinase (EC 2.7.1.-) 1 - Ar...    41  0.021
ref|NP_564066.1| calcium-dependent protein kinase (CDPK1) [Arabi...    41  0.021
pir||H86322 calcium-dependent protein kinase 1 [imported] - Arab...    41  0.021

>ref|NP_012284.1| Required for invasion and pseudohyphae formation in response to
           nitrogen starvation; Muc1p [Saccharomyces cerevisiae]
           gi|728850|sp|P08640|AMYH_YEAST Glucoamylase S1/S2
           precursor (Glucan 1,4-alpha-glucosidase)
           (1,4-alpha-D-glucan glucohydrolase)
           gi|626156|pir||S48478 glucan 1,4-alpha-glucosidase (EC
           3.2.1.3) - yeast  (Saccharomyces cerevisiae)
           gi|557822|emb|CAA86176.1| mal5 [Saccharomyces
           cerevisiae] gi|1304387|gb|AAC49609.1| glucoamylase
           [Saccharomyces cerevisiae var. diastaticus]
          Length = 1367

 Score = 35.8 bits (81), Expect(2) = 0.011
 Identities = 25/89 (28%), Positives = 42/89 (47%)
 Frame = -2

Query: 375 PITSVRSFVQCPRSPPVPTPAYGTVNATTAKVINHASD*NALRNSIQS*TCIKSSTPTST 196
           P+ +  S      S PVPTP+  T  +++A V +  ++ ++    + S T   SS P  T
Sbjct: 652 PVPTPSSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSA--PVTSSTTESSSAPVPT 709

Query: 195 CLRPSILQAAQAARHPSSSTRSATSAQAP 109
               +   ++     PSSST  ++SA  P
Sbjct: 710 PSSSTTESSSAPVPTPSSSTTESSSAPVP 738

 Score = 35.0 bits (79), Expect(2) = 0.014
 Identities = 27/86 (31%), Positives = 38/86 (43%)
 Frame = -2

Query: 375  PITSVRSFVQCPRSPPVPTPAYGTVNATTAKVINHASD*NALRNSIQS*TCIKSSTPTST 196
            P+ +  S      S PVPTP+  T  ++ A V   +S  N           I SS P+ST
Sbjct: 778  PVPTPSSSTTESSSAPVPTPSSSTTESSVAPVPTPSSSSN-----------ITSSAPSST 826

Query: 195  CLRPSILQAAQAARHPSSSTRSATSA 118
                S   ++     PSSST  ++SA
Sbjct: 827  PFSSSTESSSVPVPTPSSSTTESSSA 852

 Score = 33.9 bits (76), Expect = 2.5
 Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
 Frame = -2

Query: 375 PITSVRSFVQCPRSPPVPTPAYGTVNATTAKVINHASD-*NALRNSIQS*TCIKSSTPTS 199
           P+ +  S      S P PTP+  T  +++A V +  ++  +A   +  S T   SSTP +
Sbjct: 511 PVPTPSSSTTESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSTPVT 570

Query: 198 TCLRPSILQAAQAARHPSSSTRSATSAQAPLWRWGGRRARGPAAARTGRGSPRAPT 31
           +    S   ++     PSSST  ++SA  P           P+++ T   S  APT
Sbjct: 571 SSTTES---SSAPVPTPSSSTTESSSAPVPT----------PSSSTTESSSAPAPT 613

 Score = 32.0 bits (71), Expect(2) = 0.13
 Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
 Frame = -2

Query: 336 SPPVPTPAYGTVNATTAKVINHASD-*NALRNSIQS*TCIKSSTPTSTCLRPSILQAAQA 160
           S PVPTP+  T  +++A V +  ++  +A   +  S T   SS P ++    S   ++  
Sbjct: 455 SAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTES---SSAP 511

Query: 159 ARHPSSSTRSATSAQAP 109
              PSSST  ++SA AP
Sbjct: 512 VPTPSSSTTESSSAPAP 528

 Score = 30.8 bits (68), Expect(2) = 3.5
 Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 1/105 (0%)
 Frame = -2

Query: 420 KAVLAQRPLTAHRPLPITSVRSFVQCPRSPPVPTPAYGTVNATTAKVINHASD*NALRNS 241
           K     +  T     P+ +  S      S PVPTP+  T  +++A V +  ++      S
Sbjct: 298 KKTTTSKTCTKKTTTPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVTSSTTE------S 351

Query: 240 IQS*TCIKSSTPTSTCLRPSILQAAQAARHP-SSSTRSATSAQAP 109
             +     SS+ T +   P      +++  P +SST  ++SA  P
Sbjct: 352 SSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVP 396

 Score = 25.4 bits (54), Expect(2) = 0.014
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -1

Query: 616 PVYCPRSRGVPNAISPFPCHSVSTHPDTCSPVCSSSPQLHS 494
           PV  P S    ++ +P P  S ST   + +PV SS+ +  S
Sbjct: 721 PVPTPSSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSS 761

 Score = 25.0 bits (53), Expect(2) = 0.011
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -1

Query: 616 PVYCPRSRGVPNAISPFPCHSVSTHPDTCSPVCSSSPQLHS 494
           PV  P S    ++ +P P  S ST   + +PV SS+ +  S
Sbjct: 595 PVPTPSSSTTESSSAPAPTPSSSTTESSSAPVTSSTTESSS 635

 Score = 25.0 bits (53), Expect(2) = 0.13
 Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 2/89 (2%)
 Frame = -1

Query: 574 SPFPCHSVSTHPDTCSPVCSSSPQLHSRSSLLTALH*SRTPHRSLRGLCMFESSAGATPS 395
           +P P  S ST   + +PV SS+ +  S     +    S  P  +        SSA  T S
Sbjct: 354 APVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSS 413

Query: 394 HSPSAIAHHLSSFI--CSVPAFTTCTHTS 314
            + S+ A   SS     S P  ++ T +S
Sbjct: 414 TTESSSAPVTSSTTESSSAPVTSSTTESS 442

 Score = 21.2 bits (43), Expect(2) = 3.5
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = -3

Query: 509 TAVALTKQPSYRPTLESYTASQPTWAVHVRKQC 411
           T  + TK+    PT  S T  +PT   H    C
Sbjct: 263 TTTSCTKEKPTPPTTTSCTKEKPTPPHHDTTPC 295

>ref|XP_318620.1| ENSANGP00000020885 [Anopheles gambiae] gi|21302266|gb|EAA14411.1|
           ENSANGP00000020885 [Anopheles gambiae str. PEST]
          Length = 388

 Score = 41.6 bits (96), Expect = 0.012
 Identities = 39/138 (28%), Positives = 57/138 (41%), Gaps = 19/138 (13%)
 Frame = -2

Query: 366 SVRSFVQCPRSPPVPTPAYGTVNATTAKVINHASD*NALRNSIQS*TCIKS-STPTSTCL 190
           + R+    P SP  P     T  +TTA  +N  S  ++  ++  S T   S +TPTS  +
Sbjct: 94  TTRTSPSAPTSPSTPQTTISTTESTTAVTMNSDSSSSSTESTTPSSTTSTSMTTPTSPTI 153

Query: 189 --------RPSILQAAQAARHPS----------SSTRSATSAQAPLWRWGGRRARGPAAA 64
                    P+I  +  A   PS          S+T S+T++ +P           P   
Sbjct: 154 PTSPTSPSSPTIRTSPSATTSPSTPKTSSSTTESTTASSTTSISPTIPSSPTSLSSP--- 210

Query: 63  RTGRGSPRAPTRPGRPQT 10
            T R SP APT P  P+T
Sbjct: 211 -TTRTSPSAPTSPSTPET 227

>pir||S46283 calcium-dependent protein kinase (EC 2.7.1.-) 1 - Arabidopsis
           thaliana gi|604880|dbj|BAA04829.1| calcium-dependent
           protein kinase [Arabidopsis thaliana]
          Length = 493

 Score = 40.8 bits (94), Expect = 0.021
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = +3

Query: 27  DEW--VPEGCRDLCAQLLAPSPSDRPSAKEALAHWWLNE*KTTDALQLGPLARSR 185
           D W  + E  + L  Q+L P P+ R +A++ LAH W+   K    + LG + RSR
Sbjct: 233 DPWPQISESAKSLVKQMLDPDPTKRLTAQQVLAHPWIQNAKKAPNVPLGDIVRSR 287

>ref|NP_564066.1| calcium-dependent protein kinase (CDPK1) [Arabidopsis thaliana]
          Length = 493

 Score = 40.8 bits (94), Expect = 0.021
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = +3

Query: 27  DEW--VPEGCRDLCAQLLAPSPSDRPSAKEALAHWWLNE*KTTDALQLGPLARSR 185
           D W  + E  + L  Q+L P P+ R +A++ LAH W+   K    + LG + RSR
Sbjct: 233 DPWPQISESAKSLVKQMLDPDPTKRLTAQQVLAHPWIQNAKKAPNVPLGDIVRSR 287

>pir||H86322 calcium-dependent protein kinase 1 [imported] - Arabidopsis
           thaliana gi|6730697|gb|AAF27092.1|AC011809_1
           calcium-dependent protein kinase 1 [Arabidopsis
           thaliana]
          Length = 545

 Score = 40.8 bits (94), Expect = 0.021
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = +3

Query: 27  DEW--VPEGCRDLCAQLLAPSPSDRPSAKEALAHWWLNE*KTTDALQLGPLARSR 185
           D W  + E  + L  Q+L P P+ R +A++ LAH W+   K    + LG + RSR
Sbjct: 285 DPWPQISESAKSLVKQMLDPDPTKRLTAQQVLAHPWIQNAKKAPNVPLGDIVRSR 339



EST assemble image


clone accession position
1 HC055h05_r AV636155 1 440
2 LC003f08_r AV619091 173 709
3 LCL063b09_r AV629666 491 777




Chlamydomonas reinhardtii
Kazusa DNA Research Institute