KCC002032A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002032A_C01 KCC002032A_c01
gaatgttgccttttccacagcatggatgGTCGCTTGGGTGGTCGCGTCAGCCCACGAACT
CGCGAAGAATCACTGCGAAGTCGACAAGCCTTCCTGAGCCCGTGAACACCACGAGCGTGT
CTCAGCCAGAGCCCAGAAGCGTCTCGCAGCCAGTGAAATCTGGCACCATCACGAGCTTCA
TAGAGAAGAACCAAGGCATTCTTGCAGTTGGGGCAATCGCAACGTCTTGTTACGGTGCCG
GCTTTGCGGCCCACAGCATCCTTTCAGAATTGCAAATTTCCCAGGTCACTGCAAACGCCA
AAACTGACGTCCTGGCAGCGGAGCAGCGCGCCAAAATTGACGTCCTGGCAGCGGAGCAGC
GCGCCCAGGCAGCGGAGCAGCGCGCCCAGACAGCGGACCTGCG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002032A_C01 KCC002032A_c01
         (403 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAA25462.1| KIAA0536 protein [Homo sapiens]                        38  0.030
dbj|BAC37340.1| unnamed protein product [Mus musculus]                 38  0.030
ref|XP_214469.2| similar to PRP4 kinase [Rattus norvegicus]            38  0.030
gb|AAC32042.1| PRP4 protein kinase homolog [Mus musculus]              38  0.030
emb|CAB94780.1| dJ1013A10.1 (PRP4 protein kinase homolog) [Homo ...    38  0.030

>dbj|BAA25462.1| KIAA0536 protein [Homo sapiens]
          Length = 1028

 Score = 38.1 bits (87), Expect = 0.030
 Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
 Frame = +1

Query: 46  VSPRTREESLRSRQAFLSP*TPRACLSQSPEASRSQ*NLAPSRAS*RRTKAFLQLGQSQR 225
           +SP+ R++S RSR   L+    R+  S+SP  + S    A SR+  R+ +        +R
Sbjct: 376 LSPKPRDKSRRSRSPLLND--RRSKQSKSPSRTLSPGRRAKSRSLERKRRE-----PERR 428

Query: 226 LVTVPALRPTASFQNCKFPRSLQTPKLTSW----QRSSAP----KLTSWQRSSAPRQRSS 381
            ++ P  RP     + +  RS     +  W    +RS +P      +  +RS +PR+RS 
Sbjct: 429 RLSSPRTRPRDDILSRR-ERSKDASPINRWSPTRRRSRSPIRRRSRSPLRRSRSPRRRSR 487

Query: 382 APRQR 396
           +PR+R
Sbjct: 488 SPRRR 492

>dbj|BAC37340.1| unnamed protein product [Mus musculus]
          Length = 497

 Score = 38.1 bits (87), Expect = 0.030
 Identities = 36/125 (28%), Positives = 60/125 (47%), Gaps = 8/125 (6%)
 Frame = +1

Query: 46  VSPRTREESLRSRQAFLSP*TPRACLSQSPEASRSQ*NLAPSRAS*RRTKAFLQLGQSQR 225
           +SP+ R++S RSR   L+    R+  S+SP  + S    A SR+  R+ +        +R
Sbjct: 355 LSPKLRDKSRRSRSPLLND--RRSKQSKSPSRTLSPGRRAKSRSLERKRRE-----PERR 407

Query: 226 LVTVPALRPTASFQNCKFPRSLQTPKLTSW----QRSSAP----KLTSWQRSSAPRQRSS 381
            ++ P  RP       +  RS     +  W    +RS +P      +  +RS +PR+RS 
Sbjct: 408 RLSSPRTRPRDDILG-RCERSKDASPINRWSPTRRRSRSPIRRRSRSPLRRSRSPRRRSR 466

Query: 382 APRQR 396
           +PR+R
Sbjct: 467 SPRRR 471

>ref|XP_214469.2| similar to PRP4 kinase [Rattus norvegicus]
          Length = 1252

 Score = 38.1 bits (87), Expect = 0.030
 Identities = 36/125 (28%), Positives = 60/125 (47%), Gaps = 8/125 (6%)
 Frame = +1

Query: 46  VSPRTREESLRSRQAFLSP*TPRACLSQSPEASRSQ*NLAPSRAS*RRTKAFLQLGQSQR 225
           +SP+ R++S RSR   L+    R+  S+SP  + S    A SR+  R+ +        +R
Sbjct: 621 LSPKQRDKSRRSRSPLLND--RRSKQSKSPSRTLSPGRRAKSRSLERKRRE-----PERR 673

Query: 226 LVTVPALRPTASFQNCKFPRSLQTPKLTSW----QRSSAP----KLTSWQRSSAPRQRSS 381
            ++ P  RP       +  RS     +  W    +RS +P      +  +RS +PR+RS 
Sbjct: 674 RLSSPRTRPRDDILG-RCERSKDASPINRWSPSRRRSRSPIRRRSRSPLRRSRSPRRRSR 732

Query: 382 APRQR 396
           +PR+R
Sbjct: 733 SPRRR 737

>gb|AAC32042.1| PRP4 protein kinase homolog [Mus musculus]
          Length = 823

 Score = 38.1 bits (87), Expect = 0.030
 Identities = 36/125 (28%), Positives = 60/125 (47%), Gaps = 8/125 (6%)
 Frame = +1

Query: 46  VSPRTREESLRSRQAFLSP*TPRACLSQSPEASRSQ*NLAPSRAS*RRTKAFLQLGQSQR 225
           +SP+ R++S RSR   L+    R+  S+SP  + S    A SR+  R+ +        +R
Sbjct: 171 LSPKLRDKSRRSRSPLLND--RRSKQSKSPSRTLSPGRRAKSRSLERKRRE-----PERR 223

Query: 226 LVTVPALRPTASFQNCKFPRSLQTPKLTSW----QRSSAP----KLTSWQRSSAPRQRSS 381
            ++ P  RP       +  RS     +  W    +RS +P      +  +RS +PR+RS 
Sbjct: 224 RLSSPRTRPRDDILG-RCERSKDASPINRWSPTRRRSRSPIRRRSRSPLRRSRSPRRRSR 282

Query: 382 APRQR 396
           +PR+R
Sbjct: 283 SPRRR 287

>emb|CAB94780.1| dJ1013A10.1 (PRP4 protein kinase homolog) [Homo sapiens]
          Length = 991

 Score = 38.1 bits (87), Expect = 0.030
 Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
 Frame = +1

Query: 46  VSPRTREESLRSRQAFLSP*TPRACLSQSPEASRSQ*NLAPSRAS*RRTKAFLQLGQSQR 225
           +SP+ R++S RSR   L+    R+  S+SP  + S    A SR+  R+ +        +R
Sbjct: 341 LSPKPRDKSRRSRSPLLND--RRSKQSKSPSRTLSPGRRAKSRSLERKRRE-----PERR 393

Query: 226 LVTVPALRPTASFQNCKFPRSLQTPKLTSW----QRSSAP----KLTSWQRSSAPRQRSS 381
            ++ P  RP     + +  RS     +  W    +RS +P      +  +RS +PR+RS 
Sbjct: 394 RLSSPRTRPRDDILSRR-ERSKDASPINRWSPTRRRSRSPIRRRSRSPLRRSRSPRRRSR 452

Query: 382 APRQR 396
           +PR+R
Sbjct: 453 SPRRR 457



EST assemble image


clone accession position
1 HC052c11_r AV635892 1 403
2 MX203e12_r BP089242 29 375




Chlamydomonas reinhardtii
Kazusa DNA Research Institute