KCC002024A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002024A_C01 KCC002024A_c01
caacgacgctgtcggtctggacctgctacgccgcatgctctgctacgacccgcggcagcg
catcaccgccagcgaggcgcTGGTGCACCCATGGTTCAACGACGTCGTCGTGTGAGCGTG
CTGCTTGCTCGCCTGCAGCAGCGCTTGCAGCAGCGTGGCTAGCTGCACTGAGTGGATTGA
GCATTTCTTGGTGCCGCGCGTGCTTGTTGGCTCACCGCGCCTGGAGTGCAGATGACATAA
CCTTCGATGTCAGGGCACGCACGTGTCCTGCTCATACCAGATTTTGTTTCGGTACTGTGT
TCCTTGATATAATGCAAGCAACGACAGTGCATATCTTTACTTGACTTTGCCAAGTGTATA
TGCATGTTTGGTGTGGTATGGTAAGCATGGTCACCTGGCGCCACACTTGGATATCACTAA
CGATCACCGCCTTGCATCTATGTGCACCTTGATTGGTACCGTTAGATGGCAGAGCGCGCT
GAGATAACCATTTGTTCCGCCGGTGCGCTCACAAGGGTGATAAGGGCTCTGACTCGGCAA
TGACTTTCAGTTGTTCCACCATCCCAGGCATTGCTAGGGTGATTTCGATGCACCCTGGCG
GGTCCGCCCACACATTGGTTGACGTCTTGGACGTTTGCTCTTCGTGGCAAACCCCTTTCC
TTTTTTGCGCCACAATTGGTTTTAAGTGTACCCCGCGTGCCGTGCACCGTTCTGGGACTC
GTTTTAGGCAATGAGAGGGCAGCTAGCAGAGAAGGTAAGGCAGGGTAGTGACTGCGCGCC
TTGGGCGCTTACGCCATTGCGGTCTGGTTCCCCGGATACCTTGGTGGCATGTAGCTTGCT
AGTCAGATTTGAGGCATTTTTTTGGTGTAGCTTTATATAGGACGGGTGTGCACGGCAACA
AGCATAGTTTGTGCATTTTCTCGTGAATGGCCGTGCATGCGATGCAAGCTGGAGAGGCGC
CGCGCACGCATTCCGCGGGCTAGCTCCGCTGAGACGGGTGGACAAGAATGGGTCAATTAT
TACAGGGTTCGCCTTGGGTATGGTTCTATGTGTTGCAAGCGTTTGTTTGGTCGTGATCGG
CTGCTGTGGTTGCCGTTGTGAGCTACGGTCTGCTCCTGTTTAGGTTACAACGCGGAGAGT
TTGGCGTTTCAACCGGTATGTGACTGCTGTGTTCTTGTACGGAGGTATGCGCGGCCCAGA
TACGGTATATTCTGAGGTAGCTGCGGGACATTTGCCTGGTGCTTGGCATGATATACAGCG
GCGAAGTTTGTGTTCGGTATGTCTGAACGTGTGGATATTCGTGTTCTACGGCTGAATCCC
CACATCATTC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002024A_C01 KCC002024A_c01
         (1330 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|P54665|CC22_TRYBB CELL DIVISION CONTROL PROTEIN 2 HOMOLOG 2 g...    51  4e-05
ref|NP_703815.1| cdc2-like protein kinase, putative [Plasmodium ...    50  1e-04
gb|EAA18765.1| cdc2-related protein kinase 2-related [Plasmodium...    50  1e-04
sp|P43063|CC28_CANAL CELL DIVISION CONTROL PROTEIN 28 gi|2117789...    49  2e-04
emb|CAA04648.2| cdc2-related kinase 3 [Leishmania mexicana]            49  2e-04

>sp|P54665|CC22_TRYBB CELL DIVISION CONTROL PROTEIN 2 HOMOLOG 2 gi|480269|pir||S36607
           protein kinase (EC 2.7.1.37) crk2 [similarity] -
           Trypanosoma brucei gi|397162|emb|CAA52676.1|
           CDC2-related protein kinase [Trypanosoma brucei]
          Length = 345

 Score = 51.2 bits (121), Expect = 4e-05
 Identities = 23/34 (67%), Positives = 29/34 (84%)
 Frame = +2

Query: 5   DAVGLDLLRRMLCYDPRQRITASEALVHPWFNDV 106
           D  G+DLLRRMLCY+PR+RITA EAL H +F++V
Sbjct: 298 DDDGVDLLRRMLCYNPRERITAYEALQHSYFDEV 331

>ref|NP_703815.1| cdc2-like protein kinase, putative [Plasmodium falciparum 3D7]
           gi|23498476|emb|CAD50427.1| cdc2-like protein kinase,
           putative [Plasmodium falciparum 3D7]
          Length = 705

 Score = 49.7 bits (117), Expect = 1e-04
 Identities = 20/34 (58%), Positives = 28/34 (81%)
 Frame = +2

Query: 5   DAVGLDLLRRMLCYDPRQRITASEALVHPWFNDV 106
           D +G+DLL +ML Y+P  RITA++AL HPWF+D+
Sbjct: 469 DELGIDLLVKMLKYNPNDRITAADALSHPWFSDI 502

>gb|EAA18765.1| cdc2-related protein kinase 2-related [Plasmodium yoelii yoelii]
          Length = 633

 Score = 49.7 bits (117), Expect = 1e-04
 Identities = 20/34 (58%), Positives = 28/34 (81%)
 Frame = +2

Query: 5   DAVGLDLLRRMLCYDPRQRITASEALVHPWFNDV 106
           D +G+DLL +ML Y+P  RITA++AL HPWF+D+
Sbjct: 478 DELGIDLLVKMLKYNPNDRITAADALSHPWFSDI 511

>sp|P43063|CC28_CANAL CELL DIVISION CONTROL PROTEIN 28 gi|2117789|pir||JC4827 protein
           kinase (EC 2.7.1.37) cdc28 - yeast (Candida albicans)
           gi|520628|emb|CAA56338.1| Cdc 28 protein kinase [Candida
           albicans] gi|1103926|gb|AAC49450.1| Cdk1
          Length = 317

 Score = 49.3 bits (116), Expect = 2e-04
 Identities = 21/33 (63%), Positives = 27/33 (81%)
 Frame = +2

Query: 5   DAVGLDLLRRMLCYDPRQRITASEALVHPWFND 103
           DA G+DLL +ML YDP +RI+A  AL+HP+FND
Sbjct: 262 DANGIDLLDQMLVYDPSRRISAKRALIHPYFND 294

>emb|CAA04648.2| cdc2-related kinase 3 [Leishmania mexicana]
          Length = 311

 Score = 48.9 bits (115), Expect = 2e-04
 Identities = 20/30 (66%), Positives = 26/30 (86%)
 Frame = +2

Query: 17  LDLLRRMLCYDPRQRITASEALVHPWFNDV 106
           +DLL +ML YDPR+RI+A EAL HPWF+D+
Sbjct: 280 IDLLSKMLKYDPRERISAKEALQHPWFSDL 309



EST assemble image


clone accession position
1 MX040d12_r BP087656 1 355
2 LCL091a12_r AV631263 151 456
3 HC050c09_r AV635739 154 678
4 HC078f10_r AV637870 199 644
5 LC060a01_r AV623175 300 819
6 MXL045e09_r BP095670 667 1053
7 LC076d01_r AV624336 768 1330




Chlamydomonas reinhardtii
Kazusa DNA Research Institute