Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001998A_C01 KCC001998A_c01
(649 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P20186|YT35_STRFR Hypothetical 35.5 kDa protein in transposon... 42 0.008
gb|AAC60064.1| winged helix protein CWH-1 [Gallus gallus] 42 0.008
gb|AAQ67337.1| iron receptor-like protein [Stenotrophomonas malt... 42 0.010
dbj|BAC55639.1| OJ1081_B12.22 [Oryza sativa (japonica cultivar-g... 40 0.023
ref|NP_044495.1| protease [Human herpesvirus 2] gi|1869848|emb|C... 37 0.19
>sp|P20186|YT35_STRFR Hypothetical 35.5 kDa protein in transposon Tn4556
gi|80759|pir||JQ0431 hypothetical 35.5K protein -
Streptomyces fradiae transposon Tn4556
gi|1196912|gb|AAA88561.1| unknown protein [Streptomyces
fradiae]
Length = 348
Score = 42.0 bits (97), Expect = 0.008
Identities = 44/144 (30%), Positives = 62/144 (42%), Gaps = 4/144 (2%)
Frame = -3
Query: 551 QPRLSAYTSA--VAERPSCTTS*RRRKLLCIKSCRGIPSTAPTGAAPGSRAAALRNPGRS 378
QP+ A +A A R C T+ LL +++P AAP + +A R P R+
Sbjct: 206 QPKSPAPLAARCSASRAGCPTA--AGSLLPAPRPPASSASSPQAAAPAAPSAT-RLPRRT 262
Query: 377 SYLFDQLLTASAPRRPPRNASAAPFR--PGSPRPYSL*TSQQGTCEQHLEVATRRSPRCA 204
+ + +S P RPP A+ P R PG+PRP + C + + R
Sbjct: 263 TPSAPR--PSSRPARPPIPAARPPPRRTPGTPRPAAARARAPAGCSPARRTPSAPTDRRC 320
Query: 203 *AGSHGAARRRAARPPRIQGKTFD 132
A G+ R AARPP QG D
Sbjct: 321 RAARRGSPRPPAARPPGRQGTRRD 344
>gb|AAC60064.1| winged helix protein CWH-1 [Gallus gallus]
Length = 443
Score = 42.0 bits (97), Expect = 0.008
Identities = 36/106 (33%), Positives = 47/106 (43%), Gaps = 1/106 (0%)
Frame = -3
Query: 434 PTGAAPGSRAAALRNPGRSSYLFDQLLTASAPRRPPRNASAAPFRPGSPRPYSL*TSQQG 255
PT A G AAA NP R S+ D ++ + P P N SAA P +P P + Q G
Sbjct: 345 PTPAGTGGTAAATTNPSRPSFSIDNIIGGAVPPPPSTNPSAA---PAAPYP----SGQAG 397
Query: 254 TCEQHLEVATRRSPRCA*AGSHGAARRRAARPPRIQ-GKTFDPKLS 120
Q L V SP A + HG A P +Q + F K++
Sbjct: 398 PPAQLLAVL---SPALAPSQPHGG----LAHEPLLQPAQNFSAKIT 436
>gb|AAQ67337.1| iron receptor-like protein [Stenotrophomonas maltophilia]
Length = 125
Score = 41.6 bits (96), Expect = 0.010
Identities = 32/101 (31%), Positives = 37/101 (35%), Gaps = 4/101 (3%)
Frame = +3
Query: 153 ARWTCRAPSCRAV---ASSLSAP-WRPACRDLQVLFASTLLRSSQ*IRTWRARPKWRG*R 320
A TCR +C A +SS + P W CR + ST R WR R W R
Sbjct: 30 AATTCRGVTCSASRRWSSSAACPAWSMVCRASRPSVRSTAAR-------WRCRSAWPM-R 81
Query: 321 VPWRTSRSRCCQKLIK*IRRSTGISESCGSTSWCCSCWCCR 443
W C + SC TSWCC C C R
Sbjct: 82 TCWHPGGRTCRHRW-----------RSCWPTSWCCWCCCMR 111
>dbj|BAC55639.1| OJ1081_B12.22 [Oryza sativa (japonica cultivar-group)]
Length = 1273
Score = 40.4 bits (93), Expect = 0.023
Identities = 49/152 (32%), Positives = 63/152 (41%)
Frame = -3
Query: 611 TPALRQNHQAAQAAKAS**RQPRLSAYTSAVAERPSCTTS*RRRKLLCIKSCRGIPSTAP 432
TP R +H+ K+ R R+S S+ A RP R+ L + CR I
Sbjct: 1034 TPYSRSDHKEGTIGKSPR-RCRRISP--SSRARRP--------RRRLHLLRCRRIS---- 1078
Query: 431 TGAAPGSRAAALRNPGRSSYLFDQLLTASAPRRPPRNASAAPFRPGSPRPYSL*TSQQGT 252
G RAAA R+P L D L S RRPPR+A+ P R + P S +
Sbjct: 1079 -----GVRAAAARSPFMHLDLSD--LDLSPSRRPPRDAT--PRRRRATPPPSPLRNAAAA 1129
Query: 251 CEQHLEVATRRSPRCA*AGSHGAARRRAARPP 156
C++H AT R A A A A PP
Sbjct: 1130 CQRHAAAATPRHAAAATAPQRHATTAVATPPP 1161
>ref|NP_044495.1| protease [Human herpesvirus 2] gi|1869848|emb|CAB06750.1| protease
[Human herpesvirus 2]
Length = 637
Score = 37.4 bits (85), Expect = 0.19
Identities = 28/82 (34%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Frame = -3
Query: 530 TSAVAERPSCTTS*RRRKLLCIKSCRGIPSTAPTGAAPGSRAAALRNPGRSSYL------ 369
TS A P+ + R R++ S P+ A S A A PG SYL
Sbjct: 276 TSPAASVPAPQVAVRARQVASSSSSSSFPAPADMNPVSASGAPAPPPPGDGSYLWIPASH 335
Query: 368 FDQLLTA-SAPRRPPRNASAAP 306
++QL+T SAPR PP A P
Sbjct: 336 YNQLVTGQSAPRHPPLTACGLP 357
