Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001996A_C01 KCC001996A_c01
(539 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAP44649.1| putative ABC transporter, 5'-partial [Oryza sativ... 227 7e-59
ref|NP_564850.1| ABC transporter family protein [Arabidopsis tha... 212 3e-54
ref|NP_484224.1| ATP-binding protein of ABC transporter [Nostoc ... 195 4e-49
pir||T02364 hypothetical protein T8F5.19 - Arabidopsis thaliana ... 193 1e-48
ref|NP_440370.1| ABC transporter [Synechocystis sp. PCC 6803] gi... 189 2e-47
>gb|AAP44649.1| putative ABC transporter, 5'-partial [Oryza sativa (japonica
cultivar-group)]
Length = 281
Score = 227 bits (579), Expect = 7e-59
Identities = 113/173 (65%), Positives = 143/173 (82%), Gaps = 2/173 (1%)
Frame = +1
Query: 1 LTVGENVGFLLYEHSTLPEKKIRELVADSLGKVGLRGVEDLYPAELSGGMKKRVALARAV 180
LTV ENVGFLLYE+S+LPE++I LV ++L VGL+GVED P+ELSGGMKKRVALAR++
Sbjct: 110 LTVRENVGFLLYENSSLPEERIATLVTETLAAVGLKGVEDRMPSELSGGMKKRVALARSI 169
Query: 181 V-SDVRTDVE-QVIMYDEPTAGLDPVASTVVEDLMRSLHAQATETMLDGKPSGISSYIVV 354
+ D + +E +VI+YDEPTAGLDP+ASTVVEDL+RS+H + + GKP I+SY+VV
Sbjct: 170 IYDDTKETIEPEVILYDEPTAGLDPIASTVVEDLIRSVHVTGKDAL--GKPGKIASYVVV 227
Query: 355 THQHSTIRRAVDRIIFLHQGKVVWEGSVKEFDTTDEPIVRQFAEGSLEGPISY 513
THQHSTI+RAVDR++FLH+GKVVWEG +EF T+ PIV+QFA GSL+GPI Y
Sbjct: 228 THQHSTIKRAVDRLLFLHEGKVVWEGMTQEFTTSTNPIVKQFASGSLDGPIRY 280
>ref|NP_564850.1| ABC transporter family protein [Arabidopsis thaliana]
gi|13605495|gb|AAK32741.1|AF361573_1 At1g65410/T8F5_19
[Arabidopsis thaliana] gi|20334770|gb|AAM16246.1|
At1g65410/T8F5_19 [Arabidopsis thaliana]
Length = 345
Score = 212 bits (539), Expect = 3e-54
Identities = 106/173 (61%), Positives = 137/173 (78%), Gaps = 2/173 (1%)
Frame = +1
Query: 1 LTVGENVGFLLYEHSTLPEKKIRELVADSLGKVGLRGVEDLYPAELSGGMKKRVALARAV 180
L+V ENVGFLLYE S + E +I ELV +L VGL+GVE+ P+ELSGGMKKRVALAR++
Sbjct: 175 LSVRENVGFLLYERSKMSENQISELVTQTLAAVGLKGVENRLPSELSGGMKKRVALARSL 234
Query: 181 VSDVRTDV--EQVIMYDEPTAGLDPVASTVVEDLMRSLHAQATETMLDGKPSGISSYIVV 354
+ D +V +V++YDEPTAGLDP+ASTVVEDL+RS+H + + GKP I+SY+VV
Sbjct: 235 IFDTTKEVIEPEVLLYDEPTAGLDPIASTVVEDLIRSVHMTDEDAV--GKPGKIASYLVV 292
Query: 355 THQHSTIRRAVDRIIFLHQGKVVWEGSVKEFDTTDEPIVRQFAEGSLEGPISY 513
THQHSTI+RAVDR++FL++GK+VW+G EF T+ PIV+QFA GSL+GPI Y
Sbjct: 293 THQHSTIQRAVDRLLFLYEGKIVWQGMTHEFTTSTNPIVQQFATGSLDGPIRY 345
>ref|NP_484224.1| ATP-binding protein of ABC transporter [Nostoc sp. PCC 7120]
gi|25297056|pir||AD1829 ATP-binding protein of ABC
transporter alr0180 [imported] - Nostoc sp. (strain PCC
7120) gi|17135158|dbj|BAB77704.1| ATP-binding protein of
ABC transporter [Nostoc sp. PCC 7120]
Length = 260
Score = 195 bits (495), Expect = 4e-49
Identities = 99/174 (56%), Positives = 130/174 (73%), Gaps = 2/174 (1%)
Frame = +1
Query: 1 LTVGENVGFLLYEHSTLPEKKIRELVADSLGKVGLRGVEDLYPAELSGGMKKRVALARAV 180
LTV ENVGFLLY+HS L +IRELVA+ L VGLRG+ LYP+ELSGGM+KRV+ ARA+
Sbjct: 95 LTVEENVGFLLYQHSQLERSRIRELVAEKLEMVGLRGIGHLYPSELSGGMRKRVSFARAI 154
Query: 181 VSDVRTDVE--QVIMYDEPTAGLDPVASTVVEDLMRSLHAQATETMLDGKPSGISSYIVV 354
+S+ E +V++YDEPTAGLDP+ASTV+EDL+R L Q T + S+Y +V
Sbjct: 155 MSNPDNPAEGPEVLLYDEPTAGLDPIASTVIEDLIRDL--QCTHGV-------CSTYAIV 205
Query: 355 THQHSTIRRAVDRIIFLHQGKVVWEGSVKEFDTTDEPIVRQFAEGSLEGPISYV 516
THQ STIRR DR++FL+QG+V WEG+V + D+TD+P++ QF GS++GPI V
Sbjct: 206 THQDSTIRRTSDRLVFLYQGQVPWEGTVSDIDSTDDPLINQFVSGSVQGPIQVV 259
>pir||T02364 hypothetical protein T8F5.19 - Arabidopsis thaliana
gi|3335345|gb|AAC27147.1|AAC27147 Contains similarity to
ABC transporter gb|1651790 from Synechocystis sp.
gb|D90900. [Arabidopsis thaliana]
Length = 364
Score = 193 bits (491), Expect = 1e-48
Identities = 98/161 (60%), Positives = 127/161 (78%), Gaps = 2/161 (1%)
Frame = +1
Query: 1 LTVGENVGFLLYEHSTLPEKKIRELVADSLGKVGLRGVEDLYPAELSGGMKKRVALARAV 180
L+V ENVGFLLYE S + E +I ELV +L VGL+GVE+ P+ELSGGMKKRVALAR++
Sbjct: 175 LSVRENVGFLLYERSKMSENQISELVTQTLAAVGLKGVENRLPSELSGGMKKRVALARSL 234
Query: 181 VSDVRTDV--EQVIMYDEPTAGLDPVASTVVEDLMRSLHAQATETMLDGKPSGISSYIVV 354
+ D +V +V++YDEPTAGLDP+ASTVVEDL+RS+H T+ GKP I+SY+VV
Sbjct: 235 IFDTTKEVIEPEVLLYDEPTAGLDPIASTVVEDLIRSVH--MTDEDAVGKPGKIASYLVV 292
Query: 355 THQHSTIRRAVDRIIFLHQGKVVWEGSVKEFDTTDEPIVRQ 477
THQHSTI+RAVDR++FL++GK+VW+G EF T+ PIV+Q
Sbjct: 293 THQHSTIQRAVDRLLFLYEGKIVWQGMTHEFTTSTNPIVQQ 333
>ref|NP_440370.1| ABC transporter [Synechocystis sp. PCC 6803] gi|7445818|pir||S75010
ABC-type transport protein sll1001 - Synechocystis sp.
(strain PCC 6803) gi|1652125|dbj|BAA17050.1| ABC
transporter [Synechocystis sp. PCC 6803]
Length = 260
Score = 189 bits (481), Expect = 2e-47
Identities = 96/171 (56%), Positives = 120/171 (70%), Gaps = 2/171 (1%)
Frame = +1
Query: 1 LTVGENVGFLLYEHSTLPEKKIRELVADSLGKVGLRGVEDLYPAELSGGMKKRVALARAV 180
LTV ENVGF L EHS+L + IRE VAD L VGL G+ED YPA+LSGGM+KRV+ ARA+
Sbjct: 95 LTVAENVGFFLLEHSSLSREVIREQVADKLALVGLTGIEDYYPAQLSGGMRKRVSFARAI 154
Query: 181 VSDVR--TDVEQVIMYDEPTAGLDPVASTVVEDLMRSLHAQATETMLDGKPSGISSYIVV 354
+S+ D +VI+YDEPTAGLDP+ASTV+EDL+R L P G +YI+V
Sbjct: 155 MSNPHQPEDNPEVILYDEPTAGLDPIASTVIEDLVRRLQK---------SPGGCGTYIMV 205
Query: 355 THQHSTIRRAVDRIIFLHQGKVVWEGSVKEFDTTDEPIVRQFAEGSLEGPI 507
+HQ STIRR DR++ L+ GK+ W+G V D TD P+VRQF E +EGPI
Sbjct: 206 SHQESTIRRTADRVVLLYDGKIQWQGPVSAIDQTDNPLVRQFFEAKVEGPI 256
