Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001991A_C02 KCC001991A_c02
(556 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM67007.1| unknown [Arabidopsis thaliana] 105 5e-22
ref|NP_566953.1| expressed protein [Arabidopsis thaliana] gi|225... 105 5e-22
pir||T45792 hypothetical protein F26O13.250 - Arabidopsis thalia... 91 8e-18
dbj|BAC05829.1| seven transmembrane helix receptor [Homo sapiens] 40 0.021
ref|ZP_00090383.1| COG0411: ABC-type branched-chain amino acid t... 39 0.036
>gb|AAM67007.1| unknown [Arabidopsis thaliana]
Length = 227
Score = 105 bits (261), Expect = 5e-22
Identities = 51/120 (42%), Positives = 75/120 (62%)
Frame = +2
Query: 197 VLASLSPLALATTFRDGDYIHTSRKAQFHQSRTNWQDLLGQHCPRFGIDRLVAVPIPKPQ 376
VL SLS L++ +R GD + S+ Q+H SRT W D++G+HCP F ++R V +PI KP
Sbjct: 18 VLISLSFPFLSSAYRPGDIVRMSKMGQYHSSRTTWHDVIGKHCPIFAVNREVLIPIAKP- 76
Query: 377 LAFGKGDTYKLQFSFDGDRHLTPWLPLLGEGAPAVPLIIVTLRRSGEELLGATAAVLDAP 556
+ + D YK++F ++ L WL ++ + VP+I V LR SG +LLG TA V+D P
Sbjct: 77 IGYTGTDPYKIKFQVGSEKFLIHWLLVINRKSSEVPMIDVNLRYSGGDLLGVTAQVIDMP 136
>ref|NP_566953.1| expressed protein [Arabidopsis thaliana] gi|22531176|gb|AAM97092.1|
putative protein [Arabidopsis thaliana]
gi|30023682|gb|AAP13374.1| At3g51610 [Arabidopsis
thaliana]
Length = 230
Score = 105 bits (261), Expect = 5e-22
Identities = 51/120 (42%), Positives = 75/120 (62%)
Frame = +2
Query: 197 VLASLSPLALATTFRDGDYIHTSRKAQFHQSRTNWQDLLGQHCPRFGIDRLVAVPIPKPQ 376
VL SLS L++ +R GD + S+ Q+H SRT W D++G+HCP F ++R V +PI KP
Sbjct: 21 VLISLSFPFLSSAYRPGDIVRMSKMGQYHSSRTTWHDVIGKHCPIFAVNREVLIPIAKP- 79
Query: 377 LAFGKGDTYKLQFSFDGDRHLTPWLPLLGEGAPAVPLIIVTLRRSGEELLGATAAVLDAP 556
+ + D YK++F ++ L WL ++ + VP+I V LR SG +LLG TA V+D P
Sbjct: 80 IGYTGTDPYKIKFQVGSEKFLIHWLLVINRKSSEVPMIDVNLRYSGGDLLGVTAQVIDMP 139
>pir||T45792 hypothetical protein F26O13.250 - Arabidopsis thaliana
gi|4902482|emb|CAB43523.1| hypothetical protein
[Arabidopsis thaliana] gi|6572082|emb|CAB63025.1|
putative protein [Arabidopsis thaliana]
Length = 189
Score = 91.3 bits (225), Expect = 8e-18
Identities = 42/98 (42%), Positives = 62/98 (62%)
Frame = +2
Query: 263 SRKAQFHQSRTNWQDLLGQHCPRFGIDRLVAVPIPKPQLAFGKGDTYKLQFSFDGDRHLT 442
S+ Q+H SRT W D++G+HCP F ++R V +PI KP + + D YK++F ++ L
Sbjct: 2 SKMGQYHSSRTTWHDVIGKHCPIFAVNREVLIPIAKP-IGYTGTDPYKIKFQVGSEKFLI 60
Query: 443 PWLPLLGEGAPAVPLIIVTLRRSGEELLGATAAVLDAP 556
WL ++ + VP+I V LR SG +LLG TA V+D P
Sbjct: 61 HWLLVINRKSSEVPMIDVNLRYSGGDLLGVTAQVIDMP 98
>dbj|BAC05829.1| seven transmembrane helix receptor [Homo sapiens]
Length = 984
Score = 40.0 bits (92), Expect = 0.021
Identities = 42/135 (31%), Positives = 48/135 (35%), Gaps = 9/135 (6%)
Frame = -3
Query: 551 RPAPPQLPLAAPPPTAAGSLL*AVLPALPRPAEAATA*GAGRRR---------TRTAACR 399
RPA +APPP PA P PA AA A RRR + C
Sbjct: 484 RPAQAPPGASAPPP-----------PAPPPPAGAAAAGTRERRRLCAQVTAPLSPLNGCV 532
Query: 398 CHPCRTQAAALGWAPPPSGRYQTGDSAAPASPASSSATDGIALSLMCGCNHRHERL*RAP 219
R+ AA WAPP + G APAS + P
Sbjct: 533 ARAARSNRAASTWAPPSGPPTRPGSPDAPASSPDPT-----------------------P 569
Query: 218 RATARQGPKAEARGS 174
RAT R P+ EARGS
Sbjct: 570 RATQR--PELEARGS 582
>ref|ZP_00090383.1| COG0411: ABC-type branched-chain amino acid transport systems,
ATPase component [Azotobacter vinelandii]
Length = 393
Score = 39.3 bits (90), Expect = 0.036
Identities = 28/67 (41%), Positives = 31/67 (45%)
Frame = -3
Query: 476 PALPRPAEAATA*GAGRRRTRTAACRCHPCRTQAAALGWAPPPSGRYQTGDSAAPASPAS 297
PA PR AA GA R R AA R HP R AAA G A R D+ A A+
Sbjct: 80 PARPRARRAALDRGAAARAARPAASRTHPARRPAAAAGAAVAGPAR----DAGAGRMNAA 135
Query: 296 SSATDGI 276
SA + I
Sbjct: 136 VSAAEAI 142
