KCC001973A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001973A_C01 KCC001973A_c01
aGTAGTCCACTGAGGTCATCTACAAGGCCTGCCAGCTCTCTTTGCTCGGTGTACACGTAT
TGATCTGGGCGCGCCTGCGTGTCCCTCCCCCAAAAATGCGCTCCCTCCTCGTTGTCGCCC
TGGTGGGCGCCCTCGCGCTCACTGCTCACGCGGCGGGTGGCGGTGGTGATGACCCGACCA
TCAAGCTCGAGAATGTGCACGACCTGACCCCCGACAACTTTGACAAGATTGTGAACGGCG
CCAAGCACGTGCTGATTGAGTTCTACGCCCCTTGGTGCGGCCACTGCAAGCGCATGGTGC
CCGAGTACAAGAAGCTGGGCGAGCTGGTGGCAGCGGACCCCAAGCTCAAGAACCGCGTGG
TGGTGGCCAAGGTGAACGCCGACGCTCACCGCTCCCTGGGTGACAAGTTCGATGTGCGCG
GCTTCCCTACCATCAAGTTCTTCCCCGCTGGCAAGCCCGCCACCAAGGACAACATGCAGG
ACTACAACCAGGCCCGCACCGCCTCCGCCTTCCTGGACTTCCTCAAGGAGAAGCTGGCCG
CGGACAAGGGCTT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001973A_C01 KCC001973A_c01
         (553 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_182269.1| protein disulfide isomerase family [Arabidopsis...   112  3e-24
pir||T03644 probable protein disulfide-isomerase (EC 5.3.4.1) pr...   108  5e-23
sp|P38661|ERP5_MEDSA PROBABLE PROTEIN DISULFIDE ISOMERASE P5 PRE...   107  1e-22
dbj|BAB67990.1| putative protein disulfide isomerase [Oryza sati...   106  2e-22
emb|CAD11865.1| disulfide isomerase [Ostertagia ostertagi]            105  3e-22

>ref|NP_182269.1| protein disulfide isomerase family [Arabidopsis thaliana]
           gi|11132051|sp|O22263|PDA6_ARATH Probable protein
           disulfide isomerase A6 precursor (P5)
           gi|7488158|pir||T00437 probable protein
           disulfide-isomerase (EC 5.3.4.1) precursor - Arabidopsis
           thaliana gi|2529680|gb|AAC62863.1| putative protein
           disulfide-isomerase [Arabidopsis thaliana]
           gi|18377789|gb|AAL67044.1| putative protein
           disulfide-isomerase [Arabidopsis thaliana]
           gi|20259223|gb|AAM14327.1| putative protein
           disulfide-isomerase [Arabidopsis thaliana]
           gi|24417274|gb|AAN60247.1| unknown [Arabidopsis
           thaliana]
          Length = 361

 Score =  112 bits (281), Expect = 3e-24
 Identities = 65/138 (47%), Positives = 84/138 (60%), Gaps = 3/138 (2%)
 Frame = +3

Query: 129 ALALTAHAAGGGGDDPTIKLENVHDLTPDNFDKIV-NGAKHVLIEFYAPWCGHCKRMVPE 305
           ALA   +  GG         +NV  LTPDNFD+IV +  K VL+EFYAPWCGHCK + P 
Sbjct: 121 ALAEYVNKEGGTNVKLAAVPQNVVVLTPDNFDEIVLDQNKDVLVEFYAPWCGHCKSLAPT 180

Query: 306 YKKLGELVAADPKLKNRVVVAKVNADAHRSLGDKFDVRGFPTIKFFPAGKPATKDNM--Q 479
           Y+K    VA   K +  VV+A ++ADAH++LG+K+ V GFPT+KFFP      KDN    
Sbjct: 181 YEK----VATVFKQEEGVVIANLDADAHKALGEKYGVSGFPTLKFFP------KDNKAGH 230

Query: 480 DYNQARTASAFLDFLKEK 533
           DY+  R    F+ F+ EK
Sbjct: 231 DYDGGRDLDDFVSFINEK 248

 Score = 93.6 bits (231), Expect = 2e-18
 Identities = 48/115 (41%), Positives = 70/115 (60%)
 Frame = +3

Query: 189 ENVHDLTPDNFDKIVNGAKHVLIEFYAPWCGHCKRMVPEYKKLGELVAADPKLKNRVVVA 368
           ++V  LT D+F+K V   K  L+EFYAPWCGHCK++ PEY+KLG    A  K    V++A
Sbjct: 23  DDVVVLTDDSFEKEVGKDKGALVEFYAPWCGHCKKLAPEYEKLG----ASFKKAKSVLIA 78

Query: 369 KVNADAHRSLGDKFDVRGFPTIKFFPAGKPATKDNMQDYNQARTASAFLDFLKEK 533
           KV+ D  +S+  K+ V G+PTI++FP G        Q Y   R A A  +++ ++
Sbjct: 79  KVDCDEQKSVCTKYGVSGYPTIQWFPKGSL----EPQKYEGPRNAEALAEYVNKE 129

>pir||T03644 probable protein disulfide-isomerase (EC 5.3.4.1) precursor -
           common tobacco gi|1848212|emb|CAA72092.1| protein
           disulfide-isomerase precursor [Nicotiana tabacum]
          Length = 359

 Score =  108 bits (270), Expect = 5e-23
 Identities = 61/136 (44%), Positives = 82/136 (59%), Gaps = 1/136 (0%)
 Frame = +3

Query: 129 ALALTAHAAGGGGDDPTIKLENVHDLTPDNFDKIV-NGAKHVLIEFYAPWCGHCKRMVPE 305
           ALA   ++ GG          +V  L+PDNFD+IV +  K VL+EFYAPWCGHCK + P 
Sbjct: 122 ALAEFVNSEGGTNVKIASTPSSVVVLSPDNFDEIVLDETKDVLVEFYAPWCGHCKSLAPI 181

Query: 306 YKKLGELVAADPKLKNRVVVAKVNADAHRSLGDKFDVRGFPTIKFFPAGKPATKDNMQDY 485
           Y+K    VA   K +  VV+A ++AD HR LG+K+ V GFPT+KFFP G  A     + Y
Sbjct: 182 YEK----VATSFKQEEDVVIANLDADKHRDLGEKYGVSGFPTLKFFPKGNKAG----EHY 233

Query: 486 NQARTASAFLDFLKEK 533
           +  R    F++F+ EK
Sbjct: 234 DGGRHLYDFVNFINEK 249

 Score = 98.2 bits (243), Expect = 6e-20
 Identities = 49/115 (42%), Positives = 74/115 (63%)
 Frame = +3

Query: 189 ENVHDLTPDNFDKIVNGAKHVLIEFYAPWCGHCKRMVPEYKKLGELVAADPKLKNRVVVA 368
           E+V  LT +NF+K +   +  L+EFYAPWCGHCK++ PEY+KLG   A+  K K+ +++ 
Sbjct: 24  EDVVVLTEENFEKEIGQDRAALVEFYAPWCGHCKKLAPEYEKLG---ASFRKAKS-ILIG 79

Query: 369 KVNADAHRSLGDKFDVRGFPTIKFFPAGKPATKDNMQDYNQARTASAFLDFLKEK 533
           KV+ D H+S+  K+ V+G+PTI++FP G    K     Y   RTA A  +F+  +
Sbjct: 80  KVDCDEHKSVCSKYGVQGYPTIQWFPKGSLEPK----KYEGGRTAEALAEFVNSE 130

>sp|P38661|ERP5_MEDSA PROBABLE PROTEIN DISULFIDE ISOMERASE P5 PRECURSOR
           gi|7488740|pir||T09614 probable protein
           disulfide-isomerase (EC 5.3.4.1) precursor,
           glucose-regulated [similarity] - alfalfa
           gi|166380|gb|AAB46930.1| glucose-regulated endoplasmic
           reticular protein precursor [Medicago sativa]
          Length = 364

 Score =  107 bits (266), Expect = 1e-22
 Identities = 59/136 (43%), Positives = 82/136 (59%), Gaps = 1/136 (0%)
 Frame = +3

Query: 129 ALALTAHAAGGGGDDPTIKLENVHDLTPDNFDKIV-NGAKHVLIEFYAPWCGHCKRMVPE 305
           +LA   +  GG          +V  LTP+ F+++V +G K VL+EFYAPWCGHCK + P 
Sbjct: 127 SLAEFVNTEGGTNVKIATAPSHVVVLTPETFNEVVLDGTKDVLVEFYAPWCGHCKSLAPI 186

Query: 306 YKKLGELVAADPKLKNRVVVAKVNADAHRSLGDKFDVRGFPTIKFFPAGKPATKDNMQDY 485
           Y+K    VAA  K ++ VV+A ++AD +R L +K+DV GFPT+KFFP G  A     +DY
Sbjct: 187 YEK----VAAVFKSEDDVVIANLDADKYRDLAEKYDVSGFPTLKFFPKGNKAG----EDY 238

Query: 486 NQARTASAFLDFLKEK 533
              R    F+ F+ EK
Sbjct: 239 GGGRDLDDFVAFINEK 254

 Score = 94.0 bits (232), Expect = 1e-18
 Identities = 47/116 (40%), Positives = 70/116 (59%)
 Frame = +3

Query: 177 TIKLENVHDLTPDNFDKIVNGAKHVLIEFYAPWCGHCKRMVPEYKKLGELVAADPKLKNR 356
           ++  ++V  LT +NF+K V   K  L+EFYAPWCGHCK++ PEY+KL        K    
Sbjct: 25  SVSADDVVVLTEENFEKEVGHDKGALVEFYAPWCGHCKKLAPEYEKLPNSF----KKAKS 80

Query: 357 VVVAKVNADAHRSLGDKFDVRGFPTIKFFPAGKPATKDNMQDYNQARTASAFLDFL 524
           V++AKV+ D H+S+  K+ V G+PTI++FP G    K     +   RTA +  +F+
Sbjct: 81  VLIAKVDCDEHKSVCSKYGVSGYPTIQWFPKGSLEPK----KFEGPRTAESLAEFV 132

>dbj|BAB67990.1| putative protein disulfide isomerase [Oryza sativa (japonica
           cultivar-group)]
          Length = 371

 Score =  106 bits (264), Expect = 2e-22
 Identities = 58/141 (41%), Positives = 80/141 (56%), Gaps = 1/141 (0%)
 Frame = +3

Query: 129 ALALTAHAAGGGGDDPTIKLENVHDLTPDNFDKIV-NGAKHVLIEFYAPWCGHCKRMVPE 305
           ALA   +  GG          +V  L PDNFD IV +  K +L+EFYAPWCGHCK + P 
Sbjct: 133 ALAEFVNTEGGTNVKLATIPSSVVVLGPDNFDSIVLDENKDILVEFYAPWCGHCKHLAPI 192

Query: 306 YKKLGELVAADPKLKNRVVVAKVNADAHRSLGDKFDVRGFPTIKFFPAGKPATKDNMQDY 485
           Y+KL  +     KL + VV+A ++AD H+ L +K+ V G+PT+KFFP G  A     +DY
Sbjct: 193 YEKLASVY----KLDDGVVIANLDADKHKDLAEKYGVSGYPTLKFFPKGNKAG----EDY 244

Query: 486 NQARTASAFLDFLKEKLAADK 548
           +  R    F+ F+ EK    +
Sbjct: 245 DGGRELDDFVKFINEKCGTSR 265

 Score = 97.4 bits (241), Expect = 1e-19
 Identities = 60/152 (39%), Positives = 81/152 (52%), Gaps = 3/152 (1%)
 Frame = +3

Query: 78  RVPPPKMRSL---LVVALVGALALTAHAAGGGGDDPTIKLENVHDLTPDNFDKIVNGAKH 248
           R+ P K   L   L +AL  A A  A A G          ++V  LT   F+K V   + 
Sbjct: 5   RISPRKTLPLFAALALALAWAFAAPAFADG----------DDVVALTESTFEKEVGQDRG 54

Query: 249 VLIEFYAPWCGHCKRMVPEYKKLGELVAADPKLKNRVVVAKVNADAHRSLGDKFDVRGFP 428
            L+EFYAPWCGHCK++ PEY+KLG    A  K    V +AKV+ D H+S+  K+ V G+P
Sbjct: 55  ALVEFYAPWCGHCKKLAPEYEKLG----ASFKKAKSVFIAKVDCDEHKSVCSKYGVSGYP 110

Query: 429 TIKFFPAGKPATKDNMQDYNQARTASAFLDFL 524
           TI++FP G    K     Y   R+A A  +F+
Sbjct: 111 TIQWFPKGSLEPK----KYEGQRSAEALAEFV 138

>emb|CAD11865.1| disulfide isomerase [Ostertagia ostertagi]
          Length = 493

 Score =  105 bits (263), Expect = 3e-22
 Identities = 59/141 (41%), Positives = 87/141 (60%), Gaps = 1/141 (0%)
 Frame = +3

Query: 114 VALVGALALTAHAAGGGGDDPTIKLE-NVHDLTPDNFDKIVNGAKHVLIEFYAPWCGHCK 290
           +A V  LAL+A AA       T++ E NV  LT DNFD+++NG + VL EFYAPWCGHCK
Sbjct: 4   LACVCLLALSAFAA-------TVEEEKNVIVLTKDNFDEVINGHEFVLAEFYAPWCGHCK 56

Query: 291 RMVPEYKKLGELVAADPKLKNRVVVAKVNADAHRSLGDKFDVRGFPTIKFFPAGKPATKD 470
            + PEY+K    +  +    + + +AK++A  H  +  KF+VRG+PT+K F  GKP+   
Sbjct: 57  ALAPEYEKTATQLKEE---GSEIKLAKLDATVHGDVASKFEVRGYPTLKLFRNGKPS--- 110

Query: 471 NMQDYNQARTASAFLDFLKEK 533
              +Y   R A++ + +LK+K
Sbjct: 111 ---EYTGGRDAASIVAWLKKK 128

 Score = 83.6 bits (205), Expect = 2e-15
 Identities = 45/109 (41%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
 Frame = +3

Query: 204 LTPDNFDKIV-NGAKHVLIEFYAPWCGHCKRMVPEYKKLGELVAADPKLKNRVVVAKVNA 380
           L   NF+++  +  K+VL+EFYAPWCGHCK++ P + KLGE  A        +++AK++A
Sbjct: 368 LVGKNFEQVARDNTKNVLVEFYAPWCGHCKQLAPTWDKLGEKYAD----HENIIIAKMDA 423

Query: 381 DAHRSLGDKFDVRGFPTIKFFPAGKPATKDNMQDYNQARTASAFLDFLK 527
            A+    +   V+ FPTIKFFPAG     + + DY   RT   F  FL+
Sbjct: 424 TANEV--EDVKVQSFPTIKFFPAG----SNKVIDYTGDRTLEGFTKFLE 466



EST assemble image


clone accession position
1 MX045b07_r BP087861 1 363
2 LC051f10_r AV622593 2 531
3 MX205h11_r BP089368 5 443
4 LC090d08_r AV625285 6 506
5 LC042g08_r AV621931 6 525
6 MX064h12_r BP088610 6 407
7 MX033g02_r BP087398 7 382
8 MX038d02_r BP087595 10 369
9 MX022c02_r BP086988 10 422
10 HC037a03_r AV634721 15 525
11 MX012g03_r BP086606 15 399
12 LC089a04_r AV625184 16 498
13 LC040e09_r AV621757 23 504
14 LC042e05_r AV621911 27 553
15 HC075h01_r AV637653 45 496
16 MX015g11_r BP086744 143 449




Chlamydomonas reinhardtii
Kazusa DNA Research Institute