KCC001963A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001963A_C01 KCC001963A_c01
CTGATTCGTGCCTTGATTTAAGCGCCGTGCGCTATTACATCGCTCCCTGCGACGCGAGTG
TAACCTTGGTGACGCGGCGAGCATACCTGGCAGAATGGCGCCGCACCGTGAAGCGTGCAT
CGCTCTCGTGGCCACGCTCGTGCTGGTGGCGCAAGCTGCAGGCAGCACCATCACCGTTTT
CGGAGACCGGGTCAAGCATCCGTCGGCTTCCAAGGAGTATGTGCGCACGTACGTCAAGGT
ACCCAAGGAGCACGACTCCATGACACCCGTTGTCACCGTGGGCGTGGAGCTGACCCTGGG
CTTCATCCGCCGCGCTCAGGACCTGCCCGCCACCGTCCGCATGGAGATCCCCCTGGGCCC
CAACATGGTCTTCAACTACACCGGCAACGAGTACAACCAGATGTTCCCCGACGTGGGCAA
CAGCCCCTTCACCTTTCTGTACTGGGGCTTCAACTGGAACGGCCACCCGCCCCCCGGCAT
CTACGACAACCCCCACTTCGACTTCCACTTCATGATGAAGCCGTACGACTACTGGTGGAA
CGAGTACAACCCCTCCGCACACGGCGAGTGCGGCGGCCTCAGCAACG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001963A_C01 KCC001963A_c01
         (587 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAE17706.1| Hypothetical protein C30H6.11 [Caenorhabditis el...    61  1e-08
pir||T45463 membrane glycoprotein [imported] - equine herpesviru...    59  7e-08
gb|AAK61482.1| glycoprotein gp2 [Equine herpesvirus 1]                 59  7e-08
pir||A43932 mucin 2 precursor, intestinal - human (fragments)          58  9e-08
gb|AAA59163.1| mucin                                                   58  9e-08

>emb|CAE17706.1| Hypothetical protein C30H6.11 [Caenorhabditis elegans]
          Length = 519

 Score = 61.2 bits (147), Expect = 1e-08
 Identities = 41/140 (29%), Positives = 65/140 (46%)
 Frame = +3

Query: 168 PSPFSETGSSIRRLPRSMCARTSRYPRSTTP*HPLSPWAWS*PWASSAALRTCPPPSAWR 347
           P+  + T ++      +    T+  P +TTP    +      P  ++    T P  +   
Sbjct: 95  PTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTT-----PTTTTTETTTTPTTTTTE 149

Query: 348 SPWAPTWSSTTPATSTTRCSPTWATAPSPFCTGASTGTATRPPASTTTPTSTSTS**SRT 527
           +   PT ++TTP T+TT  +PT  T      T   T T T P  +TT PT+T+T+  + T
Sbjct: 150 TTTTPTTTTTTPTTTTT--TPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTT 207

Query: 528 TTGGTSTTPPHTASAAASAT 587
           TT  T+TT P T +   + T
Sbjct: 208 TTPTTTTTVPTTTTTTPTTT 227

 Score = 61.2 bits (147), Expect = 1e-08
 Identities = 42/143 (29%), Positives = 67/143 (46%)
 Frame = +3

Query: 159 QAAPSPFSETGSSIRRLPRSMCARTSRYPRSTTP*HPLSPWAWS*PWASSAALRTCPPPS 338
           +   +P + T ++    P +    T+  P +TT     +P   +    ++    T    +
Sbjct: 115 ETTTTPTTTTPTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTT 174

Query: 339 AWRSPWAPTWSSTTPATSTTRCSPTWATAPSPFCTGASTGTATRPPASTTTPTSTSTS** 518
              +   PT ++TTP T+TT  +PT  T      T   T T T P  +TTTPT+T+T+  
Sbjct: 175 PTTTTTTPTTTTTTPTTTTT--APTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTT-- 230

Query: 519 SRTTTGGTSTTPPHTASAAASAT 587
             TTT  T+TT P T +  A+ T
Sbjct: 231 --TTTPTTTTTTPTTTTTPATTT 251

 Score = 56.2 bits (134), Expect = 3e-07
 Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
 Frame = +3

Query: 303 SSAALRTCPPPSAWRSPWAPTWSSTTPATSTTRCSPTWATAPSPFCTGASTGTATRPPAS 482
           +++   T  P +   +   PT ++TTP T+TT  + T  T  +P     +T T T P  +
Sbjct: 69  TTSTTTTTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTT 128

Query: 483 TTTPTSTSTS**S--RTTTGGTSTTPPHTASAAASAT 587
           TTTPT+T+T   +   TTT  T+TTP  T +   + T
Sbjct: 129 TTTPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTT 165

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 36/119 (30%), Positives = 56/119 (46%)
 Frame = +3

Query: 231 TSRYPRSTTP*HPLSPWAWS*PWASSAALRTCPPPSAWRSPWAPTWSSTTPATSTTRCSP 410
           T+    +TTP  P +         ++    T  P +   +   PT  +TT  T+TT  + 
Sbjct: 69  TTSTTTTTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTT 128

Query: 411 TWATAPSPFCTGASTGTATRPPASTTTPTSTSTS**SRTTTGGTSTTPPHTASAAASAT 587
           T  T P+   T  +T   T    +TTTPT+T+T+  + TTT  T+TT P T +   + T
Sbjct: 129 T--TTPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTT 185

 Score = 45.8 bits (107), Expect = 4e-04
 Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 9/99 (9%)
 Frame = +3

Query: 318 RTCPPPSAWR--------SPWAPTW-SSTTPATSTTRCSPTWATAPSPFCTGASTGTATR 470
           R+C    AW         S  +P W  +    TSTT  S T  T P+   T  +T T T 
Sbjct: 33  RSCTGSVAWALCKYDPNTSIISPKWVKADCTTTSTTTTSTTTTTTPTTPTTTTTTPTTTT 92

Query: 471 PPASTTTPTSTSTS**SRTTTGGTSTTPPHTASAAASAT 587
              +TTT T T+T+  + T T  T+TTP  T     + T
Sbjct: 93  TTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTT 131

 Score = 42.4 bits (98), Expect = 0.005
 Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
 Frame = +3

Query: 210 PRSMCARTSRYPRSTTP*HPLSPWAWS*PWASSAALRTCPPPSAWRSPW----APTWSST 377
           P +    T+  P +TT   P +         ++    T  P +   +P     APT ++T
Sbjct: 143 PTTTTTETTTTPTTTTT-TPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTT 201

Query: 378 TPATSTTRCSPTWATAPSPFCTGASTGTATRPPASTTTPTSTSTS**SRTTTGGTS 545
           TP T+TT  + T  T P+   T  +T T T    +TTT T T+T+  + TT+ G +
Sbjct: 202 TPTTTTTTPTTT-TTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTSVGNN 256

>pir||T45463 membrane glycoprotein [imported] - equine herpesvirus 1
           gi|2114323|dbj|BAA20038.1| membrane glycoprotein [Equine
           herpesvirus 1]
          Length = 867

 Score = 58.5 bits (140), Expect = 7e-08
 Identities = 50/182 (27%), Positives = 77/182 (41%)
 Frame = +3

Query: 42  APCDASVTLVTRRAYLAEWRRTVKRASLSWPRSCWWRKLQAAPSPFSETGSSIRRLPRSM 221
           AP  AS T     +   E   T   AS + P +       AA +    T +S      + 
Sbjct: 90  APSTASSTTSIPTSTSTETTTTTPTASTTTPTTTTAAPTTAATTTAVTTAASTSAETTTA 149

Query: 222 CARTSRYPRSTTP*HPLSPWAWS*PWASSAALRTCPPPSAWRSPWAPTWSSTTPATSTTR 401
            A  +  P +TTP             +++    T   P+   +    T ++TT A +TT 
Sbjct: 150 TATATSTPTTTTP------------TSTTTTTATTTVPTTASTTTDTTTAATTTAATTTA 197

Query: 402 CSPTWATAPSPFCTGASTGTATRPPASTTTPTSTSTS**SRTTTGGTSTTPPHTASAAAS 581
            + T AT  +   T A+T  AT   A+TT  T+T+ +  + TTT  T+T    TA+  +S
Sbjct: 198 ATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTSS 257

Query: 582 AT 587
           AT
Sbjct: 258 AT 259

 Score = 54.3 bits (129), Expect = 1e-06
 Identities = 48/136 (35%), Positives = 63/136 (46%), Gaps = 10/136 (7%)
 Frame = +3

Query: 210 PRSMCARTSRYPRSTTP*HPLSPWAWS*PWASSAALRTCPPPSAWRSPWAPTWSST---- 377
           P +    TS  P ++T  H  SP + S   +S+AA  +  P +A  +   PT +ST    
Sbjct: 53  PTTSPPTTSSSPPTST--HTSSPSSTSTQSSSTAATSSSAPSTASSTTSIPTSTSTETTT 110

Query: 378 -TPATS-----TTRCSPTWATAPSPFCTGASTGTATRPPASTTTPTSTSTS**SRTTTGG 539
            TP  S     TT  +PT A   +   T AST   T    +T T T T+T+  S TTT  
Sbjct: 111 TTPTASTTTPTTTTAAPTTAATTTAVTTAASTSAETTTATATATSTPTTTTPTSTTTTTA 170

Query: 540 TSTTPPHTASAAASAT 587
           T TT P TAS     T
Sbjct: 171 T-TTVPTTASTTTDTT 185

 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 34/94 (36%), Positives = 52/94 (55%)
 Frame = +3

Query: 300 ASSAALRTCPPPSAWRSPWAPTWSSTTPATSTTRCSPTWATAPSPFCTGASTGTATRPPA 479
           A++AA  T    +A  +  A T ++TT A +TT  + T AT  +   T A+T  AT   A
Sbjct: 258 ATTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAA 317

Query: 480 STTTPTSTSTS**SRTTTGGTSTTPPHTASAAAS 581
           +TT  T+T+ +     T+G TSTT   T++ +AS
Sbjct: 318 TTTAATTTAATTTGSPTSGSTSTTGASTSTPSAS 351

 Score = 52.4 bits (124), Expect = 5e-06
 Identities = 39/96 (40%), Positives = 55/96 (56%), Gaps = 1/96 (1%)
 Frame = +3

Query: 303 SSAALRTCPPPSAWRSPWAPTWSSTTPATSTTRCSPTWATAPSPFCTGASTGTATRPPAS 482
           ++AA  T    +A  +  A T ++TT A +TT  + T AT  +   T A+T  AT   A+
Sbjct: 269 TTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAAT 328

Query: 483 TT-TPTSTSTS**SRTTTGGTSTTPPHTASAAASAT 587
           TT +PTS STS     TTG +++TP  +AS A SAT
Sbjct: 329 TTGSPTSGSTS-----TTGASTSTP--SASTATSAT 357

 Score = 51.6 bits (122), Expect = 8e-06
 Identities = 36/96 (37%), Positives = 53/96 (54%), Gaps = 1/96 (1%)
 Frame = +3

Query: 303 SSAALRTCPPPSAWRSPWAPTWSSTTPATSTTRCSPTWA-TAPSPFCTGASTGTATRPPA 479
           ++AA  T    +A  +  A T ++TT A +TT  + T + T+ S   TGAST T +   A
Sbjct: 294 TTAATTTAATTTAATTTAATTTAATTTAATTTAATTTGSPTSGSTSTTGASTSTPSASTA 353

Query: 480 STTTPTSTSTS**SRTTTGGTSTTPPHTASAAASAT 587
           ++ TPTSTSTS         TST  P +A+ +A +T
Sbjct: 354 TSATPTSTSTS-----AAATTSTPTPTSAATSAEST 384

 Score = 47.4 bits (111), Expect = 2e-04
 Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
 Frame = +3

Query: 303 SSAALRTCPPPSAWRSPWAPTWSSTTPATSTTRCSP--TWATAPSPFCTGASTGTATRPP 476
           +S++  T  PP+   SP   T +S+  +TST   S   T ++APS   +  S  T+T   
Sbjct: 48  NSSSSPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTASSTTSIPTSTSTE 107

Query: 477 ASTTTPTSTSTS**SRTTTGGTSTTPPHTASAAASAT 587
            +TTTPT+++T+    TTT   +T    TA   A++T
Sbjct: 108 TTTTTPTASTTT--PTTTTAAPTTAATTTAVTTAAST 142

 Score = 41.6 bits (96), Expect = 0.008
 Identities = 29/94 (30%), Positives = 46/94 (48%)
 Frame = +3

Query: 303 SSAALRTCPPPSAWRSPWAPTWSSTTPATSTTRCSPTWATAPSPFCTGASTGTATRPPAS 482
           S+    T  P ++  +   PT +ST+ A +T+  +PT A   +   T A T T   P   
Sbjct: 339 STTGASTSTPSASTATSATPTSTSTSAAATTSTPTPTSAATSAESTTEAPTST---PTTD 395

Query: 483 TTTPTSTSTS**SRTTTGGTSTTPPHTASAAASA 584
           TTTP+  +T+    TT+  ++T    T SA  +A
Sbjct: 396 TTTPSEATTA----TTSPESTTVSASTTSATTTA 425

 Score = 40.0 bits (92), Expect = 0.024
 Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
 Frame = +3

Query: 300 ASSAALRTCPPPSAWRSPWAPTWSSTTPATSTTRCSPTWATAPSPFCTGASTGTATRPPA 479
           A++ A  T   P++  +      +ST  A++ T  +PT  +  +   T   T T+    A
Sbjct: 322 ATTTAATTTGSPTSGSTSTTGASTSTPSASTATSATPTSTSTSAAATTSTPTPTSAATSA 381

Query: 480 STTTPTSTSTS**SRTT--TGGTSTTPPHTASAAASAT 587
            +TT   TST     TT     T+TT P + + +AS T
Sbjct: 382 ESTTEAPTSTPTTDTTTPSEATTATTSPESTTVSASTT 419

 Score = 38.5 bits (88), Expect = 0.071
 Identities = 31/108 (28%), Positives = 48/108 (43%), Gaps = 14/108 (12%)
 Frame = +3

Query: 306 SAALRTCPPPSAWRSPWAPTWSSTTPATSTTRCSPTW----------ATAPSPFCTGAST 455
           SA+  T   P++  +  A T S+ TP ++ T    T            T PS   T  ++
Sbjct: 349 SASTATSATPTSTSTSAAATTSTPTPTSAATSAESTTEAPTSTPTTDTTTPSEATTATTS 408

Query: 456 GTATRPPASTTTPTSTSTS**SRTT----TGGTSTTPPHTASAAASAT 587
             +T   ASTT+ T+T+ +  S T+    TG TST  P +      +T
Sbjct: 409 PESTTVSASTTSATTTAFTTESHTSPDSSTGSTSTAEPSSTFTLTPST 456

 Score = 38.1 bits (87), Expect = 0.092
 Identities = 28/75 (37%), Positives = 42/75 (55%), Gaps = 2/75 (2%)
 Frame = +3

Query: 363 TWSSTTPATSTTRCSPTWATAPSPFCTGASTGTATRPPASTTT--PTSTSTS**SRTTTG 536
           T SS+T  +  +  S T  ++ SP  T +   T++ PP ST T  P+STST     ++T 
Sbjct: 30  TSSSSTSGSGQSTSSGTTNSSSSP--TTSPPTTSSSPPTSTHTSSPSSTST---QSSSTA 84

Query: 537 GTSTTPPHTASAAAS 581
            TS++ P TAS+  S
Sbjct: 85  ATSSSAPSTASSTTS 99

 Score = 37.4 bits (85), Expect = 0.16
 Identities = 31/90 (34%), Positives = 40/90 (44%), Gaps = 22/90 (24%)
 Frame = +3

Query: 372 STTPATSTTRCSPTWATAPSPFCTGASTGTATRPPASTTT-------------------- 491
           ST+  T+ +  SPT  T+P    +   T T T  P+ST+T                    
Sbjct: 41  STSSGTTNSSSSPT--TSPPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTASSTT 98

Query: 492 --PTSTSTS**SRTTTGGTSTTPPHTASAA 575
             PTSTST   + TTT   STT P T +AA
Sbjct: 99  SIPTSTSTE--TTTTTPTASTTTPTTTTAA 126

 Score = 36.6 bits (83), Expect = 0.27
 Identities = 24/72 (33%), Positives = 38/72 (52%)
 Frame = +3

Query: 372 STTPATSTTRCSPTWATAPSPFCTGASTGTATRPPASTTTPTSTSTS**SRTTTGGTSTT 551
           STT   +TT  S T  +  S      S+GT     + TT+P +TS+S  + T T   S+T
Sbjct: 22  STTTTETTTSSSSTSGSGQS-----TSSGTTNSSSSPTTSPPTTSSSPPTSTHTSSPSST 76

Query: 552 PPHTASAAASAT 587
              ++S AA+++
Sbjct: 77  STQSSSTAATSS 88

 Score = 36.6 bits (83), Expect = 0.27
 Identities = 41/144 (28%), Positives = 57/144 (39%), Gaps = 2/144 (1%)
 Frame = +3

Query: 162 AAPSPFSETGSSIRRLPRSMCARTSRYPRSTTP*HPLSPWAWS*PWASSAALRTCPPPSA 341
           A P+  S + ++    P    A TS    +  P              S+    T  P  A
Sbjct: 356 ATPTSTSTSAAATTSTPTPTSAATSAESTTEAP-------------TSTPTTDTTTPSEA 402

Query: 342 WRSPWAPTWSSTTPATSTTRCSPTWATAPSPFCTGASTG-TATRPPASTTTPT-STSTS* 515
             +  +P   STT + STT  + T  T  S     +STG T+T  P+ST T T ST+T  
Sbjct: 403 TTATTSP--ESTTVSASTTSATTTAFTTESHTSPDSSTGSTSTAEPSSTFTLTPSTATPS 460

Query: 516 *SRTTTGGTSTTPPHTASAAASAT 587
             + T    ST    T S+    T
Sbjct: 461 TDQFTGSSASTESDSTDSSTVPTT 484

 Score = 32.7 bits (73), Expect = 3.9
 Identities = 17/55 (30%), Positives = 33/55 (59%)
 Frame = +3

Query: 423 APSPFCTGASTGTATRPPASTTTPTSTSTS**SRTTTGGTSTTPPHTASAAASAT 587
           A S +  G++T T T   +S+T+ +  STS  +  ++   +T+PP T+S+  ++T
Sbjct: 14  AVSIYAIGSTTTTETTTSSSSTSGSGQSTSSGTTNSSSSPTTSPPTTSSSPPTST 68

 Score = 32.7 bits (73), Expect = 3.9
 Identities = 33/128 (25%), Positives = 56/128 (42%), Gaps = 1/128 (0%)
 Frame = +3

Query: 168 PSPFSETGSSIRRLPRSMCARTSRYPRSTTP*HPLSPWAWS*PWASSAALRTCPPPSAWR 347
           P+  + +  S    P S     +  P   T     SP + +   ++++A  T     +  
Sbjct: 374 PTSAATSAESTTEAPTSTPTTDTTTPSEATT-ATTSPESTTVSASTTSATTTAFTTESHT 432

Query: 348 SPWAPTWS-STTPATSTTRCSPTWATAPSPFCTGASTGTATRPPASTTTPTSTSTS**SR 524
           SP + T S ST   +ST   +P+ AT  +   TG+S  T +    S+T PT+ + S    
Sbjct: 433 SPDSSTGSTSTAEPSSTFTLTPSTATPSTDQFTGSSASTESDSTDSSTVPTTGTESITES 492

Query: 525 TTTGGTST 548
           ++T   ST
Sbjct: 493 SSTTEAST 500

>gb|AAK61482.1| glycoprotein gp2 [Equine herpesvirus 1]
          Length = 342

 Score = 58.5 bits (140), Expect = 7e-08
 Identities = 50/182 (27%), Positives = 77/182 (41%)
 Frame = +3

Query: 42  APCDASVTLVTRRAYLAEWRRTVKRASLSWPRSCWWRKLQAAPSPFSETGSSIRRLPRSM 221
           AP  AS T     +   E   T   AS + P +       AA +    T +S      + 
Sbjct: 90  APSTASSTTSIPTSTSTETTTTTPTASTTTPTTTTAAPTTAATTTAVTTAASTSAETTTA 149

Query: 222 CARTSRYPRSTTP*HPLSPWAWS*PWASSAALRTCPPPSAWRSPWAPTWSSTTPATSTTR 401
            A  +  P +TTP             +++    T   P+   +    T ++TT A +TT 
Sbjct: 150 TATATSTPTTTTP------------TSTTTTTATTTVPTTASTTTDTTTAATTTAATTTA 197

Query: 402 CSPTWATAPSPFCTGASTGTATRPPASTTTPTSTSTS**SRTTTGGTSTTPPHTASAAAS 581
            + T AT  +   T A+T  AT   A+TT  T+T+ +  + TTT  T+T    TA+  +S
Sbjct: 198 ATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTSS 257

Query: 582 AT 587
           AT
Sbjct: 258 AT 259

 Score = 54.3 bits (129), Expect = 1e-06
 Identities = 48/136 (35%), Positives = 63/136 (46%), Gaps = 10/136 (7%)
 Frame = +3

Query: 210 PRSMCARTSRYPRSTTP*HPLSPWAWS*PWASSAALRTCPPPSAWRSPWAPTWSST---- 377
           P +    TS  P ++T  H  SP + S   +S+AA  +  P +A  +   PT +ST    
Sbjct: 53  PTTSPPTTSSSPPTST--HTSSPSSTSTQSSSTAATSSSAPSTASSTTSIPTSTSTETTT 110

Query: 378 -TPATS-----TTRCSPTWATAPSPFCTGASTGTATRPPASTTTPTSTSTS**SRTTTGG 539
            TP  S     TT  +PT A   +   T AST   T    +T T T T+T+  S TTT  
Sbjct: 111 TTPTASTTTPTTTTAAPTTAATTTAVTTAASTSAETTTATATATSTPTTTTPTSTTTTTA 170

Query: 540 TSTTPPHTASAAASAT 587
           T TT P TAS     T
Sbjct: 171 T-TTVPTTASTTTDTT 185

 Score = 51.2 bits (121), Expect = 1e-05
 Identities = 33/94 (35%), Positives = 49/94 (52%)
 Frame = +3

Query: 300 ASSAALRTCPPPSAWRSPWAPTWSSTTPATSTTRCSPTWATAPSPFCTGASTGTATRPPA 479
           A++ A  T    +   +  A T SS T A +TT  + T AT  +   T A+T  AT   A
Sbjct: 233 ATTTAATTTAATTTAATTTAATTSSATTAATTTAATTTAATTTAATTTAATTTAATTTAA 292

Query: 480 STTTPTSTSTS**SRTTTGGTSTTPPHTASAAAS 581
           +TT  T+T+ +     T+G TSTT   T++ +AS
Sbjct: 293 TTTAATTTAATTTGSPTSGSTSTTGASTSTPSAS 326

 Score = 50.8 bits (120), Expect = 1e-05
 Identities = 38/97 (39%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
 Frame = +3

Query: 300 ASSAALRTCPPPSAWRSPWAPTWSSTTPATSTTRCSPTWATAPSPFCTGASTGTATRPPA 479
           A++ A  T    ++  +  A T ++TT A +TT  + T AT  +   T A+T  AT   A
Sbjct: 243 ATTTAATTTAATTSSATTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAA 302

Query: 480 STT-TPTSTSTS**SRTTTGGTSTTPPHTASAAASAT 587
           +TT +PTS STS     TTG +++TP  +AS A SAT
Sbjct: 303 TTTGSPTSGSTS-----TTGASTSTP--SASTATSAT 332

 Score = 47.4 bits (111), Expect = 2e-04
 Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
 Frame = +3

Query: 303 SSAALRTCPPPSAWRSPWAPTWSSTTPATSTTRCSP--TWATAPSPFCTGASTGTATRPP 476
           +S++  T  PP+   SP   T +S+  +TST   S   T ++APS   +  S  T+T   
Sbjct: 48  NSSSSPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTASSTTSIPTSTSTE 107

Query: 477 ASTTTPTSTSTS**SRTTTGGTSTTPPHTASAAASAT 587
            +TTTPT+++T+    TTT   +T    TA   A++T
Sbjct: 108 TTTTTPTASTTT--PTTTTAAPTTAATTTAVTTAAST 142

 Score = 45.4 bits (106), Expect = 6e-04
 Identities = 29/71 (40%), Positives = 42/71 (58%), Gaps = 1/71 (1%)
 Frame = +3

Query: 303 SSAALRTCPPPSAWRSPWAPTWSSTTPATSTTRCSPTWA-TAPSPFCTGASTGTATRPPA 479
           ++AA  T    +A  +  A T ++TT A +TT  + T + T+ S   TGAST T +   A
Sbjct: 269 TTAATTTAATTTAATTTAATTTAATTTAATTTAATTTGSPTSGSTSTTGASTSTPSASTA 328

Query: 480 STTTPTSTSTS 512
           ++ TPTSTSTS
Sbjct: 329 TSATPTSTSTS 339

 Score = 44.3 bits (103), Expect = 0.001
 Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
 Frame = +3

Query: 300 ASSAALRTCPPPSAWRSPWAPTWSSTTPATSTTRCSPTWATAPSPFCTGAST-GTATRPP 476
           A++AA  T    +A  +  A T ++TT A +TT  + T AT  +   TG+ T G+ +   
Sbjct: 258 ATTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTGSPTSGSTSTTG 317

Query: 477 ASTTTPTSTSTS**SRTTTGGTSTTPPHTASAAAS 581
           AST+TP++++           TS TP  T+++AA+
Sbjct: 318 ASTSTPSAST----------ATSATPTSTSTSAAA 342

 Score = 38.1 bits (87), Expect = 0.092
 Identities = 28/75 (37%), Positives = 42/75 (55%), Gaps = 2/75 (2%)
 Frame = +3

Query: 363 TWSSTTPATSTTRCSPTWATAPSPFCTGASTGTATRPPASTTT--PTSTSTS**SRTTTG 536
           T SS+T  +  +  S T  ++ SP  T +   T++ PP ST T  P+STST     ++T 
Sbjct: 30  TSSSSTSGSGQSTSSGTTNSSSSP--TTSPPTTSSSPPTSTHTSSPSSTST---QSSSTA 84

Query: 537 GTSTTPPHTASAAAS 581
            TS++ P TAS+  S
Sbjct: 85  ATSSSAPSTASSTTS 99

 Score = 37.4 bits (85), Expect = 0.16
 Identities = 31/90 (34%), Positives = 40/90 (44%), Gaps = 22/90 (24%)
 Frame = +3

Query: 372 STTPATSTTRCSPTWATAPSPFCTGASTGTATRPPASTTT-------------------- 491
           ST+  T+ +  SPT  T+P    +   T T T  P+ST+T                    
Sbjct: 41  STSSGTTNSSSSPT--TSPPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTASSTT 98

Query: 492 --PTSTSTS**SRTTTGGTSTTPPHTASAA 575
             PTSTST   + TTT   STT P T +AA
Sbjct: 99  SIPTSTSTE--TTTTTPTASTTTPTTTTAA 126

 Score = 36.6 bits (83), Expect = 0.27
 Identities = 24/72 (33%), Positives = 38/72 (52%)
 Frame = +3

Query: 372 STTPATSTTRCSPTWATAPSPFCTGASTGTATRPPASTTTPTSTSTS**SRTTTGGTSTT 551
           STT   +TT  S T  +  S      S+GT     + TT+P +TS+S  + T T   S+T
Sbjct: 22  STTTTETTTSSSSTSGSGQS-----TSSGTTNSSSSPTTSPPTTSSSPPTSTHTSSPSST 76

Query: 552 PPHTASAAASAT 587
              ++S AA+++
Sbjct: 77  STQSSSTAATSS 88

 Score = 32.7 bits (73), Expect = 3.9
 Identities = 17/55 (30%), Positives = 33/55 (59%)
 Frame = +3

Query: 423 APSPFCTGASTGTATRPPASTTTPTSTSTS**SRTTTGGTSTTPPHTASAAASAT 587
           A S +  G++T T T   +S+T+ +  STS  +  ++   +T+PP T+S+  ++T
Sbjct: 14  AVSIYAIGSTTTTETTTSSSSTSGSGQSTSSGTTNSSSSPTTSPPTTSSSPPTST 68

>pir||A43932 mucin 2 precursor, intestinal - human (fragments)
          Length = 3020

 Score = 58.2 bits (139), Expect = 9e-08
 Identities = 50/144 (34%), Positives = 66/144 (45%), Gaps = 6/144 (4%)
 Frame = +3

Query: 174  PFSETGSSIRRLPRSMCARTSRYPRSTTP*HPLSPWAWS*PWASSAALRTCPPPSAWRSP 353
            P S T       P      T+  P +TTP    SP   + P +      T PPP+   SP
Sbjct: 1550 PTSTTTLPPTTTPSPPPTTTTTPPPTTTP----SPPTTTTP-SPPTITTTTPPPTTTPSP 1604

Query: 354  WAPTWSSTTPATSTTRCSPTWA--TAPSPFCTGASTGTATRPPASTTTPTSTSTS**SRT 527
              PT ++TTP  +TT   PT    T P+   T   T T + PP +TTTP  T+T     T
Sbjct: 1605 --PTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTT 1662

Query: 528  TTGG----TSTTPPHTASAAASAT 587
            TT      T+TTPP T + ++  T
Sbjct: 1663 TTPSPPITTTTTPPPTTTPSSPIT 1686

 Score = 57.0 bits (136), Expect = 2e-07
 Identities = 51/158 (32%), Positives = 67/158 (42%), Gaps = 18/158 (11%)
 Frame = +3

Query: 168  PSPFSETGSSIRRLPRSMCARTSRYPRSTTP*HPLSPWAWS*PWASSAAL---------- 317
            PSP + T S     P      T+  P +TTP  P++      P AS+  L          
Sbjct: 1470 PSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPIT--PPASTTTLPPTTTPSPPT 1527

Query: 318  --RTCPPPSAWRSP------WAPTWSSTTPATSTTRCSPTWATAPSPFCTGASTGTATRP 473
               T PPP+   SP        PT ++T P T+T    PT  T P P  T +   T T  
Sbjct: 1528 TTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPS 1587

Query: 474  PASTTTPTSTSTS**SRTTTGGTSTTPPHTASAAASAT 587
            P + TT T   T+  S  TT  T+TTPP T + +   T
Sbjct: 1588 PPTITTTTPPPTTTPSPPTT--TTTTPPPTTTPSPPTT 1623

 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 50/154 (32%), Positives = 66/154 (42%), Gaps = 16/154 (10%)
 Frame = +3

Query: 174  PFSETGSSIRRLPRSMCARTSRYPRSTTP*HPLSPWAWS*PWASSAALRTCPPPSAWRSP 353
            P + T S     P +    T+  P +TTP  P +      P        T P P    +P
Sbjct: 1613 PPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPP-------TTTPSPPTTTTP 1665

Query: 354  WAPTWSSTTPATSTTRCSP---------TWATAPSPFCTGASTGTATRPPASTTTPT--S 500
              P  ++TTP  +TT  SP         T  T PSP  T +S  T T  P+STTTP+   
Sbjct: 1666 SPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPP 1725

Query: 501  TSTS**SRTTTGGTSTT-----PPHTASAAASAT 587
            T+ +  S TTT    TT     PP T S+  + T
Sbjct: 1726 TTMTTPSPTTTPSPPTTTMTTLPPTTTSSPLTTT 1759

 Score = 52.4 bits (124), Expect = 5e-06
 Identities = 46/157 (29%), Positives = 64/157 (40%), Gaps = 1/157 (0%)
 Frame = +3

Query: 114  RASLSWPRSCWWRKLQAAPSPFSETGSSIRRLPRSMCARTSRYPRSTTP*HPLSPWAWS* 293
            R +  WP      K    PSP + T       P      T+  P +TTP  P +      
Sbjct: 1385 RVNCCWPMD----KCITTPSPPTTT-------PSPPPTTTTTLPPTTTPSPPTTT----- 1428

Query: 294  PWASSAALRTCPPPSAWRSPWAPTWSSTTPATSTTRCSP-TWATAPSPFCTGASTGTATR 470
                     T PPP+   SP  P  ++TTP  +TT   P +  T P P  T +   T   
Sbjct: 1429 --------TTTPPPTTTPSP--PITTTTTPLPTTTPSPPISTTTTPPPTTTPSPPTTTPS 1478

Query: 471  PPASTTTPTSTSTS**SRTTTGGTSTTPPHTASAAAS 581
            PP +T +P +T+T+    TTT     T P T  A+ +
Sbjct: 1479 PPTTTPSPPTTTTTTPPPTTTPSPPMTTPITPPASTT 1515

 Score = 50.8 bits (120), Expect = 1e-05
 Identities = 41/142 (28%), Positives = 61/142 (42%), Gaps = 2/142 (1%)
 Frame = +3

Query: 168  PSPFSETGSSIRRLPRSMCARTSRYPRSTTP*HPLSPWAWS*PWASSAALRTCP--PPSA 341
            P P +         P      T+  P +TTP  P +      P  + +   T P  PP++
Sbjct: 1572 PPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTS 1631

Query: 342  WRSPWAPTWSSTTPATSTTRCSPTWATAPSPFCTGASTGTATRPPASTTTPTSTSTS**S 521
              +   PT + + P T+TT   PT   +P    T +   T T  P  TTTP+S  T+  S
Sbjct: 1632 -TTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPS 1690

Query: 522  RTTTGGTSTTPPHTASAAASAT 587
              TT  T+ +P  T S+  + T
Sbjct: 1691 PPTTTMTTPSPTTTPSSPITTT 1712

 Score = 48.9 bits (115), Expect = 5e-05
 Identities = 44/120 (36%), Positives = 57/120 (46%), Gaps = 7/120 (5%)
 Frame = +3

Query: 249  STTP*HPLSPWAWS*PWASSAALRTCP-PPSAWRSPWAPTWSSTTPATSTTRCSP--TWA 419
            +TTP  P+S      P  + +   T P PP+   SP  PT ++TTP  +TT   P  T  
Sbjct: 1451 TTTPSPPISTTTTPPPTTTPSPPTTTPSPPTTTPSP--PTTTTTTPPPTTTPSPPMTTPI 1508

Query: 420  TAPSPFCTGASTGTATRPPASTTTPTSTSTS**SRTT--TGGTSTT--PPHTASAAASAT 587
            T P+   T   T T + P  +TTTP  T+T     TT  T  TSTT  PP T  +    T
Sbjct: 1509 TPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTT 1568

 Score = 45.4 bits (106), Expect = 6e-04
 Identities = 38/109 (34%), Positives = 54/109 (48%), Gaps = 4/109 (3%)
 Frame = +3

Query: 243  PRSTTP*HPLSPWAWS*PWAS-SAALRTCP-PPSAWRSPWAPTWSSTTPATSTTRCSPTW 416
            P +TTP  P++      P  + S+ + T P PP+   +  +PT + ++P T+TT  S T 
Sbjct: 1660 PTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTT 1719

Query: 417  ATAPSPFC-TGASTGTATRPPAST-TTPTSTSTS**SRTTTGGTSTTPP 557
              +P P   T  S  T   PP +T TT   T+TS    TT    S TPP
Sbjct: 1720 TPSPPPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSPLTTTPLPPSITPP 1768

 Score = 44.7 bits (104), Expect = 0.001
 Identities = 39/119 (32%), Positives = 51/119 (42%), Gaps = 22/119 (18%)
 Frame = +3

Query: 297  WASSAALRTCPPPSAWRSP-------WAPTWSSTTPATSTTRCSPTWATAPSPFCTGAST 455
            W     + T  PP+   SP         PT + + P T+TT   PT  T PSP  T  +T
Sbjct: 1390 WPMDKCITTPSPPTTTPSPPPTTTTTLPPTTTPSPPTTTTTTPPPT--TTPSPPITTTTT 1447

Query: 456  -----------GTATRPPASTTTPTSTSTS**SRTTTGG----TSTTPPHTASAAASAT 587
                        T T PP  TTTP+  +T+    TTT      T+TTPP T + +   T
Sbjct: 1448 PLPTTTPSPPISTTTTPP-PTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMT 1505

 Score = 44.7 bits (104), Expect = 0.001
 Identities = 36/109 (33%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
 Frame = +3

Query: 231  TSRYPRSTTP*HPLSPWAWS*PWAS-SAALRTCPPPSAWRSPWAPTWSSTTPATSTTRCS 407
            T   P +TTP  P +      P  + S+ + T   PS+  +P  P  + TTP+ +TT   
Sbjct: 1680 TPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTPSP 1739

Query: 408  PTWATAPSPFCTGASTGTATRPPASTTTPTSTSTS**SRTTTGGTSTTP 554
            PT      P  T +S  T T  P S T PT +  S    TTT  T   P
Sbjct: 1740 PTTTMTTLPPTTTSSPLTTTPLPPSITPPTFSPFS----TTTPTTPCVP 1784

 Score = 41.6 bits (96), Expect = 0.008
 Identities = 32/87 (36%), Positives = 45/87 (50%), Gaps = 1/87 (1%)
 Frame = +3

Query: 294  PWASSAALRTCPPPSAWRSPWAPTWSSTTPATSTTRCSPTWATAPSPFCTGASTGTATRP 473
            P +++  +   P P+  ++P      +TTP T+TT  +PT    P+P  TG  T T    
Sbjct: 1926 PISTTTTVTPTPTPTGTQTP------TTTPITTTTTVTPT----PTP--TGTQTPTTVLI 1973

Query: 474  PASTT-TPTSTSTS**SRTTTGGTSTT 551
              +TT TPT T TS  S T T  T+TT
Sbjct: 1974 TTTTTMTPTPTPTSTKSTTVTPITTTT 2000

 Score = 37.0 bits (84), Expect = 0.21
 Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
 Frame = +3

Query: 294  PWASSAALRTCPPPSAWRSPWAPTWSSTTPATSTTRCSPT-----WATAPSPFCTGASTG 458
            P  ++  +   P P++ +SP      + TP ++TT  +PT       T  +   T  +T 
Sbjct: 1897 PITTTTTVTPTPTPTSTQSPNGLQAPTPTPISTTTTVTPTPTPTGTQTPTTTPITTTTTV 1956

Query: 459  TATRPPASTTTPTSTSTS**SRTTTGGTSTTPPHTASAAASAT 587
            T T  P  T TPT+        TTT   + TP  T++ + + T
Sbjct: 1957 TPTPTPTGTQTPTTVLI-----TTTTTMTPTPTPTSTKSTTVT 1994

 Score = 36.2 bits (82), Expect = 0.35
 Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
 Frame = +3

Query: 333  PSAWRSPWAPTWSSTT------PATS-TTRCSPTWATAPSPFCTGASTGTATRPPASTTT 491
            P   RS  +P   STT      PA   T+   P+  TAP+   T +   T + PP++TT+
Sbjct: 2062 PQTSRSTSSPLTESTTLLSTLPPAIEMTSTAPPSTPTAPT---TTSGGHTLSPPPSTTTS 2118

Query: 492  PTSTSTS**SRTTTGGTSTTP-PHTASAAASA 584
            P  T T    R TT G+S+ P P T     ++
Sbjct: 2119 PPGTPT----RGTTTGSSSAPTPSTVQTTTTS 2146

 Score = 36.2 bits (82), Expect = 0.35
 Identities = 37/143 (25%), Positives = 62/143 (42%), Gaps = 3/143 (2%)
 Frame = +3

Query: 168  PSPFSETGSSIRRLPRSMCARTSRYPRST-TP*H-PLSPWAWS*PWASSAALRTCPPPSA 341
            P+P S   +++  +  +     +  P  T TP   P+S      P  +     T PP   
Sbjct: 1983 PTPTSTKSTTVTPITTTTTVTATPTPTGTQTPTMIPISTTTTVTPTPTPTTGSTGPPTHT 2042

Query: 342  WRSPWAPTWSSTTPATSTTRCSPTWATAPSPFCTGASTGTATRPPASTTTPTSTSTS**S 521
              +P A   +S  P  S+T   P  + + S   T ++T  +T PPA   T T+  ++  +
Sbjct: 2043 STAPIAELTTSNPPPESST---PQTSRSTSSPLTESTTLLSTLPPAIEMTSTAPPSTPTA 2099

Query: 522  RTTTGGTST-TPPHTASAAASAT 587
             TTT G  T +PP + + +   T
Sbjct: 2100 PTTTSGGHTLSPPPSTTTSPPGT 2122

 Score = 35.0 bits (79), Expect = 0.78
 Identities = 27/63 (42%), Positives = 33/63 (51%), Gaps = 5/63 (7%)
 Frame = +3

Query: 378  TPATSTTRCSPTWATAPSPFCTGASTG--TATRPPASTT---TPTSTSTS**SRTTTGGT 542
            TP T+TT  +PT    P+P  T +  G    T  P STT   TPT T T   + TTT  T
Sbjct: 1896 TPITTTTTVTPT----PTPTSTQSPNGLQAPTPTPISTTTTVTPTPTPTGTQTPTTTPIT 1951

Query: 543  STT 551
            +TT
Sbjct: 1952 TTT 1954

 Score = 35.0 bits (79), Expect = 0.78
 Identities = 33/112 (29%), Positives = 47/112 (41%), Gaps = 8/112 (7%)
 Frame = +3

Query: 132  PRSCWWRKLQAAPSPFSETGSSIRRLPRSMCARTSRYPRSTTP*HPLSPWAWS*PWASSA 311
            P S   +  ++  SP +E+ + +  LP ++   TS  P ST       P A   P  +S 
Sbjct: 2057 PESSTPQTSRSTSSPLTESTTLLSTLPPAI-EMTSTAPPST-------PTA---PTTTSG 2105

Query: 312  ALRTCPPPSAWRSP-WAPTWSSTT-------PATSTTRCSPTWATAPSPFCT 443
                 PPPS   SP   PT  +TT       P+T  T  +  W   P+P  T
Sbjct: 2106 GHTLSPPPSTTTSPPGTPTRGTTTGSSSAPTPSTVQTTTTSAWTPTPTPLST 2157

 Score = 33.5 bits (75), Expect = 2.3
 Identities = 36/125 (28%), Positives = 57/125 (44%), Gaps = 10/125 (8%)
 Frame = +3

Query: 168  PSPFSETGSS-----IRRLPRSMCARTSRYPRSTTP*HPLSPWAWS*PWASSAALRTCPP 332
            P+P   TGS+         P +    ++  P S+TP    S    S P   S  L +  P
Sbjct: 2027 PTPTPTTGSTGPPTHTSTAPIAELTTSNPPPESSTPQTSRST---SSPLTESTTLLSTLP 2083

Query: 333  PSAWRSPWAPTWSSTTPATSTT--RCSPTWATAPSPFCT---GASTGTATRPPASTTTPT 497
            P+   +  AP  + T P T++     SP  +T  SP  T   G +TG+++ P  ST   T
Sbjct: 2084 PAIEMTSTAPPSTPTAPTTTSGGHTLSPPPSTTTSPPGTPTRGTTTGSSSAPTPSTV-QT 2142

Query: 498  STSTS 512
            +T+++
Sbjct: 2143 TTTSA 2147

>gb|AAA59163.1| mucin
          Length = 1270

 Score = 58.2 bits (139), Expect = 9e-08
 Identities = 50/144 (34%), Positives = 66/144 (45%), Gaps = 6/144 (4%)
 Frame = +3

Query: 174  PFSETGSSIRRLPRSMCARTSRYPRSTTP*HPLSPWAWS*PWASSAALRTCPPPSAWRSP 353
            P S T       P      T+  P +TTP    SP   + P +      T PPP+   SP
Sbjct: 925  PTSTTTLPPTTTPSPPPTTTTTPPPTTTP----SPPTTTTP-SPPTITTTTPPPTTTPSP 979

Query: 354  WAPTWSSTTPATSTTRCSPTWA--TAPSPFCTGASTGTATRPPASTTTPTSTSTS**SRT 527
              PT ++TTP  +TT   PT    T P+   T   T T + PP +TTTP  T+T     T
Sbjct: 980  --PTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTT 1037

Query: 528  TTGG----TSTTPPHTASAAASAT 587
            TT      T+TTPP T + ++  T
Sbjct: 1038 TTPSPPITTTTTPPPTTTPSSPIT 1061

 Score = 57.0 bits (136), Expect = 2e-07
 Identities = 51/158 (32%), Positives = 67/158 (42%), Gaps = 18/158 (11%)
 Frame = +3

Query: 168  PSPFSETGSSIRRLPRSMCARTSRYPRSTTP*HPLSPWAWS*PWASSAAL---------- 317
            PSP + T S     P      T+  P +TTP  P++      P AS+  L          
Sbjct: 845  PSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPIT--PPASTTTLPPTTTPSPPT 902

Query: 318  --RTCPPPSAWRSP------WAPTWSSTTPATSTTRCSPTWATAPSPFCTGASTGTATRP 473
               T PPP+   SP        PT ++T P T+T    PT  T P P  T +   T T  
Sbjct: 903  TTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPS 962

Query: 474  PASTTTPTSTSTS**SRTTTGGTSTTPPHTASAAASAT 587
            P + TT T   T+  S  TT  T+TTPP T + +   T
Sbjct: 963  PPTITTTTPPPTTTPSPPTT--TTTTPPPTTTPSPPTT 998

 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 50/154 (32%), Positives = 66/154 (42%), Gaps = 16/154 (10%)
 Frame = +3

Query: 174  PFSETGSSIRRLPRSMCARTSRYPRSTTP*HPLSPWAWS*PWASSAALRTCPPPSAWRSP 353
            P + T S     P +    T+  P +TTP  P +      P        T P P    +P
Sbjct: 988  PPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPP-------TTTPSPPTTTTP 1040

Query: 354  WAPTWSSTTPATSTTRCSP---------TWATAPSPFCTGASTGTATRPPASTTTPT--S 500
              P  ++TTP  +TT  SP         T  T PSP  T +S  T T  P+STTTP+   
Sbjct: 1041 SPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPP 1100

Query: 501  TSTS**SRTTTGGTSTT-----PPHTASAAASAT 587
            T+ +  S TTT    TT     PP T S+  + T
Sbjct: 1101 TTMTTPSPTTTPSPPTTTMTTLPPTTTSSPLTTT 1134

 Score = 52.4 bits (124), Expect = 5e-06
 Identities = 46/157 (29%), Positives = 64/157 (40%), Gaps = 1/157 (0%)
 Frame = +3

Query: 114  RASLSWPRSCWWRKLQAAPSPFSETGSSIRRLPRSMCARTSRYPRSTTP*HPLSPWAWS* 293
            R +  WP      K    PSP + T       P      T+  P +TTP  P +      
Sbjct: 760  RVNCCWPMD----KCITTPSPPTTT-------PSPPPTTTTTLPPTTTPSPPTTT----- 803

Query: 294  PWASSAALRTCPPPSAWRSPWAPTWSSTTPATSTTRCSP-TWATAPSPFCTGASTGTATR 470
                     T PPP+   SP  P  ++TTP  +TT   P +  T P P  T +   T   
Sbjct: 804  --------TTTPPPTTTPSP--PITTTTTPLPTTTPSPPISTTTTPPPTTTPSPPTTTPS 853

Query: 471  PPASTTTPTSTSTS**SRTTTGGTSTTPPHTASAAAS 581
            PP +T +P +T+T+    TTT     T P T  A+ +
Sbjct: 854  PPTTTPSPPTTTTTTPPPTTTPSPPMTTPITPPASTT 890

 Score = 50.8 bits (120), Expect = 1e-05
 Identities = 41/142 (28%), Positives = 61/142 (42%), Gaps = 2/142 (1%)
 Frame = +3

Query: 168  PSPFSETGSSIRRLPRSMCARTSRYPRSTTP*HPLSPWAWS*PWASSAALRTCP--PPSA 341
            P P +         P      T+  P +TTP  P +      P  + +   T P  PP++
Sbjct: 947  PPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTS 1006

Query: 342  WRSPWAPTWSSTTPATSTTRCSPTWATAPSPFCTGASTGTATRPPASTTTPTSTSTS**S 521
              +   PT + + P T+TT   PT   +P    T +   T T  P  TTTP+S  T+  S
Sbjct: 1007 -TTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPS 1065

Query: 522  RTTTGGTSTTPPHTASAAASAT 587
              TT  T+ +P  T S+  + T
Sbjct: 1066 PPTTTMTTPSPTTTPSSPITTT 1087

 Score = 48.9 bits (115), Expect = 5e-05
 Identities = 44/120 (36%), Positives = 57/120 (46%), Gaps = 7/120 (5%)
 Frame = +3

Query: 249  STTP*HPLSPWAWS*PWASSAALRTCP-PPSAWRSPWAPTWSSTTPATSTTRCSP--TWA 419
            +TTP  P+S      P  + +   T P PP+   SP  PT ++TTP  +TT   P  T  
Sbjct: 826  TTTPSPPISTTTTPPPTTTPSPPTTTPSPPTTTPSP--PTTTTTTPPPTTTPSPPMTTPI 883

Query: 420  TAPSPFCTGASTGTATRPPASTTTPTSTSTS**SRTT--TGGTSTT--PPHTASAAASAT 587
            T P+   T   T T + P  +TTTP  T+T     TT  T  TSTT  PP T  +    T
Sbjct: 884  TPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTT 943

 Score = 45.4 bits (106), Expect = 6e-04
 Identities = 38/109 (34%), Positives = 54/109 (48%), Gaps = 4/109 (3%)
 Frame = +3

Query: 243  PRSTTP*HPLSPWAWS*PWAS-SAALRTCP-PPSAWRSPWAPTWSSTTPATSTTRCSPTW 416
            P +TTP  P++      P  + S+ + T P PP+   +  +PT + ++P T+TT  S T 
Sbjct: 1035 PTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTT 1094

Query: 417  ATAPSPFC-TGASTGTATRPPAST-TTPTSTSTS**SRTTTGGTSTTPP 557
              +P P   T  S  T   PP +T TT   T+TS    TT    S TPP
Sbjct: 1095 TPSPPPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSPLTTTPLPPSITPP 1143

 Score = 44.7 bits (104), Expect = 0.001
 Identities = 36/109 (33%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
 Frame = +3

Query: 231  TSRYPRSTTP*HPLSPWAWS*PWAS-SAALRTCPPPSAWRSPWAPTWSSTTPATSTTRCS 407
            T   P +TTP  P +      P  + S+ + T   PS+  +P  P  + TTP+ +TT   
Sbjct: 1055 TPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTPSP 1114

Query: 408  PTWATAPSPFCTGASTGTATRPPASTTTPTSTSTS**SRTTTGGTSTTP 554
            PT      P  T +S  T T  P S T PT +  S    TTT  T   P
Sbjct: 1115 PTTTMTTLPPTTTSSPLTTTPLPPSITPPTFSPFS----TTTPTTPCVP 1159

 Score = 44.7 bits (104), Expect = 0.001
 Identities = 39/119 (32%), Positives = 51/119 (42%), Gaps = 22/119 (18%)
 Frame = +3

Query: 297  WASSAALRTCPPPSAWRSP-------WAPTWSSTTPATSTTRCSPTWATAPSPFCTGAST 455
            W     + T  PP+   SP         PT + + P T+TT   PT  T PSP  T  +T
Sbjct: 765  WPMDKCITTPSPPTTTPSPPPTTTTTLPPTTTPSPPTTTTTTPPPT--TTPSPPITTTTT 822

Query: 456  -----------GTATRPPASTTTPTSTSTS**SRTTTGG----TSTTPPHTASAAASAT 587
                        T T PP  TTTP+  +T+    TTT      T+TTPP T + +   T
Sbjct: 823  PLPTTTPSPPISTTTTPP-PTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMT 880



EST assemble image


clone accession position
1 HC035d09_r AV634599 1 460
2 MX209a08_r BP089520 1 301
3 HCL091h03_r AV644661 53 587




Chlamydomonas reinhardtii
Kazusa DNA Research Institute