Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001947A_C01 KCC001947A_c01
(541 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_421082.1| conserved hypothetical protein [Caulobacter cre... 100 2e-20
ref|ZP_00006518.1| COG1956: GAF domain-containing protein [Rhodo... 95 5e-19
ref|NP_834359.1| GAF domain-containing proteins [Bacillus cereus... 79 4e-14
ref|NP_658686.1| GAF, Domain present in phytochromes and cGMP-sp... 79 4e-14
ref|NP_274882.1| conserved hypothetical protein [Neisseria menin... 74 9e-13
>ref|NP_421082.1| conserved hypothetical protein [Caulobacter crescentus CB15]
gi|25399782|pir||F87531 conserved hypothetical protein
CC2279 [imported] - Caulobacter crescentus
gi|13423794|gb|AAK24250.1| conserved hypothetical
protein [Caulobacter crescentus CB15]
Length = 231
Score = 99.8 bits (247), Expect = 2e-20
Identities = 48/93 (51%), Positives = 62/93 (66%)
Frame = +2
Query: 263 EREARYELVLESVKSVLEGEDDWVAVMATVACLLHEAFEYYHWTGFYQAGPPGDDTLVIG 442
++ RY V + + SVL+GE + A MATVA +L +F+ Y W GFY P + LV+G
Sbjct: 80 DKATRYAEVADEIASVLDGEPNLTARMATVASMLANSFDSYFWAGFYVVDPTKERELVVG 139
Query: 443 PYQCHMGCLRIPYSRGVCGAAARTKTSQLVPDV 541
PYQ +GCLRI + RGVCGAAA T +QLVPDV
Sbjct: 140 PYQGTLGCLRIAFGRGVCGAAAATGQTQLVPDV 172
>ref|ZP_00006518.1| COG1956: GAF domain-containing protein [Rhodobacter sphaeroides]
Length = 150
Score = 95.1 bits (235), Expect = 5e-19
Identities = 48/88 (54%), Positives = 61/88 (68%)
Frame = +2
Query: 278 YELVLESVKSVLEGEDDWVAVMATVACLLHEAFEYYHWTGFYQAGPPGDDTLVIGPYQCH 457
Y+ + ++++++ GE D VA+MATVAC +H A WTGFY+ G + L IGPYQ
Sbjct: 3 YDQLDQTIEALCHGEQDTVALMATVACEIHHAHPLSDWTGFYRV--TGPELLKIGPYQGA 60
Query: 458 MGCLRIPYSRGVCGAAARTKTSQLVPDV 541
GCL IP+SRGVCGAAART QLVPDV
Sbjct: 61 HGCLVIPFSRGVCGAAARTGRIQLVPDV 88
>ref|NP_834359.1| GAF domain-containing proteins [Bacillus cereus ATCC 14579]
gi|29898287|gb|AAP11560.1| GAF domain-containing
proteins [Bacillus cereus ATCC 14579]
Length = 159
Score = 79.0 bits (193), Expect = 4e-14
Identities = 39/92 (42%), Positives = 59/92 (63%)
Frame = +2
Query: 266 REARYELVLESVKSVLEGEDDWVAVMATVACLLHEAFEYYHWTGFYQAGPPGDDTLVIGP 445
R +YE V++ + ++L GE + VA ++ + LL++ + +W GFY + LV+GP
Sbjct: 11 RVQQYETVIKQLDALLTGESNVVANLSNASALLNQFLDRVNWVGFYVTE---GNQLVLGP 67
Query: 446 YQCHMGCLRIPYSRGVCGAAARTKTSQLVPDV 541
+Q C+RIP+ RGVCG AA TKT+QLV DV
Sbjct: 68 FQGMPACVRIPFGRGVCGVAAETKTTQLVADV 99
>ref|NP_658686.1| GAF, Domain present in phytochromes and cGMP-specific
phosphodiesterases [Bacillus anthracis A2012]
gi|30264726|ref|NP_847103.1| conserved hypothetical
protein [Bacillus anthracis str. Ames]
gi|30259401|gb|AAP28589.1| conserved hypothetical
protein [Bacillus anthracis str. Ames]
Length = 159
Score = 79.0 bits (193), Expect = 4e-14
Identities = 39/92 (42%), Positives = 59/92 (63%)
Frame = +2
Query: 266 REARYELVLESVKSVLEGEDDWVAVMATVACLLHEAFEYYHWTGFYQAGPPGDDTLVIGP 445
R +YE V++ + ++L GE + VA ++ + LL++ + +W GFY + LV+GP
Sbjct: 11 RVQQYETVIKQLDALLTGESNIVANLSNASALLNQFLDRVNWVGFYVTE---GNQLVLGP 67
Query: 446 YQCHMGCLRIPYSRGVCGAAARTKTSQLVPDV 541
+Q C+RIP+ RGVCG AA TKT+QLV DV
Sbjct: 68 FQGMPACVRIPFGRGVCGVAAETKTTQLVADV 99
>ref|NP_274882.1| conserved hypothetical protein [Neisseria meningitidis MC58]
gi|11279818|pir||D81031 conserved hypothetical protein
NMB1886 [imported] - Neisseria meningitidis (strain MC58
serogroup B) gi|7227145|gb|AAF42220.1| conserved
hypothetical protein [Neisseria meningitidis MC58]
Length = 167
Score = 74.3 bits (181), Expect = 9e-13
Identities = 40/96 (41%), Positives = 56/96 (57%)
Frame = +2
Query: 254 SNEEREARYELVLESVKSVLEGEDDWVAVMATVACLLHEAFEYYHWTGFYQAGPPGDDTL 433
S ++ A Y VL ++SV+ E DWVA +A A +L EAF ++ W GFY D+ L
Sbjct: 7 SASDKAALYREVLPQIESVVADEADWVANLANTAAVLKEAFGWF-WVGFYLVDTRSDE-L 64
Query: 434 VIGPYQCHMGCLRIPYSRGVCGAAARTKTSQLVPDV 541
V+ P+Q + C RIP+ RGVCG A + +V DV
Sbjct: 65 VLAPFQGPLACTRIPFGRGVCGQAWAKGETVVVKDV 100
