KCC001941A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001941A_C01 KCC001941A_c01
AGCTTTTCTTGCACTCGCAGCTTTGATAAGGCGAAGTGATTTTCCCACTTGTTACTGGCA
TCAACTTTGTTACCCGCTTAGCTTGCTTACGAGGAGCCTCTGTGCGTAATGATTCTCCAA
TCAGCAGTTCAGCGGATGGTGCGCTGCTGTAATGGGCGCGCTGTGGCTAGGTTACAGCTA
GCAGCGTGCTGCCCCGCGCCTCACCGCCGGCGGCTCAGCGTATCCGCAGCTGCCGCTGCT
GCTGCCGCGCCTGCGGCCGCTGCTGCGGTTGCTGCTGCTGCGGTGGCAGGCGGCAGCGCC
CCAGCGGTGTTCGGCGTGCCCGCGGCGGACATCTTCTCCGCCTCCTCGGCGGTACTGGTA
CCCGTGTATGCGCTCATGGCA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001941A_C01 KCC001941A_c01
         (381 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|XP_346988.1| protein tyrosine phosphatase, receptor type, F ...    44  7e-04
gb|AAO38468.1| putative transcription activator [Oryza sativa (j...    42  0.002
ref|NP_611958.1| CG18510-PA [Drosophila melanogaster] gi|2164507...    42  0.002
gb|AAN03677.1|AF411696_1 Siah [Danio rerio]                            42  0.002
ref|ZP_00089403.1| COG0811: Biopolymer transport proteins [Azoto...    42  0.003

>ref|XP_346988.1| protein tyrosine phosphatase, receptor type, F [Rattus norvegicus]
          Length = 197

 Score = 43.5 bits (101), Expect = 7e-04
 Identities = 34/74 (45%), Positives = 39/74 (51%)
 Frame = -2

Query: 380 AMSAYTGTSTAEEAEKMSAAGTPNTAGALPPATAAAATAAAAAGAAAAAAAADTLSRRR* 201
           A +A    +TA  A   +AAG   TA A   A  AAATA AAAGAAAAAAAA   +    
Sbjct: 64  AAAAAGAAATAGAAAAAAAAGAAATAAA---AAGAAATAEAAAGAAAAAAAAAGAAEASE 120

Query: 200 GAGQHAASCNLATA 159
            A   AA+   A A
Sbjct: 121 AAAGAAAAAAAAAA 134

 Score = 43.5 bits (101), Expect = 7e-04
 Identities = 33/74 (44%), Positives = 38/74 (50%)
 Frame = -2

Query: 380 AMSAYTGTSTAEEAEKMSAAGTPNTAGALPPATAAAATAAAAAGAAAAAAAADTLSRRR* 201
           A +A  G + A EA    AAG    A A   A  A ATAAAAAGAA+AAAAA   +    
Sbjct: 108 AAAAAAGAAEASEA----AAGAAAAAAAAAAAAGATATAAAAAGAASAAAAAAGAAEAPA 163

Query: 200 GAGQHAASCNLATA 159
            A   AA+   A A
Sbjct: 164 AAAGAAAAAAAAAA 177

 Score = 43.1 bits (100), Expect = 0.001
 Identities = 34/72 (47%), Positives = 39/72 (53%)
 Frame = -2

Query: 374 SAYTGTSTAEEAEKMSAAGTPNTAGALPPATAAAATAAAAAGAAAAAAAADTLSRRR*GA 195
           +A  GT+ A  A   +AA     A A   AT AAAT AAAAGAAAAAAAA T +     A
Sbjct: 15  AAPAGTAAAAAAAAAAAA-----AAAAAAATGAAATTAAAAGAAAAAAAATTAAAA--AA 67

Query: 194 GQHAASCNLATA 159
              AA+   A A
Sbjct: 68  AGAAATAGAAAA 79

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 27/54 (50%), Positives = 31/54 (57%)
 Frame = -2

Query: 380 AMSAYTGTSTAEEAEKMSAAGTPNTAGALPPATAAAATAAAAAGAAAAAAAADT 219
           A +A   T+TA  A   ++A       A  PA AA A AAAAA AAAAAAAA T
Sbjct: 132 AAAAAGATATAAAAAGAASAAAAAAGAAEAPAAAAGAAAAAAAAAAAAAAAAAT 185

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 29/72 (40%), Positives = 35/72 (48%)
 Frame = -2

Query: 374 SAYTGTSTAEEAEKMSAAGTPNTAGALPPATAAAATAAAAAGAAAAAAAADTLSRRR*GA 195
           +A  G +   EA   +AA     AGA   + AAA  AAAAA AAAAA A  T +     A
Sbjct: 90  AAAAGAAATAEAAAGAAAAAAAAAGAAEASEAAAGAAAAAAAAAAAAGATATAAAAAGAA 149

Query: 194 GQHAASCNLATA 159
              AA+   A A
Sbjct: 150 SAAAAAAGAAEA 161

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 27/60 (45%), Positives = 34/60 (56%)
 Frame = +1

Query: 172 LQLAACCPAPHRRRLSVSAAAAAAAAPAAAAAVAAAAVAGGSAPAVFGVPAADIFSASSA 351
           +Q AA   AP     + +AAAAAAAA AAAAA  AAA    +A A     AA   +A++A
Sbjct: 8   VQAAAGAAAPAGTAAAAAAAAAAAAAAAAAAATGAAATTAAAAGAAAAAAAATTAAAAAA 67

 Score = 40.8 bits (94), Expect = 0.005
 Identities = 30/69 (43%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
 Frame = -2

Query: 380 AMSAYTGTSTAEEAEKMSAAGTPNTAGALPPATAAAAT-AAAAAGAAAAAAAADTLSRRR 204
           A +A    +T   A   +AAG    A A   A AAAA  AAA AGAAAAAAAA   +   
Sbjct: 31  AAAAAAAAATGAAATTAAAAGAAAAAAAATTAAAAAAAGAAATAGAAAAAAAAGAAATAA 90

Query: 203 *GAGQHAAS 177
             AG  A +
Sbjct: 91  AAAGAAATA 99

 Score = 40.8 bits (94), Expect = 0.005
 Identities = 30/72 (41%), Positives = 34/72 (46%)
 Frame = -2

Query: 374 SAYTGTSTAEEAEKMSAAGTPNTAGALPPATAAAATAAAAAGAAAAAAAADTLSRRR*GA 195
           +A  G + A  A   +AA     A A   A AAAA A AAA AAAAA AA T       A
Sbjct: 47  AAAAGAAAAAAAATTAAAAAAAGAAATAGAAAAAAAAGAAATAAAAAGAAATAEAAAGAA 106

Query: 194 GQHAASCNLATA 159
              AA+   A A
Sbjct: 107 AAAAAAAGAAEA 118

 Score = 40.8 bits (94), Expect = 0.005
 Identities = 28/57 (49%), Positives = 31/57 (54%)
 Frame = -2

Query: 329 SAAGTPNTAGALPPATAAAATAAAAAGAAAAAAAADTLSRRR*GAGQHAASCNLATA 159
           +AAG    AG    A AAAA AAAAA AAA  AAA T +    GA   AA+   A A
Sbjct: 10  AAAGAAAPAGTAAAAAAAAAAAAAAAAAAATGAAATTAAAA--GAAAAAAAATTAAA 64

 Score = 39.7 bits (91), Expect = 0.010
 Identities = 29/74 (39%), Positives = 33/74 (44%)
 Frame = -2

Query: 380 AMSAYTGTSTAEEAEKMSAAGTPNTAGALPPATAAAATAAAAAGAAAAAAAADTLSRRR* 201
           A +A    + A  A    AA T   A     A AAA TAAAAA A AAA A    +    
Sbjct: 24  AAAAAAAAAAAAAAAATGAAATTAAAAGAAAAAAAATTAAAAAAAGAAATAGAAAAAAAA 83

Query: 200 GAGQHAASCNLATA 159
           GA   AA+   A A
Sbjct: 84  GAAATAAAAAGAAA 97

 Score = 39.7 bits (91), Expect = 0.010
 Identities = 28/68 (41%), Positives = 31/68 (45%)
 Frame = -2

Query: 380 AMSAYTGTSTAEEAEKMSAAGTPNTAGALPPATAAAATAAAAAGAAAAAAAADTLSRRR* 201
           A +A    +TA  A    AA T   A A   A AAA  AAAA  AA A AAA   +    
Sbjct: 52  AAAAAAAATTAAAAAAAGAAATAGAAAAAAAAGAAATAAAAAGAAATAEAAAGAAAAAAA 111

Query: 200 GAGQHAAS 177
            AG   AS
Sbjct: 112 AAGAAEAS 119

 Score = 39.3 bits (90), Expect = 0.014
 Identities = 27/60 (45%), Positives = 32/60 (53%)
 Frame = +1

Query: 172 LQLAACCPAPHRRRLSVSAAAAAAAAPAAAAAVAAAAVAGGSAPAVFGVPAADIFSASSA 351
           LQLA    A        +AAAAAAAA AAAAA AAA  A  +  A  G  AA   + ++A
Sbjct: 4   LQLAVQAAAGAAAPAGTAAAAAAAAAAAAAAAAAAATGAAATTAAAAGAAAAAAAATTAA 63

 Score = 38.9 bits (89), Expect = 0.018
 Identities = 31/75 (41%), Positives = 36/75 (47%), Gaps = 1/75 (1%)
 Frame = -2

Query: 380 AMSAYTGTS-TAEEAEKMSAAGTPNTAGALPPATAAAATAAAAAGAAAAAAAADTLSRRR 204
           A +A TG + T   A   +AA    T  A   A  AAATA AAA AAAA AAA   +   
Sbjct: 35  AAAAATGAAATTAAAAGAAAAAAAATTAAAAAAAGAAATAGAAAAAAAAGAAATAAAAAG 94

Query: 203 *GAGQHAASCNLATA 159
             A   AA+   A A
Sbjct: 95  AAATAEAAAGAAAAA 109

 Score = 38.9 bits (89), Expect = 0.018
 Identities = 28/71 (39%), Positives = 33/71 (46%)
 Frame = -2

Query: 371 AYTGTSTAEEAEKMSAAGTPNTAGALPPATAAAATAAAAAGAAAAAAAADTLSRRR*GAG 192
           A  G + A  A   +A  +   AGA   A AAAA A A A AAAAA AA   +     A 
Sbjct: 101 AAAGAAAAAAAAAGAAEASEAAAGAAAAAAAAAAAAGATATAAAAAGAASAAAAAAGAAE 160

Query: 191 QHAASCNLATA 159
             AA+   A A
Sbjct: 161 APAAAAGAAAA 171

 Score = 38.9 bits (89), Expect = 0.018
 Identities = 27/64 (42%), Positives = 33/64 (51%)
 Frame = +1

Query: 160 AVARLQLAACCPAPHRRRLSVSAAAAAAAAPAAAAAVAAAAVAGGSAPAVFGVPAADIFS 339
           A A    AA   A      + +AAA AAAA AAA   AAAA AG +A A     AA   +
Sbjct: 26  AAAAAAAAAAAAAATGAAATTAAAAGAAAAAAAATTAAAAAAAGAAATAGAAAAAAAAGA 85

Query: 340 ASSA 351
           A++A
Sbjct: 86  AATA 89

 Score = 38.5 bits (88), Expect = 0.023
 Identities = 28/72 (38%), Positives = 32/72 (43%)
 Frame = -2

Query: 380 AMSAYTGTSTAEEAEKMSAAGTPNTAGALPPATAAAATAAAAAGAAAAAAAADTLSRRR* 201
           A  A T  + A  A   +AA      GA     AAA  AAAAA A  AAAAA   +    
Sbjct: 15  AAPAGTAAAAAAAAAAAAAAAAAAATGAAATTAAAAGAAAAAAAATTAAAAAAAGAAATA 74

Query: 200 GAGQHAASCNLA 165
           GA   AA+   A
Sbjct: 75  GAAAAAAAAGAA 86

 Score = 38.5 bits (88), Expect = 0.023
 Identities = 26/64 (40%), Positives = 31/64 (47%)
 Frame = +1

Query: 160 AVARLQLAACCPAPHRRRLSVSAAAAAAAAPAAAAAVAAAAVAGGSAPAVFGVPAADIFS 339
           A A    AA   A      + + AAAA AA AAAAA  AAA A   A A  G  AA   +
Sbjct: 24  AAAAAAAAAAAAAAAATGAAATTAAAAGAAAAAAAATTAAAAAAAGAAATAGAAAAAAAA 83

Query: 340 ASSA 351
            ++A
Sbjct: 84  GAAA 87

 Score = 38.5 bits (88), Expect = 0.023
 Identities = 28/76 (36%), Positives = 33/76 (42%)
 Frame = +1

Query: 154 GRAVARLQLAACCPAPHRRRLSVSAAAAAAAAPAAAAAVAAAAVAGGSAPAVFGVPAADI 333
           G A A    A    A      + +AAAAAAAA  A A  AAAA A  +A A  G   A  
Sbjct: 104 GAAAAAAAAAGAAEASEAAAGAAAAAAAAAAAAGATATAAAAAGAASAAAAAAGAAEAPA 163

Query: 334 FSASSAVLVPVYALMA 381
            +A +A      A  A
Sbjct: 164 AAAGAAAAAAAAAAAA 179

 Score = 38.5 bits (88), Expect = 0.023
 Identities = 30/74 (40%), Positives = 35/74 (46%), Gaps = 6/74 (8%)
 Frame = +1

Query: 154 GRAVARLQLAACCPAPHRRRLSVSAAAAAAA------APAAAAAVAAAAVAGGSAPAVFG 315
           G A A    AA   A      +  AA+AAAA      APAAAA  AAAA A  +A A   
Sbjct: 124 GAAAAAAAAAAAAGATATAAAAAGAASAAAAAAGAAEAPAAAAGAAAAAAAAAAAAAAAA 183

Query: 316 VPAADIFSASSAVL 357
             AA    A+SA +
Sbjct: 184 ATAAVPAGAASATM 197

 Score = 38.5 bits (88), Expect = 0.023
 Identities = 27/64 (42%), Positives = 31/64 (48%)
 Frame = +1

Query: 160 AVARLQLAACCPAPHRRRLSVSAAAAAAAAPAAAAAVAAAAVAGGSAPAVFGVPAADIFS 339
           A A    AA   A      +  AAAAAAAA AAA A A AA A G+A A      A    
Sbjct: 103 AGAAAAAAAAAGAAEASEAAAGAAAAAAAAAAAAGATATAAAAAGAASAAAAAAGAAEAP 162

Query: 340 ASSA 351
           A++A
Sbjct: 163 AAAA 166

 Score = 38.1 bits (87), Expect = 0.030
 Identities = 28/74 (37%), Positives = 34/74 (45%)
 Frame = +1

Query: 160 AVARLQLAACCPAPHRRRLSVSAAAAAAAAPAAAAAVAAAAVAGGSAPAVFGVPAADIFS 339
           A A    AA   A      + +AA AAA A AAA A AAAA A G+A A      A   +
Sbjct: 70  AAATAGAAAAAAAAGAAATAAAAAGAAATAEAAAGAAAAAAAAAGAAEASEAAAGAAAAA 129

Query: 340 ASSAVLVPVYALMA 381
           A++A      A  A
Sbjct: 130 AAAAAAAGATATAA 143

 Score = 38.1 bits (87), Expect = 0.030
 Identities = 24/52 (46%), Positives = 28/52 (53%)
 Frame = -2

Query: 380 AMSAYTGTSTAEEAEKMSAAGTPNTAGALPPATAAAATAAAAAGAAAAAAAA 225
           A +A  G +    A   +A+     AGA     AAA  AAAAA AAAAAAAA
Sbjct: 131 AAAAAAGATATAAAAAGAASAAAAAAGAAEAPAAAAGAAAAAAAAAAAAAAA 182

 Score = 38.1 bits (87), Expect = 0.030
 Identities = 32/75 (42%), Positives = 37/75 (48%), Gaps = 1/75 (1%)
 Frame = -2

Query: 380 AMSAYTGTSTAEEAEKMSAAGTPNTAGALPPATAAA-ATAAAAAGAAAAAAAADTLSRRR 204
           A +A    + A  A   +AA T   AGA   A AA  A AAAAAGAAA A AA   +   
Sbjct: 25  AAAAAAAAAAAAAAATGAAATTAAAAGAAAAAAAATTAAAAAAAGAAATAGAAAAAAAAG 84

Query: 203 *GAGQHAASCNLATA 159
             A   AA+   ATA
Sbjct: 85  AAATAAAAAGAAATA 99

 Score = 37.7 bits (86), Expect = 0.040
 Identities = 26/66 (39%), Positives = 31/66 (46%)
 Frame = +1

Query: 154 GRAVARLQLAACCPAPHRRRLSVSAAAAAAAAPAAAAAVAAAAVAGGSAPAVFGVPAADI 333
           G A A         A      + + AAAAAAA  AAA  AAAA A  +A A  G  AA  
Sbjct: 51  GAAAAAAAATTAAAAAAAGAAATAGAAAAAAAAGAAATAAAAAGAAATAEAAAGAAAAAA 110

Query: 334 FSASSA 351
            +A +A
Sbjct: 111 AAAGAA 116

 Score = 37.7 bits (86), Expect = 0.040
 Identities = 27/77 (35%), Positives = 33/77 (42%)
 Frame = +1

Query: 121 SAVQRMVRCCNGRAVARLQLAACCPAPHRRRLSVSAAAAAAAAPAAAAAVAAAAVAGGSA 300
           +A         G A      A    A      + +AAAA AAA A AAA AAAA A  +A
Sbjct: 30  AAAAAAAAAATGAAATTAAAAGAAAAAAAATTAAAAAAAGAAATAGAAAAAAAAGAAATA 89

Query: 301 PAVFGVPAADIFSASSA 351
            A  G  A    +A +A
Sbjct: 90  AAAAGAAATAEAAAGAA 106

 Score = 37.7 bits (86), Expect = 0.040
 Identities = 31/74 (41%), Positives = 35/74 (46%)
 Frame = -2

Query: 380 AMSAYTGTSTAEEAEKMSAAGTPNTAGALPPATAAAATAAAAAGAAAAAAAADTLSRRR* 201
           A  A    + A  A   +AAG   TAGA   A AAA  AA AA AA AAA A+       
Sbjct: 49  AAGAAAAAAAATTAAAAAAAGAAATAGAAA-AAAAAGAAATAAAAAGAAATAEA------ 101

Query: 200 GAGQHAASCNLATA 159
            AG  AA+   A A
Sbjct: 102 AAGAAAAAAAAAGA 115

 Score = 37.4 bits (85), Expect = 0.052
 Identities = 27/80 (33%), Positives = 34/80 (41%)
 Frame = +1

Query: 112 ILQSAVQRMVRCCNGRAVARLQLAACCPAPHRRRLSVSAAAAAAAAPAAAAAVAAAAVAG 291
           +LQ AVQ           A    AA   A      + + AAA  AA A AAA AAAA   
Sbjct: 3   LLQLAVQAAAGAAAPAGTAAAAAAAAAAAAAAAAAAATGAAATTAAAAGAAAAAAAATTA 62

Query: 292 GSAPAVFGVPAADIFSASSA 351
            +A A      A   +A++A
Sbjct: 63  AAAAAAGAAATAGAAAAAAA 82

 Score = 37.4 bits (85), Expect = 0.052
 Identities = 32/81 (39%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
 Frame = -2

Query: 380 AMSAYTGTSTAEEAEKMSAAGTPNTAGALPPATAAAATAA-------AAAGAAAAAAAAD 222
           A +A    +    A   +AAG   TA A   A AAAA AA       AAAGAAAAAAAA 
Sbjct: 74  AGAAAAAAAAGAAATAAAAAGAAATAEAAAGAAAAAAAAAGAAEASEAAAGAAAAAAAAA 133

Query: 221 TLSRRR*GAGQHAASCNLATA 159
             +     A   A + + A A
Sbjct: 134 AAAGATATAAAAAGAASAAAA 154

 Score = 37.0 bits (84), Expect = 0.068
 Identities = 29/68 (42%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
 Frame = +1

Query: 160 AVARLQLAACCPAPHRRRLSVSAAAAAAAAPAAAAAVAA---AAVAGGSAPAVFGVPAAD 330
           A A    AA   A      + +AAAA AA+ AAAAA AA   AA AG +A A     AA 
Sbjct: 121 AAAGAAAAAAAAAAAAGATATAAAAAGAASAAAAAAGAAEAPAAAAGAAAAAAAAAAAAA 180

Query: 331 IFSASSAV 354
             +A++AV
Sbjct: 181 AAAATAAV 188

 Score = 36.6 bits (83), Expect = 0.089
 Identities = 28/74 (37%), Positives = 33/74 (43%)
 Frame = -2

Query: 380 AMSAYTGTSTAEEAEKMSAAGTPNTAGALPPATAAAATAAAAAGAAAAAAAADTLSRRR* 201
           A +     + A  A   +AA    T  A   A AA A AAAAA   AAAAAA   +    
Sbjct: 16  APAGTAAAAAAAAAAAAAAAAAAATGAAATTAAAAGAAAAAAAATTAAAAAAAGAAATAG 75

Query: 200 GAGQHAASCNLATA 159
            A   AA+   ATA
Sbjct: 76  AAAAAAAAGAAATA 89

 Score = 36.6 bits (83), Expect = 0.089
 Identities = 31/81 (38%), Positives = 35/81 (42%), Gaps = 7/81 (8%)
 Frame = -2

Query: 380 AMSAYTGTSTAEEAEKMSAAGTPNTAGALPPATAAAATAAAAA-------GAAAAAAAAD 222
           A +A T  + A  A   + AG    A A   A  AAA A AAA        AAAAAAAA 
Sbjct: 55  AAAAATTAAAAAAAGAAATAGAAAAAAAAGAAATAAAAAGAAATAEAAAGAAAAAAAAAG 114

Query: 221 TLSRRR*GAGQHAASCNLATA 159
                   AG  AA+   A A
Sbjct: 115 AAEASEAAAGAAAAAAAAAAA 135

 Score = 36.2 bits (82), Expect = 0.12
 Identities = 23/55 (41%), Positives = 28/55 (50%)
 Frame = +1

Query: 217 SVSAAAAAAAAPAAAAAVAAAAVAGGSAPAVFGVPAADIFSASSAVLVPVYALMA 381
           + +AAAAAAAA A  AA   AA AG +A A     AA   +A +A      A  A
Sbjct: 27  AAAAAAAAAAAAATGAAATTAAAAGAAAAAAAATTAAAAAAAGAAATAGAAAAAA 81

 Score = 36.2 bits (82), Expect = 0.12
 Identities = 25/67 (37%), Positives = 31/67 (45%)
 Frame = +1

Query: 181 AACCPAPHRRRLSVSAAAAAAAAPAAAAAVAAAAVAGGSAPAVFGVPAADIFSASSAVLV 360
           AA   A      + +AAA AA+A AAAA  A A  A   A A     AA   +A++   V
Sbjct: 129 AAAAAAAAGATATAAAAAGAASAAAAAAGAAEAPAAAAGAAAAAAAAAAAAAAAAATAAV 188

Query: 361 PVYALMA 381
           P  A  A
Sbjct: 189 PAGAASA 195

 Score = 35.8 bits (81), Expect = 0.15
 Identities = 23/55 (41%), Positives = 29/55 (51%)
 Frame = +1

Query: 217 SVSAAAAAAAAPAAAAAVAAAAVAGGSAPAVFGVPAADIFSASSAVLVPVYALMA 381
           + +AAAAAA A A AAA A AA A  +A      PAA   +A++A      A  A
Sbjct: 128 AAAAAAAAAGATATAAAAAGAASAAAAAAGAAEAPAAAAGAAAAAAAAAAAAAAA 182

 Score = 35.8 bits (81), Expect = 0.15
 Identities = 30/79 (37%), Positives = 36/79 (44%), Gaps = 11/79 (13%)
 Frame = -2

Query: 380 AMSAYTGTSTAEEAEKMSAAGTPNTAGALPPATAAAATA-----------AAAAGAAAAA 234
           A  A  G + A  A   +A  T   A A   A+AAAA A           AAAA AAAAA
Sbjct: 118 ASEAAAGAAAAAAAAAAAAGATATAAAAAGAASAAAAAAGAAEAPAAAAGAAAAAAAAAA 177

Query: 233 AAADTLSRRR*GAGQHAAS 177
           AAA   +     AG  +A+
Sbjct: 178 AAAAAAATAAVPAGAASAT 196

 Score = 35.8 bits (81), Expect = 0.15
 Identities = 29/74 (39%), Positives = 33/74 (44%)
 Frame = -2

Query: 380 AMSAYTGTSTAEEAEKMSAAGTPNTAGALPPATAAAATAAAAAGAAAAAAAADTLSRRR* 201
           A +A T  + A  A    AA     A A     A A+ AAA A AAAAAAAA   +    
Sbjct: 83  AGAAATAAAAAGAAATAEAAAGAAAAAAAAAGAAEASEAAAGAAAAAAAAAAAAGATATA 142

Query: 200 GAGQHAASCNLATA 159
            A   AAS   A A
Sbjct: 143 AAAAGAASAAAAAA 156

 Score = 35.0 bits (79), Expect = 0.26
 Identities = 28/70 (40%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
 Frame = +1

Query: 181 AACCPAPHRRRLSVSAAAAAAAAPAAAAAVAAA---AVAGGSAPAVFGVPAADIFSASSA 351
           AA   A      + +AAAA AAA AAAAA AAA   A AG +A A     AA+   A++ 
Sbjct: 65  AAAAGAAATAGAAAAAAAAGAAATAAAAAGAAATAEAAAGAAAAAAAAAGAAEASEAAAG 124

Query: 352 VLVPVYALMA 381
                 A  A
Sbjct: 125 AAAAAAAAAA 134

 Score = 35.0 bits (79), Expect = 0.26
 Identities = 29/72 (40%), Positives = 34/72 (46%), Gaps = 9/72 (12%)
 Frame = +1

Query: 160 AVARLQLAACCPAPHRRRLSVSAAAAA---------AAAPAAAAAVAAAAVAGGSAPAVF 312
           A A    AA   A        +AAAAA         AAA AAAAA AAAA AG +A A  
Sbjct: 85  AAATAAAAAGAAATAEAAAGAAAAAAAAAGAAEASEAAAGAAAAAAAAAAAAGATATAAA 144

Query: 313 GVPAADIFSASS 348
              AA   +A++
Sbjct: 145 AAGAASAAAAAA 156

 Score = 34.7 bits (78), Expect = 0.34
 Identities = 29/77 (37%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
 Frame = +1

Query: 160 AVARLQLAACCPAPHRRRLSVSAAAAAAAAPAAAAAVA---AAAVAGGSAPAVFGVPAAD 330
           A A    AA   A        +A AAAAAA AAAAA A   AAA AG ++ A     AA+
Sbjct: 101 AAAGAAAAAAAAAGAAEASEAAAGAAAAAAAAAAAAGATATAAAAAGAASAAAAAAGAAE 160

Query: 331 IFSASSAVLVPVYALMA 381
             +A++       A  A
Sbjct: 161 APAAAAGAAAAAAAAAA 177

 Score = 34.7 bits (78), Expect = 0.34
 Identities = 24/64 (37%), Positives = 30/64 (46%)
 Frame = +1

Query: 160 AVARLQLAACCPAPHRRRLSVSAAAAAAAAPAAAAAVAAAAVAGGSAPAVFGVPAADIFS 339
           A A     A   A        +A AAAAAA AA AA A+ A AG +A A     AA   +
Sbjct: 81  AAAGAAATAAAAAGAAATAEAAAGAAAAAAAAAGAAEASEAAAGAAAAAAAAAAAAGATA 140

Query: 340 ASSA 351
            ++A
Sbjct: 141 TAAA 144

 Score = 34.3 bits (77), Expect = 0.44
 Identities = 26/72 (36%), Positives = 31/72 (42%)
 Frame = -2

Query: 374 SAYTGTSTAEEAEKMSAAGTPNTAGALPPATAAAATAAAAAGAAAAAAAADTLSRRR*GA 195
           +A    + A  A   +AA T   A     A AAAA AAA   AAAAAA A   +     A
Sbjct: 21  AAAAAAAAAAAAAAAAAAATGAAATTAAAAGAAAAAAAATTAAAAAAAGAAATAGAAAAA 80

Query: 194 GQHAASCNLATA 159
               A+   A A
Sbjct: 81  AAAGAAATAAAA 92

 Score = 34.3 bits (77), Expect = 0.44
 Identities = 27/67 (40%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
 Frame = +1

Query: 160 AVARLQLAACCPAPHRRRLSVSAAAAAAAA---PAAAAAVAAAAVAGGSAPAVFGVPAAD 330
           A A    AA          + + AAAAAAA    AAAAA  AAA AG +A A     AA 
Sbjct: 29  AAAAAAAAAAATGAAATTAAAAGAAAAAAAATTAAAAAAAGAAATAGAAAAAAAAGAAAT 88

Query: 331 IFSASSA 351
             +A+ A
Sbjct: 89  AAAAAGA 95

 Score = 34.3 bits (77), Expect = 0.44
 Identities = 25/64 (39%), Positives = 30/64 (46%)
 Frame = +1

Query: 160 AVARLQLAACCPAPHRRRLSVSAAAAAAAAPAAAAAVAAAAVAGGSAPAVFGVPAADIFS 339
           A A    AA   A      + +AAA AA A  AAA  AAAA A  +A       AA   +
Sbjct: 89  AAAAAGAAATAEAAAGAAAAAAAAAGAAEASEAAAGAAAAAAAAAAAAGATATAAAAAGA 148

Query: 340 ASSA 351
           AS+A
Sbjct: 149 ASAA 152

 Score = 33.9 bits (76), Expect = 0.57
 Identities = 22/55 (40%), Positives = 28/55 (50%)
 Frame = +1

Query: 217 SVSAAAAAAAAPAAAAAVAAAAVAGGSAPAVFGVPAADIFSASSAVLVPVYALMA 381
           + + A  AAAA AAAAA AAAA A  +  A     AA   +A++A      A  A
Sbjct: 14  AAAPAGTAAAAAAAAAAAAAAAAAAATGAAATTAAAAGAAAAAAAATTAAAAAAA 68

 Score = 33.9 bits (76), Expect = 0.57
 Identities = 26/58 (44%), Positives = 31/58 (52%), Gaps = 1/58 (1%)
 Frame = +1

Query: 211 RLSVSAAAAAAA-APAAAAAVAAAAVAGGSAPAVFGVPAADIFSASSAVLVPVYALMA 381
           +L+V AAA AAA A  AAAA AAAA A  +A A     AA   +A+ A      A  A
Sbjct: 5   QLAVQAAAGAAAPAGTAAAAAAAAAAAAAAAAAAATGAAATTAAAAGAAAAAAAATTA 62

 Score = 33.9 bits (76), Expect = 0.57
 Identities = 24/64 (37%), Positives = 29/64 (44%)
 Frame = +1

Query: 160 AVARLQLAACCPAPHRRRLSVSAAAAAAAAPAAAAAVAAAAVAGGSAPAVFGVPAADIFS 339
           A A    AA   A        +A A AAAA AAA A A AA A G+A        A   +
Sbjct: 50  AGAAAAAAAATTAAAAAAAGAAATAGAAAAAAAAGAAATAAAAAGAAATAEAAAGAAAAA 109

Query: 340 ASSA 351
           A++A
Sbjct: 110 AAAA 113

 Score = 33.9 bits (76), Expect = 0.57
 Identities = 24/64 (37%), Positives = 30/64 (46%)
 Frame = +1

Query: 160 AVARLQLAACCPAPHRRRLSVSAAAAAAAAPAAAAAVAAAAVAGGSAPAVFGVPAADIFS 339
           A A    AA          + +A AAAAAA A  AA AAAA A  +A A     AA   +
Sbjct: 28  AAAAAAAAAAAATGAAATTAAAAGAAAAAAAATTAAAAAAAGAAATAGAAAAAAAAGAAA 87

Query: 340 ASSA 351
            ++A
Sbjct: 88  TAAA 91

 Score = 33.9 bits (76), Expect = 0.57
 Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
 Frame = +1

Query: 154 GRAVARLQLAACCPAPHRRRLSVSAAAAAAAAPAAAAAVAAAAVAGG--SAPAVFGVPAA 327
           G A      AA   A      + +A AAA A  AA AA AAAA AG   ++ A  G  AA
Sbjct: 69  GAAATAGAAAAAAAAGAAATAAAAAGAAATAEAAAGAAAAAAAAAGAAEASEAAAGAAAA 128

Query: 328 DIFSASSA 351
              +A++A
Sbjct: 129 AAAAAAAA 136

 Score = 33.5 bits (75), Expect = 0.75
 Identities = 24/64 (37%), Positives = 32/64 (49%)
 Frame = +1

Query: 160 AVARLQLAACCPAPHRRRLSVSAAAAAAAAPAAAAAVAAAAVAGGSAPAVFGVPAADIFS 339
           A A    AA   A      + +AA AAAAA AAA A AAA  A  +A A     A++  +
Sbjct: 64  AAAAAGAAATAGAAAAAAAAGAAATAAAAAGAAATAEAAAGAAAAAAAAAGAAEASEAAA 123

Query: 340 ASSA 351
            ++A
Sbjct: 124 GAAA 127

 Score = 33.5 bits (75), Expect = 0.75
 Identities = 25/64 (39%), Positives = 31/64 (48%)
 Frame = +1

Query: 160 AVARLQLAACCPAPHRRRLSVSAAAAAAAAPAAAAAVAAAAVAGGSAPAVFGVPAADIFS 339
           A A    AA   A      + + AAA A A AAAAA  AAA A  +A A     AA   +
Sbjct: 47  AAAAGAAAAAAAATTAAAAAAAGAAATAGAAAAAAAAGAAATAAAAAGAAATAEAAAGAA 106

Query: 340 ASSA 351
           A++A
Sbjct: 107 AAAA 110

 Score = 33.1 bits (74), Expect = 0.98
 Identities = 24/64 (37%), Positives = 29/64 (44%)
 Frame = +1

Query: 160 AVARLQLAACCPAPHRRRLSVSAAAAAAAAPAAAAAVAAAAVAGGSAPAVFGVPAADIFS 339
           A A    AA          +  AAA A AA AAAAA AAA  A  +  A     AA   +
Sbjct: 48  AAAGAAAAAAAATTAAAAAAAGAAATAGAAAAAAAAGAAATAAAAAGAAATAEAAAGAAA 107

Query: 340 ASSA 351
           A++A
Sbjct: 108 AAAA 111

 Score = 31.2 bits (69), Expect = 3.7
 Identities = 21/55 (38%), Positives = 26/55 (47%)
 Frame = -2

Query: 380 AMSAYTGTSTAEEAEKMSAAGTPNTAGALPPATAAAATAAAAAGAAAAAAAADTL 216
           A +A   ++ A  A    A      A A   A AAAA AAAA  A  A AA+ T+
Sbjct: 143 AAAAGAASAAAAAAGAAEAPAAAAGAAAAAAAAAAAAAAAAATAAVPAGAASATM 197

>gb|AAO38468.1| putative transcription activator [Oryza sativa (japonica
           cultivar-group)]
          Length = 603

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 23/59 (38%), Positives = 34/59 (56%), Gaps = 2/59 (3%)
 Frame = +1

Query: 157 RAVARLQLAACCPAPH--RRRLSVSAAAAAAAAPAAAAAVAAAAVAGGSAPAVFGVPAA 327
           +  A   L A C   H   + LS S++A++ ++    AAVAAAA AGG+ P  +G PA+
Sbjct: 77  KVAAPFLLGASCSPGHGGEQMLSFSSSASSCSSGGGGAAVAAAAAAGGAMPLYYGTPAS 135

>ref|NP_611958.1| CG18510-PA [Drosophila melanogaster] gi|21645074|gb|AAG22200.2|
           CG18510-PA [Drosophila melanogaster]
          Length = 438

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = -2

Query: 380 AMSAYTGTSTAEEAEKMSAAGTPNTAGALPPATAAAATAAAAAGAAAAAAAADTLSRRR* 201
           A++  +G      +   SA  TP  A     A AAAA  +AA+ +AAAAAAA+T   R+ 
Sbjct: 11  ALAFISGARRGSSSSISSATATPTAAATSAAAAAAAAATSAASTSAAAAAAANTAGGRKR 70

Query: 200 G-AGQHAASCNLATARP 153
           G +G       +AT  P
Sbjct: 71  GRSGGGVGGGGVATTLP 87

 Score = 30.4 bits (67), Expect = 6.4
 Identities = 20/42 (47%), Positives = 24/42 (56%), Gaps = 3/42 (7%)
 Frame = +1

Query: 178 LAACCPAPHRRRLSVSAAAAAAAAPAA---AAAVAAAAVAGG 294
           +++    P     S +AAAAAAA  AA   AAA AAA  AGG
Sbjct: 26  ISSATATPTAAATSAAAAAAAAATSAASTSAAAAAAANTAGG 67

>gb|AAN03677.1|AF411696_1 Siah [Danio rerio]
          Length = 331

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 30/53 (56%), Positives = 32/53 (59%)
 Frame = +1

Query: 217 SVSAAAAAAAAPAAAAAVAAAAVAGGSAPAVFGVPAADIFSASSAVLVPVYAL 375
           + SAAAAAAAA AAAAA AAAA   GS      VPAA       AV +PV AL
Sbjct: 31  TASAAAAAAAAAAAAAAAAAAAGVSGSVAGSGTVPAA-------AVALPVAAL 76

 Score = 33.9 bits (76), Expect = 0.57
 Identities = 20/34 (58%), Positives = 23/34 (66%)
 Frame = -2

Query: 326 AAGTPNTAGALPPATAAAATAAAAAGAAAAAAAA 225
           A G+ +       A+AAAA AAAAA AAAAAAAA
Sbjct: 19  AGGSKHGGSGGTTASAAAAAAAAAAAAAAAAAAA 52

 Score = 33.1 bits (74), Expect = 0.98
 Identities = 22/44 (50%), Positives = 26/44 (59%)
 Frame = -2

Query: 323 AGTPNTAGALPPATAAAATAAAAAGAAAAAAAADTLSRRR*GAG 192
           AG     G+     +AAA AAAAA AAAAAAAA  +S    G+G
Sbjct: 19  AGGSKHGGSGGTTASAAAAAAAAAAAAAAAAAAAGVSGSVAGSG 62

 Score = 31.6 bits (70), Expect = 2.9
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = -2

Query: 329 SAAGTPNTAGALPPATAAAATAAAAAGAAAAAAAADTL 216
           S   T + A A   A AAAA AAAAAG + + A + T+
Sbjct: 27  SGGTTASAAAAAAAAAAAAAAAAAAAGVSGSVAGSGTV 64

 Score = 31.6 bits (70), Expect = 2.9
 Identities = 21/48 (43%), Positives = 25/48 (51%)
 Frame = -2

Query: 374 SAYTGTSTAEEAEKMSAAGTPNTAGALPPATAAAATAAAAAGAAAAAA 231
           S+  G +    A K   +    + G    A AAAA AAAAA AAAAAA
Sbjct: 5   SSAGGAAGGLGAGKAGGSKHGGSGGTTASAAAAAAAAAAAAAAAAAAA 52

>ref|ZP_00089403.1| COG0811: Biopolymer transport proteins [Azotobacter vinelandii]
          Length = 359

 Score = 41.6 bits (96), Expect = 0.003
 Identities = 32/72 (44%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
 Frame = -2

Query: 362 GTSTAEEAEKMSAAGTPNTAGA--LP----PATAAAATAAAAAGAAAAAAAADTLSRRR* 201
           GTS A  A   SAA TP  AGA  LP    P   A A A   AG A AAA AD  S    
Sbjct: 53  GTSPASTAASPSAAATPPAAGAPALPATDAPTDPATAAAGQPAGEAGAAAPADASSAAVP 112

Query: 200 GAGQHAASCNLA 165
           G  +  A   LA
Sbjct: 113 GEAEEPAESGLA 124



EST assemble image


clone accession position
1 HC097g07_r AV639313 1 492
2 HC030f02_r AV634214 71 491




Chlamydomonas reinhardtii
Kazusa DNA Research Institute