Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001937A_C01 KCC001937A_c01
(1127 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_217018.1| accD1 [Mycobacterium tuberculosis H37Rv] gi|158... 284 2e-75
ref|ZP_00058397.1| COG4799: Acetyl-CoA carboxylase, carboxyltran... 283 3e-75
ref|NP_627006.1| acetyl/propionyl CoA carboxylase, beta subunit ... 283 3e-75
gb|AAL92331.2| similar to Agrobacterium tumefaciens (strain C58 ... 283 4e-75
ref|NP_567950.1| 3-methylcrotonyl-CoA carboxylase non-biotinylat... 282 7e-75
>ref|NP_217018.1| accD1 [Mycobacterium tuberculosis H37Rv] gi|15842030|ref|NP_337067.1|
propionyl-CoA carboxylase, beta subunit [Mycobacterium
tuberculosis CDC1551] gi|7438116|pir||F70550 probable
accD1 protein - Mycobacterium tuberculosis (strain H37RV)
gi|2113935|emb|CAB08920.1| accD1 [Mycobacterium
tuberculosis H37Rv] gi|13882308|gb|AAK46881.1|
propionyl-CoA carboxylase, beta subunit [Mycobacterium
tuberculosis CDC1551]
Length = 529
Score = 284 bits (727), Expect = 2e-75
Identities = 143/196 (72%), Positives = 157/196 (79%)
Frame = +1
Query: 538 QLLTHMNGLHAVARAGGGATAIARHRSRNKLLPRERIDALLDEGSPFLELSPLAGRGLYG 717
+L+ +N A A GG A RH SR KLLPRER+D LLD GSPFLEL+PLA G+YG
Sbjct: 18 RLVAELNNKLAAAALGGNERARKRHVSRGKLLPRERVDRLLDPGSPFLELAPLAAGGMYG 77
Query: 718 DDDVAGGGIVTGIGKVQGRLVAIVANDATVKGGTYYPITVKKHLRLQEVAAQCQLPCLYL 897
D+ G GI+TGIG+V GR IVANDATVKGGTYYP+TVKKHLR QEVA Q LPC+YL
Sbjct: 78 DES-PGAGIITGIGRVSGRQCVIVANDATVKGGTYYPMTVKKHLRAQEVALQNMLPCIYL 136
Query: 898 VDSGGANLPRQAEVFPDRDHFGRIFYNQARMSAAGIPQIAVVLGSCTAGGAYVPAMADEC 1077
VDSGGA LPRQ EVFPDR+HFGRIFYNQA MSA GIPQ+A VLGSCTAGGAYVPAM+DE
Sbjct: 137 VDSGGAFLPRQDEVFPDREHFGRIFYNQATMSAKGIPQVAAVLGSCTAGGAYVPAMSDEA 196
Query: 1078 VIVRGNGTIFLGGPPL 1125
VIVR GTIFLGGPPL
Sbjct: 197 VIVREQGTIFLGGPPL 212
>ref|ZP_00058397.1| COG4799: Acetyl-CoA carboxylase, carboxyltransferase component
(subunits alpha and beta) [Thermobifida fusca]
Length = 551
Score = 283 bits (725), Expect = 3e-75
Identities = 150/225 (66%), Positives = 166/225 (73%), Gaps = 2/225 (0%)
Frame = +1
Query: 457 TATTSSASNVLAPALDREAVANTAAMSQLLTHMNGLHAVARAGGGATAIARHRSRNKLLP 636
TAT +SA + +PA A N A ++L + A A GG A RH++R KLL
Sbjct: 14 TATLTSAIDPTSPAFHANAETNRALAAELRRRL----ADAARGGPPHARERHKARGKLLA 69
Query: 637 RERIDALLDEGSPFLELSPLAGRGLYGDD--DVAGGGIVTGIGKVQGRLVAIVANDATVK 810
RERIDALLD G+PFLELSPLA G+YG D D GI+TGIG+V GR IVANDATVK
Sbjct: 70 RERIDALLDPGTPFLELSPLAAHGMYGPDGNDAPAAGIITGIGRVSGRETVIVANDATVK 129
Query: 811 GGTYYPITVKKHLRLQEVAAQCQLPCLYLVDSGGANLPRQAEVFPDRDHFGRIFYNQARM 990
GG+YYP+TVKKHLR QEVA LPC+YLVDSGGA LP Q EVFPDRDHFGRIFYNQA M
Sbjct: 130 GGSYYPMTVKKHLRAQEVALHNHLPCIYLVDSGGAFLPMQDEVFPDRDHFGRIFYNQATM 189
Query: 991 SAAGIPQIAVVLGSCTAGGAYVPAMADECVIVRGNGTIFLGGPPL 1125
S GIPQIA VLGSCTAGGAYVPAM+DE VIVR GTIFLGGPPL
Sbjct: 190 SQRGIPQIAAVLGSCTAGGAYVPAMSDEAVIVRNQGTIFLGGPPL 234
>ref|NP_627006.1| acetyl/propionyl CoA carboxylase, beta subunit [Streptomyces
coelicolor A3(2)] gi|7544040|emb|CAB87213.1|
acetyl/propionyl CoA carboxylase, beta subunit
[Streptomyces coelicolor A3(2)]
Length = 538
Score = 283 bits (725), Expect = 3e-75
Identities = 144/203 (70%), Positives = 159/203 (77%)
Frame = +1
Query: 517 ANTAAMSQLLTHMNGLHAVARAGGGATAIARHRSRNKLLPRERIDALLDEGSPFLELSPL 696
AN A + L+ + A AR GGG A ARH +R KLLPR+R+D LLD GSPFLEL+PL
Sbjct: 20 ANEEAHAALVQELRAKLAAARLGGGERARARHTARGKLLPRDRVDTLLDPGSPFLELAPL 79
Query: 697 AGRGLYGDDDVAGGGIVTGIGKVQGRLVAIVANDATVKGGTYYPITVKKHLRLQEVAAQC 876
A GLY D G++ GIG+V GR IVANDATVKGGTYYP+TVKKHLR QEVA +
Sbjct: 80 AADGLY-DGAAPAAGVIAGIGRVSGRECVIVANDATVKGGTYYPMTVKKHLRAQEVALEN 138
Query: 877 QLPCLYLVDSGGANLPRQAEVFPDRDHFGRIFYNQARMSAAGIPQIAVVLGSCTAGGAYV 1056
+LPCLYLVDSGGA LP Q EVFPDR+HFGRIFYNQARMS AGIPQIA VLGSCTAGGAYV
Sbjct: 139 RLPCLYLVDSGGAFLPMQDEVFPDREHFGRIFYNQARMSGAGIPQIAAVLGSCTAGGAYV 198
Query: 1057 PAMADECVIVRGNGTIFLGGPPL 1125
PAM+DE VIVR GTIFLGGPPL
Sbjct: 199 PAMSDEAVIVRNQGTIFLGGPPL 221
Score = 36.2 bits (82), Expect = 1.1
Identities = 26/107 (24%), Positives = 47/107 (43%)
Frame = +1
Query: 733 GGGIVTGIGKVQGRLVAIVANDATVKGGTYYPITVKKHLRLQEVAAQCQLPCLYLVDSGG 912
G +VTG ++ G V IVAN+ G + + +K E+ Q +P ++L + G
Sbjct: 327 GQTLVTGFARIHGHPVGIVANN-----GILFSESAQKGAHFIELCDQRGIPLVFLQNISG 381
Query: 913 ANLPRQAEVFPDRDHFGRIFYNQARMSAAGIPQIAVVLGSCTAGGAY 1053
+ R E H ++ ++ +P++ VV+G G Y
Sbjct: 382 FMVGRDYEAGGIAKHGAKMV---TAVACTRVPKLTVVVGGSYGAGNY 425
>gb|AAL92331.2| similar to Agrobacterium tumefaciens (strain C58 / ATCC 33970).
3-methylcrotonoyl-CoA carboxylase beta subunit
[Dictyostelium discoideum]
Length = 588
Score = 283 bits (724), Expect = 4e-75
Identities = 144/227 (63%), Positives = 171/227 (74%), Gaps = 3/227 (1%)
Frame = +1
Query: 454 STATTSSASNVLAPALDREAVA---NTAAMSQLLTHMNGLHAVARAGGGATAIARHRSRN 624
S++TT N+L +D+ + N M+ L + + GGG ++ SR
Sbjct: 43 SSSTTDRTFNILDGTIDKNSAEYKDNLINMNSTLKQLKENIEKIKLGGGEKLNQKNISRG 102
Query: 625 KLLPRERIDALLDEGSPFLELSPLAGRGLYGDDDVAGGGIVTGIGKVQGRLVAIVANDAT 804
KLL RERI+AL+D GSPFLE S LAG G+YG ++VA GGI+TGIGK+ G IVAND+T
Sbjct: 103 KLLVRERIEALIDVGSPFLEFSQLAGWGMYGKEEVAAGGIITGIGKIHGVECVIVANDST 162
Query: 805 VKGGTYYPITVKKHLRLQEVAAQCQLPCLYLVDSGGANLPRQAEVFPDRDHFGRIFYNQA 984
VKGGTY+PITVKKHLR QE+A + LPC+YLVDSGGANLPRQA+VFPDRDHFGRIF+NQA
Sbjct: 163 VKGGTYFPITVKKHLRAQEIAQENNLPCIYLVDSGGANLPRQADVFPDRDHFGRIFFNQA 222
Query: 985 RMSAAGIPQIAVVLGSCTAGGAYVPAMADECVIVRGNGTIFLGGPPL 1125
MSA IPQIAVV+GSCTAGGAYVPAMADE VIV+G GTIFLGGPPL
Sbjct: 223 NMSAKRIPQIAVVMGSCTAGGAYVPAMADESVIVKGTGTIFLGGPPL 269
>ref|NP_567950.1| 3-methylcrotonyl-CoA carboxylase non-biotinylated subunit (MCCB)
[Arabidopsis thaliana] gi|20455074|sp|Q9LDD8|MCCB_ARATH
Methylcrotonyl-CoA carboxylase beta chain, mitochondrial
precursor (3-Methylcrotonyl-CoA carboxylase 2) (MCCase
beta subunit) (3-methylcrotonyl-CoA:carbon dioxide ligase
beta subunit) gi|7021222|gb|AAF35258.1|AF059510_1
3-methylcrotonyl-CoA carboxylase non-biotinylated subunit
[Arabidopsis thaliana]
gi|7021224|gb|AAF35259.1|AF059511_1 3-methylcrotonyl-CoA
carboxylase nonbiotinylated subunit [Arabidopsis
thaliana] gi|23198352|gb|AAN15703.1| Unknown protein
[Arabidopsis thaliana]
Length = 587
Score = 282 bits (722), Expect = 7e-75
Identities = 139/217 (64%), Positives = 172/217 (79%), Gaps = 3/217 (1%)
Frame = +1
Query: 484 VLAPALDREAVA---NTAAMSQLLTHMNGLHAVARAGGGATAIARHRSRNKLLPRERIDA 654
+L +DR + A N+ AM +L+ + AGGG A+ R+RSRNKLLPRERID
Sbjct: 49 ILPDGVDRNSEAFSSNSIAMEGILSELRSHIKKVLAGGGEEAVKRNRSRNKLLPRERIDR 108
Query: 655 LLDEGSPFLELSPLAGRGLYGDDDVAGGGIVTGIGKVQGRLVAIVANDATVKGGTYYPIT 834
LLD GS FLELS LAG LY ++ + GGI+TGIG + GR+ +AND TVKGGTYYPIT
Sbjct: 109 LLDPGSSFLELSQLAGHELY-EEPLPSGGIITGIGPIHGRICMFMANDPTVKGGTYYPIT 167
Query: 835 VKKHLRLQEVAAQCQLPCLYLVDSGGANLPRQAEVFPDRDHFGRIFYNQARMSAAGIPQI 1014
+KKHLR QE+AA+C+LPC+YLVDSGGA LP+QAEVFPD+++FGR+FYN++ MS+ GIPQI
Sbjct: 168 IKKHLRAQEIAARCRLPCIYLVDSGGAYLPKQAEVFPDKENFGRVFYNESVMSSDGIPQI 227
Query: 1015 AVVLGSCTAGGAYVPAMADECVIVRGNGTIFLGGPPL 1125
A+VLGSCTAGGAY+PAMADE V+V+GNGTIFL GPPL
Sbjct: 228 AIVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPL 264
