Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001936A_C01 KCC001936A_c01
(540 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_564482.1| expressed protein [Arabidopsis thaliana] gi|253... 47 7e-11
dbj|BAB10193.1| protein; similar to unknown protein [Arabidopsis... 44 2e-08
gb|AAL32857.1| Unknown protein [Arabidopsis thaliana] 44 2e-08
ref|NP_197169.2| protein; similar to unknown protein (gb|AAF2696... 44 2e-08
ref|NP_186940.1| expressed protein [Arabidopsis thaliana] gi|672... 40 4e-07
>ref|NP_564482.1| expressed protein [Arabidopsis thaliana] gi|25373224|pir||B96497
unknown protein [imported] - Arabidopsis thaliana
gi|12323056|gb|AAG51516.1|AC068324_4 unknown protein
[Arabidopsis thaliana]
gi|13878131|gb|AAK44143.1|AF370328_1 unknown protein
[Arabidopsis thaliana] gi|17104807|gb|AAL34292.1|
unknown protein [Arabidopsis thaliana]
Length = 168
Score = 47.4 bits (111), Expect(2) = 7e-11
Identities = 21/46 (45%), Positives = 34/46 (73%)
Frame = +1
Query: 112 SRNSDSFVAGVVVGGVVFGALGFLFAPQISKALLGDDQRLKLPRLP 249
S ++ FV G ++GG++ GALG ++APQISKA+ G D++ + +LP
Sbjct: 68 SGSTGLFVGGFILGGLIVGALGCVYAPQISKAIAGADRKDLMRKLP 113
Score = 40.8 bits (94), Expect(2) = 7e-11
Identities = 21/41 (51%), Positives = 33/41 (80%)
Frame = +2
Query: 239 PGFLEDEQPKDPEQTKQDLIEKIAQLNASIDEVAAQLKVKE 361
P F+ DE+ K E+T++ L EKIAQLN++ID+V++QLK ++
Sbjct: 113 PKFIYDEE-KALEKTRKVLAEKIAQLNSAIDDVSSQLKSED 152
>dbj|BAB10193.1| protein; similar to unknown protein [Arabidopsis thaliana]
Length = 177
Score = 44.3 bits (103), Expect(2) = 2e-08
Identities = 20/50 (40%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Frame = +1
Query: 106 AESRNSDSFVAGVVVGGVVFGALGFLFAPQISKALLG--DDQRLKLPRLP 249
+ S +S F+AG ++GG VFGA+ ++FAPQI +++L D+ + P+ P
Sbjct: 72 SRSGSSGDFIAGFLLGGAVFGAVAYIFAPQIRRSVLNEEDEYGFEKPKQP 121
Score = 35.4 bits (80), Expect(2) = 2e-08
Identities = 18/42 (42%), Positives = 29/42 (68%), Gaps = 7/42 (16%)
Frame = +2
Query: 257 EQPKDP-------EQTKQDLIEKIAQLNASIDEVAAQLKVKE 361
E+PK P E+T++ L EKI QLN++ID V+++L+ +E
Sbjct: 116 EKPKQPTYYDEGLEKTRETLNEKIGQLNSAIDNVSSRLRGRE 157
>gb|AAL32857.1| Unknown protein [Arabidopsis thaliana]
Length = 168
Score = 44.3 bits (103), Expect(2) = 2e-08
Identities = 20/50 (40%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Frame = +1
Query: 106 AESRNSDSFVAGVVVGGVVFGALGFLFAPQISKALLG--DDQRLKLPRLP 249
+ S +S F+AG ++GG VFGA+ ++FAPQI +++L D+ + P+ P
Sbjct: 63 SRSGSSGDFIAGFLLGGAVFGAVAYIFAPQIRRSVLNEEDEYGFEKPKQP 112
Score = 35.4 bits (80), Expect(2) = 2e-08
Identities = 18/42 (42%), Positives = 29/42 (68%), Gaps = 7/42 (16%)
Frame = +2
Query: 257 EQPKDP-------EQTKQDLIEKIAQLNASIDEVAAQLKVKE 361
E+PK P E+T++ L EKI QLN++ID V+++L+ +E
Sbjct: 107 EKPKQPTYYDEGLEKTRETLNEKIGQLNSAIDNVSSRLRGRE 148
>ref|NP_197169.2| protein; similar to unknown protein (gb|AAF26969.1) -related
[Arabidopsis thaliana] gi|24899755|gb|AAN65092.1|
Unknown protein [Arabidopsis thaliana]
Length = 168
Score = 44.3 bits (103), Expect(2) = 2e-08
Identities = 20/50 (40%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Frame = +1
Query: 106 AESRNSDSFVAGVVVGGVVFGALGFLFAPQISKALLG--DDQRLKLPRLP 249
+ S +S F+AG ++GG VFGA+ ++FAPQI +++L D+ + P+ P
Sbjct: 63 SRSGSSGDFIAGFLLGGAVFGAVAYIFAPQIRRSVLNEEDEYGFEKPKQP 112
Score = 35.4 bits (80), Expect(2) = 2e-08
Identities = 18/42 (42%), Positives = 29/42 (68%), Gaps = 7/42 (16%)
Frame = +2
Query: 257 EQPKDP-------EQTKQDLIEKIAQLNASIDEVAAQLKVKE 361
E+PK P E+T++ L EKI QLN++ID V+++L+ +E
Sbjct: 107 EKPKQPTYYDEGLEKTRETLNEKIGQLNSAIDNVSSRLRGRE 148
>ref|NP_186940.1| expressed protein [Arabidopsis thaliana]
gi|6728971|gb|AAF26969.1|AC018363_14 unknown protein
[Arabidopsis thaliana] gi|27311637|gb|AAO00784.1|
unknown protein [Arabidopsis thaliana]
gi|30102868|gb|AAP21352.1| At3g02900 [Arabidopsis
thaliana]
Length = 162
Score = 39.7 bits (91), Expect(2) = 4e-07
Identities = 18/44 (40%), Positives = 28/44 (62%), Gaps = 1/44 (2%)
Frame = +1
Query: 121 SDSFVAGVVVGGVVFGALGFLFAPQISKALLGDDQ-RLKLPRLP 249
S FV G ++G VFG L ++FAPQI +++L +++ K P P
Sbjct: 59 SSDFVTGFLLGSAVFGTLAYIFAPQIRRSVLSENEYGFKKPEQP 102
Score = 35.8 bits (81), Expect(2) = 4e-07
Identities = 21/54 (38%), Positives = 33/54 (60%), Gaps = 4/54 (7%)
Frame = +2
Query: 242 GFLEDEQP----KDPEQTKQDLIEKIAQLNASIDEVAAQLKVKEGDGMKIESTP 391
GF + EQP + E+ ++ L EKI QLN++ID+V+++LK K S+P
Sbjct: 95 GFKKPEQPMYYDEGLEERREILNEKIGQLNSAIDKVSSRLKGGRSGSSKNTSSP 148
