Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001931A_C01 KCC001931A_c01
(517 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB92794.1| P0039G05.13 [Oryza sativa (japonica cultivar-gro... 36 0.33
ref|ZP_00006631.1| COG3920: Signal transduction histidine kinase... 36 0.33
pir||JC4743 fatty-acid synthase (EC 2.3.1.85) - Mycobacterium bo... 34 1.3
ref|NP_629323.1| putative integral membrane protein [Streptomyce... 34 1.3
ref|NP_419832.1| lpsE protein [Caulobacter crescentus CB15] gi|2... 34 1.3
>dbj|BAB92794.1| P0039G05.13 [Oryza sativa (japonica cultivar-group)]
Length = 461
Score = 35.8 bits (81), Expect = 0.33
Identities = 40/146 (27%), Positives = 61/146 (41%), Gaps = 9/146 (6%)
Frame = -1
Query: 517 PTKSMGRTYPVLRRRLPAAEADIARVPKPMLAPCTPNPSPE--VDASPSCMDIGKEVRRL 344
PT S G+ R PAA A + P P++ P P P+ + ++P + RL
Sbjct: 34 PTPSRGKG----EERRPAAAAYSSGDPIPLIRSLPPPPPPQAPIHSAPRALPPMGVTTRL 89
Query: 343 WLVPGRLMLRCQR*GEEERCRCAAMKGSRSAQAP--RQLSPLALGDK*VMGLG-----RQ 185
PG G + R + S + P R+L+P + G G R+
Sbjct: 90 PAPPGG--------GLQRRAPRGILPASLPVERPARRRLAPGVRAASGIPGPGGSPVPRR 141
Query: 184 LCPAGSAASTAAEPF*AAGALSNAVD 107
PA + A+ AA P AA + S+A+D
Sbjct: 142 TTPAPADAAAAAPPSAAASSASSAID 167
>ref|ZP_00006631.1| COG3920: Signal transduction histidine kinase [Rhodobacter
sphaeroides]
Length = 1096
Score = 35.8 bits (81), Expect = 0.33
Identities = 47/164 (28%), Positives = 60/164 (35%), Gaps = 22/164 (13%)
Frame = -2
Query: 498 GHTLCCGGGCRRQKLTSHVC-------------PNPCSRRARRILARKLMRHRRAWTL-A 361
GH L G R+ H C P PC+R A + R++ R RR
Sbjct: 51 GHALRLDGARGRRMAHVHPCRRPAHYGAGLSAGPPPCARPALHLRDRQVRRPRRVCQRGG 110
Query: 360 KRSEGSGWSLVD------SCCDASDKERRSGADVRL*RAAGAPKRLGS*ARW--RWETSK 205
S G+ L + SC D R+G R RA+G P+ GS AR W ++
Sbjct: 111 AGSRGAPHRLGERDAPPRSCAD----RLRAGHGGRGDRASGEPRLGGSAARGARSWARAR 166
Query: 204 *WVWVDNCVLLAPQLPPRPSLFERRVRSVMLWIKHRAGIRALRR 73
W W A Q P R L R L +HR R R
Sbjct: 167 SWAWTRTRTPCAGQQPAR-GLSACAGRRADLGPRHRGAHRGAYR 209
>pir||JC4743 fatty-acid synthase (EC 2.3.1.85) - Mycobacterium bovis
gi|1036835|gb|AAB03809.1| fatty acid synthase
[Mycobacterium bovis]
Length = 2796
Score = 33.9 bits (76), Expect = 1.3
Identities = 22/69 (31%), Positives = 28/69 (39%)
Frame = +3
Query: 282 RHRSSSPYRWHRNMSRPGTSQSLRTSLPMSMHDGDASTSGLGFGVHGASMGLGTRAMSAS 461
RHR+ P R HR R G L + DG A+ + G+ G G G + A
Sbjct: 2202 RHRADGPQRCHRGRRRRGRGHHL-----LDRRDGAAAARPVSCGIQG---GCGRSPIKAD 2253
Query: 462 AAGSLRRST 488
G L R T
Sbjct: 2254 LTGGLPRPT 2262
>ref|NP_629323.1| putative integral membrane protein [Streptomyces coelicolor A3(2)]
gi|9714460|emb|CAC01376.1| putative integral membrane
protein [Streptomyces coelicolor A3(2)]
Length = 355
Score = 33.9 bits (76), Expect = 1.3
Identities = 19/53 (35%), Positives = 22/53 (40%)
Frame = -3
Query: 377 VHGHWQRGPKALAGPWSTHVAMPAIRRGGAVPMCGYEGQPERPSASAVEPAGV 219
VHGH GP L + A A G +P CG P +A PAGV
Sbjct: 270 VHGHTHAGPFVLTATAAAEAAALATVFAGRLPGCGLLSAPVEALVAACGPAGV 322
>ref|NP_419832.1| lpsE protein [Caulobacter crescentus CB15] gi|25374548|pir||D87375
lpsE protein [imported] - Caulobacter crescentus
gi|6064113|gb|AAF03165.1| putative perosamine
transferase [Caulobacter crescentus]
gi|13422308|gb|AAK23000.1| lpsE protein [Caulobacter
crescentus CB15]
Length = 429
Score = 33.9 bits (76), Expect = 1.3
Identities = 24/71 (33%), Positives = 35/71 (48%), Gaps = 5/71 (7%)
Frame = +3
Query: 270 IAAHRHRSSSPYRWHRNMSRPGTSQSLRTSLPMSMHDGDASTSGLGFGVH-----GASMG 434
+A HRHRS+ R R G + L +LP+++ ++ GLG G MG
Sbjct: 38 LAEHRHRSAERTALARARRRAGP-RGLSPTLPVTVIGFHSAVHGLGEGARMLARGFGDMG 96
Query: 435 LGTRAMSASAA 467
LG RA+ SA+
Sbjct: 97 LGVRALDLSAS 107
