KCC001915A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001915A_C01 KCC001915A_c01
gttcactcttatgctccacagtacctatcgCCAAGCGCTTAAGCCCACTTGGCTGTCATT
CCCCGTTCACGCAAGCGTTGACCTCTTCGTCACAAAATACACATAGCATAGCATTACTTC
ATAGGTTATTTAGCTCGAGTACAAAAATGGTGGAGAAGATGCACACGAAGGTATGCATTA
TTGGGAGCGGGCCTGCAGCGCATACCGCGGCCGTGTACACCGCACGCGCGGAGCTGCAAC
CCATCCTGTTTGAGGGCTTCATGGCCAACGGCATCGCGGCCGGTGGCCAGCTGACCACCA
CCACCGACGTGGAGAACTTTCCGGGCTTTCCCGAGGGTATCCTGGGTGCAGAGCTGACCA
CCCGCTTCCGGGAACAGTCGGAGCGCTTCGGCACCCGCATCTACAGCGAGACGGTGGACA
GCATCGACACCTCCCGGCGGCCCTTCACGGTGCGCACCGCGGACAAGGAGGTCACCGCCG
ACAGCCTCATCATCGCCACGGGCGCGGTGGCGCGGCG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001915A_C01 KCC001915A_c01
         (517 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAD19162.1| NADPH-thioredoxin reductase [Triticum aestivum]       178  4e-44
gb|AAO42318.1| putative thioredoxin reductase (NADPH) 2 [Arabido...   176  2e-43
ref|NP_195271.1| thioredoxin reductase 1 (NADPH-dependent thiore...   176  2e-43
sp|Q39242|TRB2_ARATH Thioredoxin reductase 2 (NADPH-dependent th...   175  4e-43
pir||S44027 thioredoxin-disulfide reductase (EC 1.8.1.9) 2 [vali...   173  1e-42

>emb|CAD19162.1| NADPH-thioredoxin reductase [Triticum aestivum]
          Length = 331

 Score =  178 bits (451), Expect = 4e-44
 Identities = 87/119 (73%), Positives = 102/119 (85%)
 Frame = +3

Query: 159 MHTKVCIIGSGPAAHTAAVYTARAELQPILFEGFMANGIAAGGQLTTTTDVENFPGFPEG 338
           +HT+VCIIGSGPAAHTAAVY ARAEL+P+LFEG++AN IAAGGQLTTTTDVENFPGFP+G
Sbjct: 9   LHTRVCIIGSGPAAHTAAVYAARAELKPVLFEGWLANDIAAGGQLTTTTDVENFPGFPDG 68

Query: 339 ILGAELTTRFREQSERFGTRIYSETVDSIDTSRRPFTVRTADKEVTADSLIIATGAVAR 515
           ILG +L  R R QS RFGT+I+SETV S+D S RPF V + D  V ADS+++ATGAVAR
Sbjct: 69  ILGIDLMDRCRAQSVRFGTKIFSETVTSVDFSSRPFRVSSDDTVVHADSVVVATGAVAR 127

>gb|AAO42318.1| putative thioredoxin reductase (NADPH) 2 [Arabidopsis thaliana]
          Length = 333

 Score =  176 bits (445), Expect = 2e-43
 Identities = 83/122 (68%), Positives = 104/122 (85%)
 Frame = +3

Query: 150 VEKMHTKVCIIGSGPAAHTAAVYTARAELQPILFEGFMANGIAAGGQLTTTTDVENFPGF 329
           +E  +T++CI+GSGPAAHTAA+Y ARAEL+P+LFEG+MAN IA GGQLTTTTDVENFPGF
Sbjct: 4   LETHNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGF 63

Query: 330 PEGILGAELTTRFREQSERFGTRIYSETVDSIDTSRRPFTVRTADKEVTADSLIIATGAV 509
           PEGILG ELT +FR+QSERFGT I++ETV  +D S +PF + T  K + AD++I+ATGAV
Sbjct: 64  PEGILGVELTDKFRKQSERFGTTIFTETVTKVDFSSKPFKLFTDSKAILADAVILATGAV 123

Query: 510 AR 515
           A+
Sbjct: 124 AK 125

>ref|NP_195271.1| thioredoxin reductase 1 (NADPH-dependent thioredoxin reductase 1)
           (NTR1) [Arabidopsis thaliana]
           gi|12644432|sp|Q39243|TRB1_ARATH Thioredoxin reductase 1
           (NADPH-dependent thioredoxin reductase 1) (NTR 1)
           gi|7488370|pir||T41743 thioredoxin-disulfide reductase
           (EC 1.8.1.9) 2 - Arabidopsis thaliana
           gi|5830788|emb|CAB54874.1| thioredoxin reductase (NADPH)
           2 [Arabidopsis thaliana] gi|7270497|emb|CAB80262.1|
           thioredoxin reductase (NADPH) 2 [Arabidopsis thaliana]
          Length = 333

 Score =  176 bits (445), Expect = 2e-43
 Identities = 83/122 (68%), Positives = 104/122 (85%)
 Frame = +3

Query: 150 VEKMHTKVCIIGSGPAAHTAAVYTARAELQPILFEGFMANGIAAGGQLTTTTDVENFPGF 329
           +E  +T++CI+GSGPAAHTAA+Y ARAEL+P+LFEG+MAN IA GGQLTTTTDVENFPGF
Sbjct: 4   LETHNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGF 63

Query: 330 PEGILGAELTTRFREQSERFGTRIYSETVDSIDTSRRPFTVRTADKEVTADSLIIATGAV 509
           PEGILG ELT +FR+QSERFGT I++ETV  +D S +PF + T  K + AD++I+ATGAV
Sbjct: 64  PEGILGVELTDKFRKQSERFGTTIFTETVTKVDFSSKPFKLFTDSKAILADAVILATGAV 123

Query: 510 AR 515
           A+
Sbjct: 124 AK 125

>sp|Q39242|TRB2_ARATH Thioredoxin reductase 2 (NADPH-dependent thioredoxin reductase 2)
           (NTR 2) gi|25528214|pir||A84552 probable thioredoxin
           reductase [imported] - Arabidopsis thaliana
           gi|2262173|gb|AAB86519.1| putative thioredoxin reductase
           [Arabidopsis thaliana]
          Length = 383

 Score =  175 bits (443), Expect = 4e-43
 Identities = 90/151 (59%), Positives = 114/151 (74%), Gaps = 5/151 (3%)
 Frame = +3

Query: 78  LTSSSQNTHSIALLHRLFSSSTKM-----VEKMHTKVCIIGSGPAAHTAAVYTARAELQP 242
           L S+  N  S+A      SSS+       +E   TKVCI+GSGPAAHTAA+Y +RAEL+P
Sbjct: 25  LGSALSNPPSLATAFSSSSSSSSAAAAVDMETHKTKVCIVGSGPAAHTAAIYASRAELKP 84

Query: 243 ILFEGFMANGIAAGGQLTTTTDVENFPGFPEGILGAELTTRFREQSERFGTRIYSETVDS 422
           +LFEG+MAN IA GGQLTTTTDVENFPGFPEGILG ++  +FR+QSERFGT I++ETV+ 
Sbjct: 85  LLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGIDIVEKFRKQSERFGTTIFTETVNK 144

Query: 423 IDTSRRPFTVRTADKEVTADSLIIATGAVAR 515
           +D S +PF + T  + V ADS+II+TGAVA+
Sbjct: 145 VDFSSKPFKLFTDSRTVLADSVIISTGAVAK 175

>pir||S44027 thioredoxin-disulfide reductase (EC 1.8.1.9) 2 [validated] -
           Arabidopsis thaliana
          Length = 333

 Score =  173 bits (439), Expect = 1e-42
 Identities = 82/122 (67%), Positives = 103/122 (84%)
 Frame = +3

Query: 150 VEKMHTKVCIIGSGPAAHTAAVYTARAELQPILFEGFMANGIAAGGQLTTTTDVENFPGF 329
           +E  +T++CI+GSGPAAHTAA+Y ARAEL+P+LFEG+MAN IA GGQLTTTTDVENFPGF
Sbjct: 4   LETHNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGF 63

Query: 330 PEGILGAELTTRFREQSERFGTRIYSETVDSIDTSRRPFTVRTADKEVTADSLIIATGAV 509
           PEGILG ELT +FR+QSERFGT I++ETV  +D S +PF + T  K + AD++I+A GAV
Sbjct: 64  PEGILGVELTDKFRKQSERFGTTIFTETVTKVDFSSKPFKLFTDSKAILADAVILAIGAV 123

Query: 510 AR 515
           A+
Sbjct: 124 AK 125



EST assemble image


clone accession position
1 HC025a07_r AV633771 1 505
2 LC080b03_r AV624607 31 517
3 MX203g05_r BP089250 62 407




Chlamydomonas reinhardtii
Kazusa DNA Research Institute