KCC001912A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001912A_C01 KCC001912A_c01
TTCACATGTACAGTTCGGCTCTTCAGGCAAACGCCTTCAGTCGCCAGCGATAGTTACCTG
TCGCGATACAGTCGACCGCGCCTTTGTCGTGCGACGCGCGCAGGCTCTACAAGGCTGCAT
CACACGTACTGTATCTGGTCCAAGTGGGCTGCTTGAAGGGTCGACAGGCTGGAGGAAGAG
ACAGCGGTCAATTGAGGGTTGTTTCGGGGAGAGGGCACCGTTGGAGCTGCGTCAGCTGAG
TCGAGAATGGCCGTCAGCGCAGGCGTCGCTTCGAGTAGCATGAGGCTTGCTTCACGCCCT
TCCGCAACCGCGGTGCCTCACCCGGCGCGCGCTTGCGGCTGTCGGAATGTGCTCGCGCCA
CTTCGGGTGGCGCAGATGCCTGCGCGGACCGCTGATGCGGCAGAGCAGAAGCGTGCTGCA
GCGGAAGTGATGGATGGCGAGGGCGCTGCGAATGCGGGCCCAGACTATTCCATTGTGCAG
CGCAACCTTGCGCTGGAGCTCGTCCGCGTCACAGAGGCCGCTGCGCTCGCGTCGGGGCGC
TGGTTTGGCAAGGGTGACAAGAACGCCGCTGACCAGGCCGCGGTGGACATGATGCGCAAG
GTGCTCAACAGCGTGGCCATGGACGGAGTGGTGGTTATTGGCGAGGGCGAGAAGGACGAG
GCGCCCATGCTGTACTGCGGCGAGCGCATCGGCGACGGCAGCATGTTCCCCAAGGTGGAC
ATAGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001912A_C01 KCC001912A_c01
         (725 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|ZP_00019436.1| hypothetical protein [Chloroflexus aurantiacus]    119  4e-26
ref|NP_600242.1| putative fructose-1,6-bisphosphatase/sedoheptul...   115  7e-25
ref|NP_824391.1| putative glycerol-inducible protein [Streptomyc...   115  9e-25
ref|NP_737685.1| putative fructose-1,6-bisphosphatase [Corynebac...   114  1e-24
ref|NP_629199.1| conserved hypothetical protein GlpX [Streptomyc...   113  3e-24

>ref|ZP_00019436.1| hypothetical protein [Chloroflexus aurantiacus]
          Length = 325

 Score =  119 bits (299), Expect = 4e-26
 Identities = 56/75 (74%), Positives = 66/75 (87%)
 Frame = +1

Query: 475 VQRNLALELVRVTEAAALASGRWFGKGDKNAADQAAVDMMRKVLNSVAMDGVVVIGEGEK 654
           ++RNL ++LVR TEAAAL SGRW G+GDKN+ADQAAVD MR  LNSV M+G+VVIGEGEK
Sbjct: 1   MERNLGMDLVRATEAAALRSGRWMGRGDKNSADQAAVDAMRMALNSVPMNGIVVIGEGEK 60

Query: 655 DEAPMLYCGERIGDG 699
           DEAPMLY GER+G+G
Sbjct: 61  DEAPMLYIGERVGNG 75

>ref|NP_600242.1| putative fructose-1,6-bisphosphatase/sedoheptulose
           1,7-bisphosphatase [Corynebacterium glutamicum ATCC
           13032]
          Length = 335

 Score =  115 bits (288), Expect = 7e-25
 Identities = 60/81 (74%), Positives = 67/81 (82%)
 Frame = +1

Query: 481 RNLALELVRVTEAAALASGRWFGKGDKNAADQAAVDMMRKVLNSVAMDGVVVIGEGEKDE 660
           RNLA+ELVRVTEAAALASGRW G+G KN  D AAVD MR+++NSV M GVVVIGEGEKDE
Sbjct: 11  RNLAMELVRVTEAAALASGRWVGRGMKNEGDGAAVDAMRQLINSVTMKGVVVIGEGEKDE 70

Query: 661 APMLYCGERIGDGSMFPKVDI 723
           APMLY GE +G G   P+VDI
Sbjct: 71  APMLYNGEEVGTG-FGPEVDI 90

>ref|NP_824391.1| putative glycerol-inducible protein [Streptomyces avermitilis
           MA-4680] gi|29606866|dbj|BAC70926.1| putative
           glycerol-inducible protein [Streptomyces avermitilis
           MA-4680]
          Length = 344

 Score =  115 bits (287), Expect = 9e-25
 Identities = 58/81 (71%), Positives = 71/81 (87%)
 Frame = +1

Query: 481 RNLALELVRVTEAAALASGRWFGKGDKNAADQAAVDMMRKVLNSVAMDGVVVIGEGEKDE 660
           RNLALELVRVTEAAA+A+GRW G+GDKN AD AAV  MR ++++V+M+GVVVIGEGEKDE
Sbjct: 20  RNLALELVRVTEAAAMAAGRWVGRGDKNGADGAAVRAMRTLVSTVSMNGVVVIGEGEKDE 79

Query: 661 APMLYCGERIGDGSMFPKVDI 723
           APML+ GER+GDG+  P+ DI
Sbjct: 80  APMLFNGERVGDGT-GPECDI 99

>ref|NP_737685.1| putative fructose-1,6-bisphosphatase [Corynebacterium efficiens
           YS-314] gi|23492913|dbj|BAC17885.1| putative
           fructose-1,6-bisphosphatase [Corynebacterium efficiens
           YS-314]
          Length = 387

 Score =  114 bits (286), Expect = 1e-24
 Identities = 72/154 (46%), Positives = 88/154 (56%)
 Frame = +1

Query: 262 GVASSSMRLASRPSATAVPHPARACGCRNVLAPLRVAQMPARTADAAEQKRAAAEVMDGE 441
           GV +  MR  + P  T V  P   C  R      ++  +  R  +A        E  D  
Sbjct: 9   GVPTPGMRSPAFP--TPVSRPGPGCSLRYRRYRQKIFNVFHRLQEAPTMNALHPEQPD-- 64

Query: 442 GAANAGPDYSIVQRNLALELVRVTEAAALASGRWFGKGDKNAADQAAVDMMRKVLNSVAM 621
                        RNLA+ELVRVTEAAALA+GRW G+G KN  D AAVD MR+++NSV+M
Sbjct: 65  -------------RNLAMELVRVTEAAALAAGRWVGRGMKNEGDGAAVDAMRQLINSVSM 111

Query: 622 DGVVVIGEGEKDEAPMLYCGERIGDGSMFPKVDI 723
            GV+VIGEGEKDEAPMLY GE +G G   P+VDI
Sbjct: 112 KGVIVIGEGEKDEAPMLYNGEEVGTG-FGPEVDI 144

>ref|NP_629199.1| conserved hypothetical protein GlpX [Streptomyces coelicolor A3(2)]
           gi|9967674|emb|CAC05892.1| conserved hypothetical
           protein GlpX [Streptomyces coelicolor A3(2)]
          Length = 343

 Score =  113 bits (283), Expect = 3e-24
 Identities = 54/74 (72%), Positives = 67/74 (89%)
 Frame = +1

Query: 481 RNLALELVRVTEAAALASGRWFGKGDKNAADQAAVDMMRKVLNSVAMDGVVVIGEGEKDE 660
           RNLA+ELVRVTEAAA+A+GRW G+GDKN AD AAV  MR ++++V+M+GVVVIGEGEKDE
Sbjct: 19  RNLAMELVRVTEAAAMAAGRWVGRGDKNGADGAAVRAMRTLVHTVSMNGVVVIGEGEKDE 78

Query: 661 APMLYCGERIGDGS 702
           APML+ GER+GDG+
Sbjct: 79  APMLFNGERVGDGT 92



EST assemble image


clone accession position
1 MXL080e11_r BP097739 1 377
2 HCL007a08_r AV639909 1 438
3 HC024d03_r AV633716 3 504
4 MXL084a09_r BP097951 9 380
5 HCL027b11_r AV641068 22 483
6 MXL050c01_r BP095965 26 503
7 HCL051d07_r AV642414 28 280
8 HCL030e12_r AV641255 258 696
9 MXL012d03_r BP093709 286 613
10 LCL050d11_r AV629018 361 725




Chlamydomonas reinhardtii
Kazusa DNA Research Institute