KCC001895A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001895A_C01 KCC001895A_c01
aggtgcaGCTTCAACAAAAATGAATGCTCAACATATGCCTACCCTGGCAACCTGGCTGCC
AAAATGAAGCTTGGAGTGTGGACTGATGAGTGCCAATGCTTGCTGTAGCCGTTCTACTGA
CCTGCCTGCTGTTGTGCCTGCTTGAGTGTCTGATTGTGCTGATGTGTCCTTGGTGCTGAG
TGATGTTACAATGGTGCTTACTGATTCTTGAATGAATCTGCTTGTGTTGTGCCGATGTGC
ATCAATGCCATGTGGnCGTCTCTGCACGACTTGAAACGCGATGTGGCTTGTTCCGTTAGC
ACCGAACTTGGCCTCTGCTGTTTGCTGATCTTTGCCTTGAATTGAnCCGCCACTGTGCTG
ACCCCATGGTGCGTTTCCCTGCTGTGCATTACTGTGCGCTGCnCAGTGACATGTGTGCTG
ATAGCTGCCCTG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001895A_C01 KCC001895A_c01
         (432 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_609052.1| CG11050-PA [Drosophila melanogaster] gi|2458226...    35  0.24
sp|Q9PTL2|SPY2_CHICK Sprouty homolog 2 (Spry-2) gi|5917716|gb|AA...    35  0.31
dbj|BAC87611.1| unnamed protein product [Homo sapiens]                 34  0.41
ref|NP_572893.1| CG15753-PA [Drosophila melanogaster] gi|7292887...    34  0.41
dbj|BAC86609.1| unnamed protein product [Homo sapiens]                 28  0.44

>ref|NP_609052.1| CG11050-PA [Drosophila melanogaster] gi|24582260|ref|NP_723193.1|
           CG11050-PB [Drosophila melanogaster]
           gi|24582262|ref|NP_723194.1| CG11050-PC [Drosophila
           melanogaster] gi|7297141|gb|AAF52408.1| CG11050-PA
           [Drosophila melanogaster] gi|22945780|gb|AAN10588.1|
           CG11050-PB [Drosophila melanogaster]
           gi|22945781|gb|AAN10589.1| CG11050-PC [Drosophila
           melanogaster]
          Length = 388

 Score = 35.0 bits (79), Expect = 0.24
 Identities = 30/118 (25%), Positives = 50/118 (41%), Gaps = 15/118 (12%)
 Frame = -1

Query: 420 QHTCHXAAHSNAQQGNAPWGQHSGGSIQGKDQQTAEAKFGANGTSH-IAFQVVQRRPHGI 244
           +H+       N+  G+     H+ G   G+ +   E+  G N TSH +A +++Q+R   I
Sbjct: 35  KHSSQAKFGDNSSHGSP---SHTDGRSHGESESDLESAHGQNFTSHHLARRILQQRSQDI 91

Query: 243 DAHRHNTSRFIQESVST-------------IVTSLSTKDTSAQ-SDTQAGTTAGRSVE 112
             H H  S   Q S  +              ++SL+ +   +Q SD    +T G  VE
Sbjct: 92  QRHIHTQSAKGQTSAKSSQQQQHQQTATKFAMSSLAAEPLQSQKSDEITASTGGGDVE 149

>sp|Q9PTL2|SPY2_CHICK Sprouty homolog 2 (Spry-2) gi|5917716|gb|AAD56005.1|AF176904_1
           sprouty 2 [Gallus gallus]
          Length = 313

 Score = 34.7 bits (78), Expect = 0.31
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
 Frame = -1

Query: 321 TAEAKFGANGTSHIAFQVVQRRPHGIDAHRH-NTSRFIQESVS---TIVTSLSTKDTSAQ 154
           T   + G       A Q    RPHG+  HRH    +  Q   S    +  S+ST  T ++
Sbjct: 60  TVAPRPGVKSAPRSASQPKSERPHGLPEHRHFGRVQHTQTHASPRAPLSRSISTVSTGSR 119

Query: 153 SDTQAGTTAGRSVERL 106
           S T+  T++  S +RL
Sbjct: 120 SSTRTSTSSNSSEQRL 135

>dbj|BAC87611.1| unnamed protein product [Homo sapiens]
          Length = 201

 Score = 34.3 bits (77), Expect = 0.41
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 123 CLLLCLLECLIVLMCPWC*VMLQWCLLILE*ICLC 227
           C+ LC+  C+ V +C W  V L  C+ +   +CLC
Sbjct: 130 CVCLCVCVCICVFVCVWVCVCLCVCVCLCVCLCLC 164

 Score = 33.5 bits (75), Expect = 0.69
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +3

Query: 99  LAVAVLLTCLLLCLLECLIVLMCPWC*VMLQWCLLILE*ICLC-CADVHQC 248
           L V ++  CL +CL  C+ V +C    V L  C+ +   +CLC C  V  C
Sbjct: 60  LCVCLVSVCLCVCLCVCVSVCLC----VCLHLCVCVCGFVCLCLCVCVCLC 106

 Score = 30.0 bits (66), Expect = 7.7
 Identities = 20/58 (34%), Positives = 28/58 (47%), Gaps = 2/58 (3%)
 Frame = +3

Query: 105 VAVLLTCLLLCLLECLIVLMCPWC*VMLQWCLLILE-*ICLC-CADVHQCHVXVSARL 272
           V V +   +LC+  C+ V +C    V +  CL +L   +CLC C  V  C   VS  L
Sbjct: 12  VCVCVCVCVLCVSVCVCVCLCVCVCVCVCLCLCVLSVSVCLCVCVSVCLCVCLVSVCL 69

>ref|NP_572893.1| CG15753-PA [Drosophila melanogaster] gi|7292887|gb|AAF48279.1|
           CG15753-PA [Drosophila melanogaster]
          Length = 458

 Score = 34.3 bits (77), Expect = 0.41
 Identities = 29/108 (26%), Positives = 43/108 (38%), Gaps = 1/108 (0%)
 Frame = -2

Query: 365 GVSTVAXQFKAKISKQQRPSSVLTEQATSRFKSCRDXHMALMHIGTTQADSFKNQ*APL* 186
           G   VA   +  + +QQ+   +  +++        + H    H G     S   Q   + 
Sbjct: 204 GSPAVATLTRRSMHQQQQHPQMPRQESMEM----EERHSGRSHYGGLLVTSTAKQPQEIC 259

Query: 185 HHSAPRTHQHNQTLKQAQQQAGQ*NGYSKHW-HSSVHTPSFILAARLP 45
           HH      QH Q  +Q QQQ  Q     +   H+  H PS  +AARLP
Sbjct: 260 HHHHQHQQQHQQQHQQQQQQQQQQQQQQQRMHHAHPHPPS--IAARLP 305

>dbj|BAC86609.1| unnamed protein product [Homo sapiens]
          Length = 210

 Score = 27.7 bits (60), Expect(2) = 0.44
 Identities = 15/53 (28%), Positives = 21/53 (39%), Gaps = 7/53 (13%)
 Frame = +1

Query: 289 CSVSTELGLC-------CLLIFALN*XATVLTPWCVSLLCITVRCXVTCVLIA 426
           C V     LC       C     ++    V T WCV ++C  V C   C++ A
Sbjct: 81  CMVMCTCALCVVCMHGVCTCALCMHGNVHVCTVWCVCMVCARVHC--VCIVCA 131

 Score = 25.4 bits (54), Expect(2) = 0.44
 Identities = 11/38 (28%), Positives = 17/38 (43%), Gaps = 2/38 (5%)
 Frame = +3

Query: 135 CLLECLIVLMCPWC*VMLQWCLLILE*ICLC--CADVH 242
           C+  C +   C     +  WC+ +    C+C  CA VH
Sbjct: 30  CVHMCTVYAWCVHVCTVYAWCVHVCTVWCVCMVCAHVH 67



EST assemble image


clone accession position
1 HC019b05_r AV633298 1 167
2 LC082e08_r AV624775 8 362
3 MX227c04_r BP090668 9 434




Chlamydomonas reinhardtii
Kazusa DNA Research Institute