KCC001880A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001880A_C01 KCC001880A_c01
CCTTCACATAATTCACCCCTGGGTCTCTTTGAGACCCAAGCGCACAACTCCGCAACTGCC
CATTTCAGCTTCACAAAGCCGCAACAATGGCCGCTCCTCTCGGCTGACCAGCTGGACATT
GTGATCCCCACTATCCGGAACCTGGACTTCCTGGAGGAGTGGCGCCCCTTCTTCCAGCCC
TACCACCTGATCATCGTGCAGGACGGTGACCCGTACGACAGAAGATCGCTGTGCGCCGAG
GGCTTCAGCTATGAGCTCTACAACCGCAACGACATCGAGCGCATCCTGGGCGACAAGGCT
TGGTCCATCTCGTTCAAGGCACTCGGCCTGCCGTTGCTTCGGCTTCATGGTCTCTAAGAA
GAAGTACATCTACACCATCGACGATGACTGCTTCGTGGCCAAGGACCCCTCGGGCAAGCC
CATCAACGTCCTGGAGCAGCACATCAAGAACCTGCTGTCCCCCTCGACTCCCTTCTTCTT
CAACACCCTGTACGAACCCTACCGTGAGGGCACTGACTTCGTGCGCGGCTACCCCTTCAG
CCTGCGCGAGGGTGTCACCACGGCCACCTCGCACGGTCTGTGGATGAACATCCCCGACTA
CGACGCCCCCACCCAGATGGTGAAGCCCAAGGAGCGCAACACCCGCTTCGTGGACGCCGT
CATGACCATCCCCAAGGGTACGCTGTACCCCATGTGCGGCATGAACCTGGCGTTCGACCG
TGAGCTCATCGGTGCCGCTATGTACTTCGGCCTGATGGGTGAGGGCCAGCCCATTGGCCG
CTACGACGACATGTGGGCCGGCTGGTGCACCAAGGTCATCTGCGACCACCTGGGCGTGGG
CTGCAAGACCGGCCTGCCCTACGTGTGGCACAGCAAGGCCTCGAACCCCTTCACCAACCT
GCGCAAGGAGTACAAGGGCATCTTCTGGCAGGAGGAGATCATCCCCTTCTTCCAGAACGT
GACTCTCAG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001880A_C01 KCC001880A_c01
         (969 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|P80607|UPTG_MAIZE Alpha-1,4-glucan-protein synthase [UDP-form...   425  e-118
emb|CAC83750.1| reversibly glycosylated polypeptide [Gossypium h...   423  e-117
pir||T11577 type IIIa membrane protein cp-wap13 - cowpea gi|2218...   422  e-117
gb|AAG17438.1|AF294725_1 reversibly glycosylated polypeptide [Or...   422  e-117
emb|CAA77235.1| reversibly glycosylated polypeptide [Oryza sativ...   422  e-117

>sp|P80607|UPTG_MAIZE Alpha-1,4-glucan-protein synthase [UDP-forming]
           (UDP-glucose:protein transglucosylase) (UPTG)
           (Amylogenin) (Golgi associated protein se-wap41)
           gi|7489746|pir||T04331 golgi associated protein se-wap41
           - maize gi|1895084|gb|AAB49896.1| golgi associated
           protein se-wap41 [Zea mays]
          Length = 364

 Score =  425 bits (1093), Expect = e-118
 Identities = 194/227 (85%), Positives = 208/227 (91%), Gaps = 4/227 (1%)
 Frame = +2

Query: 299 LGPSRS----RHSACRCFGFMVSKKKYIYTIDDDCFVAKDPSGKPINVLEQHIKNLLSPS 466
           LGP  S    + SACRCFG+MVSKKKYIYTIDDDCFVAKDPSGK IN LEQHIKNLLSPS
Sbjct: 79  LGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLSPS 138

Query: 467 TPFFFNTLYEPYREGTDFVRGYPFSLREGVTTATSHGLWMNIPDYDAPTQMVKPKERNTR 646
           TPFFFNTLY+PYREG DFVRGYPFSLREG  TA SHGLW+NIPDYDAPTQ+VKPKERN R
Sbjct: 139 TPFFFNTLYDPYREGADFVRGYPFSLREGAHTAVSHGLWLNIPDYDAPTQLVKPKERNER 198

Query: 647 FVDAVMTIPKGTLYPMCGMNLAFDRELIGAAMYFGLMGEGQPIGRYDDMWAGWCTKVICD 826
           +VDAVMTIPKGTL+PMCGMNLAFDR+LIG AMYFGLMG+GQPIGRYDDMWAGWC KVICD
Sbjct: 199 YVDAVMTIPKGTLFPMCGMNLAFDRDLIGPAMYFGLMGDGQPIGRYDDMWAGWCVKVICD 258

Query: 827 HLGVGCKTGLPYVWHSKASNPFTNLRKEYKGIFWQEEIIPFFQNVTL 967
           HL +G KTGLPY+WHSKASNPF NL+KEYKGIFWQE+IIPFFQNVT+
Sbjct: 259 HLSLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEDIIPFFQNVTI 305

 Score =  110 bits (274), Expect = 5e-23
 Identities = 58/76 (76%), Positives = 60/76 (78%)
 Frame = +1

Query: 91  PLLSADQLDIVIPTIRNLDFLEEWRPFFQPYHLIIVQDGDPYDRRSLCAEGFSYELYNRN 270
           PLL  D+LDIVIPTIRNLDFLE WR FFQPYHLIIVQDGDP  +     EGF YELYNRN
Sbjct: 16  PLLK-DELDIVIPTIRNLDFLEMWRAFFQPYHLIIVQDGDP-TKTIKVPEGFDYELYNRN 73

Query: 271 DIERILGDKAWSISFK 318
           DI RILG KA  ISFK
Sbjct: 74  DINRILGPKASCISFK 89

>emb|CAC83750.1| reversibly glycosylated polypeptide [Gossypium hirsutum]
          Length = 359

 Score =  423 bits (1088), Expect = e-117
 Identities = 193/227 (85%), Positives = 209/227 (92%), Gaps = 4/227 (1%)
 Frame = +2

Query: 299 LGPSRS----RHSACRCFGFMVSKKKYIYTIDDDCFVAKDPSGKPINVLEQHIKNLLSPS 466
           LGP  S    + SACRCFG+MVSKKKYIYTIDDDCFVAKDPSGK IN LEQHI+NLLSPS
Sbjct: 71  LGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIQNLLSPS 130

Query: 467 TPFFFNTLYEPYREGTDFVRGYPFSLREGVTTATSHGLWMNIPDYDAPTQMVKPKERNTR 646
           TPFFFNTLY+PYR G DFVRGYPFSLREGVTTA SHGLW+NIPDYDAPTQ+VKP ERNTR
Sbjct: 131 TPFFFNTLYDPYRSGADFVRGYPFSLREGVTTAVSHGLWLNIPDYDAPTQLVKPLERNTR 190

Query: 647 FVDAVMTIPKGTLYPMCGMNLAFDRELIGAAMYFGLMGEGQPIGRYDDMWAGWCTKVICD 826
           +VDA+MTIPKGTL+PMCGMNLAF+RELIG AMYFGLMG+GQPIGRYDDMWAGWCTKVICD
Sbjct: 191 YVDAIMTIPKGTLFPMCGMNLAFNRELIGPAMYFGLMGDGQPIGRYDDMWAGWCTKVICD 250

Query: 827 HLGVGCKTGLPYVWHSKASNPFTNLRKEYKGIFWQEEIIPFFQNVTL 967
           HLG G KTGLPY+WHSKASNPF NL+KEYKGI+WQEE+IPFFQ+V L
Sbjct: 251 HLGWGVKTGLPYIWHSKASNPFVNLKKEYKGIYWQEELIPFFQSVAL 297

 Score =  113 bits (282), Expect = 6e-24
 Identities = 59/76 (77%), Positives = 61/76 (79%)
 Frame = +1

Query: 91  PLLSADQLDIVIPTIRNLDFLEEWRPFFQPYHLIIVQDGDPYDRRSLCAEGFSYELYNRN 270
           PLL  D+LDIVIPTIRNLDFLE WRPFFQPYHLIIVQDGDP  +     EGF YELYNRN
Sbjct: 8   PLLK-DELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDP-TKTIKVPEGFDYELYNRN 65

Query: 271 DIERILGDKAWSISFK 318
           DI RILG KA  ISFK
Sbjct: 66  DINRILGPKASCISFK 81

>pir||T11577 type IIIa membrane protein cp-wap13 - cowpea
           gi|2218152|gb|AAB61672.1| type IIIa membrane protein
           cp-wap13 [Vigna unguiculata]
          Length = 346

 Score =  422 bits (1085), Expect = e-117
 Identities = 192/227 (84%), Positives = 207/227 (90%), Gaps = 4/227 (1%)
 Frame = +2

Query: 299 LGPSRS----RHSACRCFGFMVSKKKYIYTIDDDCFVAKDPSGKPINVLEQHIKNLLSPS 466
           LGP  S    + SACRCF +MVSKKKYIYTIDDDCFVAKDPSGK IN LEQHIKNLL P+
Sbjct: 43  LGPKASCISFKDSACRCFAYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLCPA 102

Query: 467 TPFFFNTLYEPYREGTDFVRGYPFSLREGVTTATSHGLWMNIPDYDAPTQMVKPKERNTR 646
           TPFFFNTLY+PYREG DFVRGYPFSLREG  TA SHGLW+NIPDYDAPTQ+VKP+ERNTR
Sbjct: 103 TPFFFNTLYDPYREGADFVRGYPFSLREGAPTAVSHGLWLNIPDYDAPTQLVKPRERNTR 162

Query: 647 FVDAVMTIPKGTLYPMCGMNLAFDRELIGAAMYFGLMGEGQPIGRYDDMWAGWCTKVICD 826
           +VDAV+TIPKGTL+PMCGMNLAFDRELIG AMYFGLMG+GQPIGRYDDMWAGWC KVICD
Sbjct: 163 YVDAVLTIPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCVKVICD 222

Query: 827 HLGVGCKTGLPYVWHSKASNPFTNLRKEYKGIFWQEEIIPFFQNVTL 967
           HLG+G KTGLPY+WHSKASNPF NL+KEYKGIFWQEEIIPFFQ+ TL
Sbjct: 223 HLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEEIIPFFQSATL 269

 Score = 77.4 bits (189), Expect = 3e-13
 Identities = 38/53 (71%), Positives = 40/53 (74%)
 Frame = +1

Query: 160 WRPFFQPYHLIIVQDGDPYDRRSLCAEGFSYELYNRNDIERILGDKAWSISFK 318
           WRPFF+ YHLIIVQDGDP  +     EGF YELYNRNDI RILG KA  ISFK
Sbjct: 2   WRPFFEQYHLIIVQDGDP-SKTIKVPEGFDYELYNRNDINRILGPKASCISFK 53

>gb|AAG17438.1|AF294725_1 reversibly glycosylated polypeptide [Oryza sativa]
           gi|22795245|gb|AAN08217.1| reversibly glycosylated
           polypeptide [Oryza sativa (japonica cultivar-group)]
          Length = 364

 Score =  422 bits (1085), Expect = e-117
 Identities = 190/227 (83%), Positives = 208/227 (90%), Gaps = 4/227 (1%)
 Frame = +2

Query: 299 LGPSRS----RHSACRCFGFMVSKKKYIYTIDDDCFVAKDPSGKPINVLEQHIKNLLSPS 466
           LGP  S    + SACRCFG+MVSKKKY++TIDDDCFVAKDPSGK IN LEQHIKNLLSPS
Sbjct: 79  LGPKASCISFKDSACRCFGYMVSKKKYVFTIDDDCFVAKDPSGKDINALEQHIKNLLSPS 138

Query: 467 TPFFFNTLYEPYREGTDFVRGYPFSLREGVTTATSHGLWMNIPDYDAPTQMVKPKERNTR 646
           TPFFFNTLY+PYREG DFVRGYPFSLREG  TA SHGLW+NIPDYDAPTQMVKP+ERN+R
Sbjct: 139 TPFFFNTLYDPYREGADFVRGYPFSLREGAKTAVSHGLWLNIPDYDAPTQMVKPRERNSR 198

Query: 647 FVDAVMTIPKGTLYPMCGMNLAFDRELIGAAMYFGLMGEGQPIGRYDDMWAGWCTKVICD 826
           +VDAVMT+PKGTL+PMCGMNLAFDR+LIG AMYFGLMG+GQPIGRYDDMWAGWC KVICD
Sbjct: 199 YVDAVMTVPKGTLFPMCGMNLAFDRDLIGPAMYFGLMGDGQPIGRYDDMWAGWCMKVICD 258

Query: 827 HLGVGCKTGLPYVWHSKASNPFTNLRKEYKGIFWQEEIIPFFQNVTL 967
           HL +G KTGLPY+WHSKASNPF NL+KEYKGIFWQE+IIPFFQN T+
Sbjct: 259 HLSLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEDIIPFFQNATI 305

 Score =  113 bits (282), Expect = 6e-24
 Identities = 59/76 (77%), Positives = 61/76 (79%)
 Frame = +1

Query: 91  PLLSADQLDIVIPTIRNLDFLEEWRPFFQPYHLIIVQDGDPYDRRSLCAEGFSYELYNRN 270
           PLL  D+LDIVIPTIRNLDFLE WRPFFQPYHLIIVQDGDP  +     EGF YELYNRN
Sbjct: 16  PLLK-DELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDP-TKTIRVPEGFDYELYNRN 73

Query: 271 DIERILGDKAWSISFK 318
           DI RILG KA  ISFK
Sbjct: 74  DINRILGPKASCISFK 89

>emb|CAA77235.1| reversibly glycosylated polypeptide [Oryza sativa (indica
           cultivar-group)]
          Length = 364

 Score =  422 bits (1085), Expect = e-117
 Identities = 190/227 (83%), Positives = 208/227 (90%), Gaps = 4/227 (1%)
 Frame = +2

Query: 299 LGPSRS----RHSACRCFGFMVSKKKYIYTIDDDCFVAKDPSGKPINVLEQHIKNLLSPS 466
           LGP  S    + SACRCFG+MVSKKKY++TIDDDCFVAKDPSGK IN LEQHIKNLLSPS
Sbjct: 79  LGPKASCISFKDSACRCFGYMVSKKKYVFTIDDDCFVAKDPSGKDINALEQHIKNLLSPS 138

Query: 467 TPFFFNTLYEPYREGTDFVRGYPFSLREGVTTATSHGLWMNIPDYDAPTQMVKPKERNTR 646
           TPFFFNTLY+PYREG DFVRGYPFSLREG  TA SHGLW+NIPDYDAPTQMVKP+ERN+R
Sbjct: 139 TPFFFNTLYDPYREGADFVRGYPFSLREGAKTAVSHGLWLNIPDYDAPTQMVKPRERNSR 198

Query: 647 FVDAVMTIPKGTLYPMCGMNLAFDRELIGAAMYFGLMGEGQPIGRYDDMWAGWCTKVICD 826
           +VDAVMT+PKGTL+PMCGMNLAFDR+LIG AMYFGLMG+GQPIGRYDDMWAGWC KVICD
Sbjct: 199 YVDAVMTVPKGTLFPMCGMNLAFDRDLIGPAMYFGLMGDGQPIGRYDDMWAGWCMKVICD 258

Query: 827 HLGVGCKTGLPYVWHSKASNPFTNLRKEYKGIFWQEEIIPFFQNVTL 967
           HL +G KTGLPY+WHSKASNPF NL+KEYKGIFWQE+IIPFFQN T+
Sbjct: 259 HLSLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEDIIPFFQNATI 305

 Score =  113 bits (282), Expect = 6e-24
 Identities = 59/76 (77%), Positives = 61/76 (79%)
 Frame = +1

Query: 91  PLLSADQLDIVIPTIRNLDFLEEWRPFFQPYHLIIVQDGDPYDRRSLCAEGFSYELYNRN 270
           PLL  D+LDIVIPTIRNLDFLE WRPFFQPYHLIIVQDGDP  +     EGF YELYNRN
Sbjct: 16  PLLK-DELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDP-TKTIRVPEGFDYELYNRN 73

Query: 271 DIERILGDKAWSISFK 318
           DI RILG KA  ISFK
Sbjct: 74  DINRILGPKASCISFK 89



EST assemble image


clone accession position
1 MX237g01_r BP091367 1 430
2 LC050c01_r AV622475 70 619
3 LCL091f06_r AV631299 73 426
4 HC029e11_r AV634124 81 661
5 LC030e02_r AV634124 91 629
6 HC029e04_r AV634118 91 632
7 MX052e08_r BP088137 97 486
8 LC039f08_r AV621688 98 532
9 LC047f04_r AV622018 98 447
10 MX046a12_r BP087899 102 220
11 LCL083e11_r AV630740 104 596
12 MX234e04_r BP091147 104 577
13 MX020c09_r BP086920 105 369
14 MX054b12_r BP088214 106 504
15 MX021c08_r BP086953 106 647
16 HC096g02_r AV639237 106 472
17 MX221b10_r BP090261 107 457
18 HC077a03_r AV637748 108 584
19 MX052g09_r BP088149 108 507
20 HC071a12_r AV637281 108 586
21 MX257b06_r BP092642 109 653
22 HC016g05_r AV633101 113 616
23 MX245c06_r BP091853 114 679
24 MX202e08_r BP089190 115 597
25 MX216d12_r BP089952 117 568
26 MX251e05_r BP092243 117 679
27 HC065c06_r AV636861 117 675
28 HC100c12_r AV639512 119 492
29 MX212g12_r BP089717 136 434
30 LC047e08_r AV622069 205 710
31 MX257e12_r BP092674 207 743
32 MX221g01_r BP090297 357 785
33 LC047a11_r AV622022 391 911
34 MX222a08_r BP090318 484 890
35 MXL021g12_r BP094355 551 859
36 LC048d07_r AV622343 594 1093
37 LC037e06_r AV621541 649 1121




Chlamydomonas reinhardtii
Kazusa DNA Research Institute