KCC001869A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001869A_C01 KCC001869A_c01
gaactgcaCTTAACTAGAGTCAAGCAAGCTCACAAGTTTCGTTGTATGTGGGCGGTCCGG
AAGAGCGGGGCTGCGAACCTAAAAATGACTATTAGCAAGGAGGAAAATGCGGAGACTCAA
ATCCTCATGCCTAAGCCGTCGCTCGGCAGCAACAACGGCTCGGCGATGGGCAAGCACATT
TTCGGCTTGCCTTCGGTGCTCGTGGCTGGTCTCTGCTACTGCGCGGCATCCGGCTCAATG
GTGTTGCTAAACAAGCACGCGCTCGCATCATTCGGCTTCGGTTCTCCCACTGCGCTGCTG
TGCTTCCAATGTGCGCTGGCGGCCATCCTGGTGAAACTTTGCGAGCTGGTTGGGTTTGTC
AAGCTGCAACCCCTGAAGCCGGACCTGGTAGCCGTTTGGTTCCCTGTGAACCTCATCTTC
GTAnGGATGATCGGGACTTCTTTCTACGCACTCAAAGAGGTCGGCGTGGGCATGGTGACC
GTGT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001869A_C01 KCC001869A_c01
         (484 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAK82435.1|AC091247_2 putative lipophosphoglycan biosynthetic...    89  3e-17
emb|CAC69066.1| GDP-Mannose transporter [Arabidopsis thaliana]         86  3e-16
ref|NP_565357.1| vanadate resistance protein -related [Arabidops...    86  3e-16
ref|NP_849952.1| vanadate resistance protein -related [Arabidops...    86  3e-16
ref|NP_172209.1| hypothetical protein [Arabidopsis thaliana]           80  1e-14

>gb|AAK82435.1|AC091247_2 putative lipophosphoglycan biosynthetic [Oryza sativa]
          Length = 368

 Score = 89.0 bits (219), Expect = 3e-17
 Identities = 41/95 (43%), Positives = 64/95 (67%)
 Frame = +1

Query: 199 LVAGLCYCAASGSMVLLNKHALASFGFGSPTALLCFQCALAAILVKLCELVGFVKLQPLK 378
           L++G+CYC AS SM+LLNK  L+++ F +  +L+ +Q  ++ I++ + EL G +  + L 
Sbjct: 79  LLSGICYCIASCSMILLNKVVLSNYNFNAGISLMLYQNLISVIILLVLELFGVISTEKLT 138

Query: 379 PDLVAVWFPVNLIFVXMIGTSFYALKEVGVGMVTV 483
             L+ VW PVNLIFV M+ T  Y+LK + V MVT+
Sbjct: 139 WKLIKVWIPVNLIFVGMLVTGMYSLKYINVAMVTI 173

>emb|CAC69066.1| GDP-Mannose transporter [Arabidopsis thaliana]
          Length = 333

 Score = 85.5 bits (210), Expect = 3e-16
 Identities = 42/95 (44%), Positives = 64/95 (67%)
 Frame = +1

Query: 199 LVAGLCYCAASGSMVLLNKHALASFGFGSPTALLCFQCALAAILVKLCELVGFVKLQPLK 378
           L++GL YC +S SM+L+NK  L+S+ F +   L+ +Q  ++ I+V    L+G +  +PL 
Sbjct: 34  LLSGLAYCISSCSMILVNKFVLSSYNFNAGIFLMLYQNFVSVIIVVGLSLMGLITTEPLT 93

Query: 379 PDLVAVWFPVNLIFVXMIGTSFYALKEVGVGMVTV 483
             L+ VWFPVN+IFV M+ TS ++LK + V MVTV
Sbjct: 94  LRLMKVWFPVNVIFVGMLITSMFSLKYINVAMVTV 128

>ref|NP_565357.1| vanadate resistance protein -related [Arabidopsis thaliana]
           gi|26006780|sp|Q941R4|GON1_ARATH GDP-mannose transporter
           gi|20198047|gb|AAD22687.2| putative vanadate resistance
           protein [Arabidopsis thaliana]
          Length = 333

 Score = 85.5 bits (210), Expect = 3e-16
 Identities = 42/95 (44%), Positives = 64/95 (67%)
 Frame = +1

Query: 199 LVAGLCYCAASGSMVLLNKHALASFGFGSPTALLCFQCALAAILVKLCELVGFVKLQPLK 378
           L++GL YC +S SM+L+NK  L+S+ F +   L+ +Q  ++ I+V    L+G +  +PL 
Sbjct: 34  LLSGLAYCISSCSMILVNKFVLSSYNFNAGIFLMLYQNFVSVIIVVGLSLMGLITTEPLT 93

Query: 379 PDLVAVWFPVNLIFVXMIGTSFYALKEVGVGMVTV 483
             L+ VWFPVN+IFV M+ TS ++LK + V MVTV
Sbjct: 94  LRLMKVWFPVNVIFVGMLITSMFSLKYINVAMVTV 128

>ref|NP_849952.1| vanadate resistance protein -related [Arabidopsis thaliana]
           gi|25411503|pir||E84509 probable vanadate resistance
           protein [imported] - Arabidopsis thaliana
          Length = 284

 Score = 85.5 bits (210), Expect = 3e-16
 Identities = 42/95 (44%), Positives = 64/95 (67%)
 Frame = +1

Query: 199 LVAGLCYCAASGSMVLLNKHALASFGFGSPTALLCFQCALAAILVKLCELVGFVKLQPLK 378
           L++GL YC +S SM+L+NK  L+S+ F +   L+ +Q  ++ I+V    L+G +  +PL 
Sbjct: 34  LLSGLAYCISSCSMILVNKFVLSSYNFNAGIFLMLYQNFVSVIIVVGLSLMGLITTEPLT 93

Query: 379 PDLVAVWFPVNLIFVXMIGTSFYALKEVGVGMVTV 483
             L+ VWFPVN+IFV M+ TS ++LK + V MVTV
Sbjct: 94  LRLMKVWFPVNVIFVGMLITSMFSLKYINVAMVTV 128

>ref|NP_172209.1| hypothetical protein [Arabidopsis thaliana]
          Length = 359

 Score = 80.5 bits (197), Expect = 1e-14
 Identities = 36/95 (37%), Positives = 62/95 (64%)
 Frame = +1

Query: 199 LVAGLCYCAASGSMVLLNKHALASFGFGSPTALLCFQCALAAILVKLCELVGFVKLQPLK 378
           LV+G  YC +S SM++LNK  L+S+ F +  +L+ +Q  ++ ++V + ++ G V ++   
Sbjct: 92  LVSGAAYCISSCSMIILNKIVLSSYNFNAGVSLMLYQNLISCLVVAVLDISGVVSVEKFN 151

Query: 379 PDLVAVWFPVNLIFVXMIGTSFYALKEVGVGMVTV 483
             L+ VW PVN+IFV M+ +  Y+LK + V MVT+
Sbjct: 152 WKLIRVWMPVNVIFVGMLVSGMYSLKYINVAMVTI 186



EST assemble image


clone accession position
1 HC012h09_r AV632812 1 486
2 MX044h10_r BP087852 9 172




Chlamydomonas reinhardtii
Kazusa DNA Research Institute