KCC001842A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001842A_C01 KCC001842A_c01
gaagcatacaaaaatgaatTCCTCGGTGCTTAGTGTGCGCCAGGTGGGGCGCCAGGCACG
CCCTTTCACCGTGCAGCCGCCCCGTCGCTGCTCCGTCATTCGCCACAGCCAGGCTGGTGG
CGATGTTCGCGGTAGCAAGATGGAGAAGGGAATGTTCGGCGAGAACTTCGGTGCTCGCGA
CCCCTTCGCTGGCGAGATTGAGACAAACTTCGGCGAGAAAGTGCTGGGGAACTATAACAC
GGAGCACCTTATCAAGCCCCCGGACACCATCAAGAGCGTGATGGGCTTGTCTGCGCGCAA
ATGCCAGGATAACGTGGCGACCCTGAAGGTGCTGTCGGAGGAGCAGCGCGAGCTGCTTCG
CAACCAGGTGCCGGGCTGGAAGGTTGCTCAGGGCGCTGAGGGGCGACCCTGCGTCCAGCA
GTCCTGGACCCTGAAGGACGAGCCCTCGGCTGTGGCCCTGGCGGCCATGGTGGCCAATGT
GGTCTCGGATGAGGGCACAGCGAGAGCC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001842A_C01 KCC001842A_c01
         (508 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAM66965.1| unknown [Arabidopsis thaliana]                          67  1e-10
ref|NP_199924.1| expressed protein [Arabidopsis thaliana] gi|884...    66  2e-10
sp|Q9FPQ6|GP1_CHLRE Vegetative cell wall protein gp1 precursor (...    47  1e-04
gb|AAK94670.1| subtilisin-like protein [Toxoplasma gondii]             47  1e-04
ref|NP_639771.1| putative DNA-binding protein [Streptomyces coel...    47  2e-04

>gb|AAM66965.1| unknown [Arabidopsis thaliana]
          Length = 220

 Score = 67.4 bits (163), Expect = 1e-10
 Identities = 52/164 (31%), Positives = 81/164 (48%), Gaps = 3/164 (1%)
 Frame = +2

Query: 14  MNSSVLSVRQVGRQA-RPFTVQPPRRCSVIRHSQAGG--DVRGSKMEKGMFGENFGARDP 184
           +++S L +RQ  R   + F + PP    V R+++  G   V  S + +   G+ FGARDP
Sbjct: 12  ISASSLLLRQPSRSILKVFGLLPP----VSRNNRKLGRLTVTRSNLAQDFLGD-FGARDP 66

Query: 185 FAGEIETNFGEKVLGNYNTEHLIKPPDTIKSVMGLSARKCQDNVATLKVLSEEQRELLRN 364
           +  EI + FG+KVLG  +TEH I  P+   SV+ LS  +C    ++   LS +    L +
Sbjct: 67  YPEEIASQFGDKVLGCQSTEHKILIPNA--SVLSLSQLQCSPVSSSQPPLSGDDARTLLH 124

Query: 365 QVPGWKVAQGAEGRPCVQQSWTLKDEPSAVALAAMVANVVSDEG 496
           +V GW +     G   ++  W +KD    V L   +  V    G
Sbjct: 125 KVLGWSIVDNEAGGLKIRCMWKVKDFGCGVELINRIHKVAEASG 168

>ref|NP_199924.1| expressed protein [Arabidopsis thaliana] gi|8843847|dbj|BAA97373.1|
           gene_id:MWD22.5~similar to unknown protein~sp|P43335
           [Arabidopsis thaliana] gi|15529258|gb|AAK97723.1|
           AT5g51110/MWD22_5 [Arabidopsis thaliana]
           gi|23505809|gb|AAN28764.1| At5g51110/MWD22_5
           [Arabidopsis thaliana]
          Length = 220

 Score = 66.2 bits (160), Expect = 2e-10
 Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 3/164 (1%)
 Frame = +2

Query: 14  MNSSVLSVRQVGRQA-RPFTVQPPRRCSVIRHSQAGG--DVRGSKMEKGMFGENFGARDP 184
           +++S L +RQ  R   + F + PP    V R+++  G   V  S + +   G+ FGARDP
Sbjct: 12  ISASSLLLRQPSRSILKVFGLLPP----VSRNNRKLGRLTVTRSNLAQDFLGD-FGARDP 66

Query: 185 FAGEIETNFGEKVLGNYNTEHLIKPPDTIKSVMGLSARKCQDNVATLKVLSEEQRELLRN 364
           +  EI + FG+KVLG  +TEH I  P+   SV+ LS  +C    ++   LS +    L +
Sbjct: 67  YPEEIASQFGDKVLGCQSTEHKILIPNA--SVLSLSQLQCSPVSSSQPPLSGDDARTLLH 124

Query: 365 QVPGWKVAQGAEGRPCVQQSWTLKDEPSAVALAAMVANVVSDEG 496
           +V GW +     G   ++  W ++D    V L   +  V    G
Sbjct: 125 KVLGWSIVDNEAGGLKIRCMWKVRDFGCGVELINRIHKVAEASG 168

>sp|Q9FPQ6|GP1_CHLRE Vegetative cell wall protein gp1 precursor (Hydroxyproline-rich
           glycoprotein 1) gi|12018147|gb|AAG45420.1|AF309494_1
           vegetative cell wall protein gp1 [Chlamydomonas
           reinhardtii]
          Length = 555

 Score = 47.4 bits (111), Expect = 1e-04
 Identities = 26/63 (41%), Positives = 28/63 (44%)
 Frame = -3

Query: 494 PHPRPHWPPWPPGPQPRARPSGSRTAGRRVAPQRPEQPSSPAPGCEAARAAPPTAPSGSP 315
           P P+P  PP PP P P   P     A   + P  P  P SPAP        PPT PS SP
Sbjct: 257 PSPKPPAPPPPPSPPPPPPPRPPFPANTPMPPSPPSPPPSPAP------PTPPTPPSPSP 310

Query: 314 RYP 306
             P
Sbjct: 311 PSP 313

 Score = 42.7 bits (99), Expect = 0.003
 Identities = 27/72 (37%), Positives = 31/72 (42%)
 Frame = -3

Query: 494 PHPRPHWPPWPPGPQPRARPSGSRTAGRRVAPQRPEQPSSPAPGCEAARAAPPTAPSGSP 315
           P P    PP PP P P + P+    A    AP  P  PS   P       APP+ PS +P
Sbjct: 68  PGPPSPAPPSPPSPAPPS-PAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPPSPAP 126

Query: 314 RYPGICAQTSPS 279
             P   A  SPS
Sbjct: 127 PSPSPPAPPSPS 138

 Score = 42.4 bits (98), Expect = 0.003
 Identities = 29/74 (39%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
 Frame = -3

Query: 494 PHPRPHWPPWP--PGPQPRARPSGSRTAGRRVAPQRPEQPSSPAPGCEAARAAPPTAPSG 321
           P P P  PP P  P P P A PS S  +    AP  P  P+ P+P       +PP  PS 
Sbjct: 114 PSPAPPSPPSPAPPSPSPPAPPSPSPPSP---APPLPPSPAPPSP-------SPPVPPSP 163

Query: 320 SPRYPGICAQTSPS 279
           SP  P   A  SP+
Sbjct: 164 SPPVPPSPAPPSPT 177

 Score = 42.4 bits (98), Expect = 0.003
 Identities = 27/73 (36%), Positives = 32/73 (42%), Gaps = 2/73 (2%)
 Frame = -3

Query: 494 PHPRPHWPPWP--PGPQPRARPSGSRTAGRRVAPQRPEQPSSPAPGCEAARAAPPTAPSG 321
           P P P  PP P  P P P   PS +  +     P  P  PS P+P       APP+ PS 
Sbjct: 179 PSPSPPVPPSPAPPSPAPPVPPSPAPPSPAPPVPPSPAPPSPPSP-------APPSPPSP 231

Query: 320 SPRYPGICAQTSP 282
           +P  P   A  SP
Sbjct: 232 APPSPSPPAPPSP 244

 Score = 40.8 bits (94), Expect = 0.010
 Identities = 29/79 (36%), Positives = 34/79 (42%), Gaps = 8/79 (10%)
 Frame = -3

Query: 494 PHPRPHWPPWPPGPQPRARPSGSRTAGRRVAPQRPEQPS----SPAPGCEAARA----AP 339
           P P    PP PP P P   PS +  +    +P  P  PS    SPAP    + A    AP
Sbjct: 150 PAPPSPSPPVPPSPSPPVPPSPAPPSPTPPSPSPPVPPSPAPPSPAPPVPPSPAPPSPAP 209

Query: 338 PTAPSGSPRYPGICAQTSP 282
           P  PS +P  P   A  SP
Sbjct: 210 PVPPSPAPPSPPSPAPPSP 228

 Score = 40.4 bits (93), Expect = 0.013
 Identities = 23/72 (31%), Positives = 28/72 (37%)
 Frame = -3

Query: 494 PHPRPHWPPWPPGPQPRARPSGSRTAGRRVAPQRPEQPSSPAPGCEAARAAPPTAPSGSP 315
           P P P  PP PP P     P    +     AP  P  P SP+P      +  P  PS +P
Sbjct: 268 PSPPPPPPPRPPFPANTPMPPSPPSPPPSPAPPTPPTPPSPSPPSPVPPSPAPVPPSPAP 327

Query: 314 RYPGICAQTSPS 279
             P      SP+
Sbjct: 328 PSPAPSPPPSPA 339

 Score = 39.7 bits (91), Expect = 0.022
 Identities = 24/71 (33%), Positives = 31/71 (42%)
 Frame = -3

Query: 494 PHPRPHWPPWPPGPQPRARPSGSRTAGRRVAPQRPEQPSSPAPGCEAARAAPPTAPSGSP 315
           P P    PP PP P P + PS +  +    AP  P  P+ P+P       APP+    SP
Sbjct: 202 PAPPSPAPPVPPSPAPPSPPSPAPPSPPSPAPPSPSPPAPPSP--VPPSPAPPSPAPPSP 259

Query: 314 RYPGICAQTSP 282
           + P      SP
Sbjct: 260 KPPAPPPPPSP 270

 Score = 39.3 bits (90), Expect = 0.028
 Identities = 25/74 (33%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
 Frame = -3

Query: 494 PHPRPHWPPWP--PGPQPRARPSGSRTAGRRVAPQRPEQPSSPAPGCEAARAAPPTAPSG 321
           P P P  PP P  P P P   PS +  +    AP  P  P+ P+P       +PP  PS 
Sbjct: 192 PSPAPPVPPSPAPPSPAPPVPPSPAPPSPPSPAPPSPPSPAPPSP-------SPPAPPSP 244

Query: 320 SPRYPGICAQTSPS 279
            P  P   +   PS
Sbjct: 245 VPPSPAPPSPAPPS 258

 Score = 38.9 bits (89), Expect = 0.037
 Identities = 28/76 (36%), Positives = 32/76 (41%), Gaps = 4/76 (5%)
 Frame = -3

Query: 494 PHPRPHWP----PWPPGPQPRARPSGSRTAGRRVAPQRPEQPSSPAPGCEAARAAPPTAP 327
           P P P  P    P PP P P + PS    A    +P  P  PS P+P       APP  P
Sbjct: 99  PSPAPPSPAPPSPAPPSPAPPSPPS---PAPPSPSPPAPPSPSPPSP-------APPLPP 148

Query: 326 SGSPRYPGICAQTSPS 279
           S +P  P      SPS
Sbjct: 149 SPAPPSPSPPVPPSPS 164

 Score = 38.5 bits (88), Expect = 0.049
 Identities = 24/63 (38%), Positives = 28/63 (44%)
 Frame = -3

Query: 494 PHPRPHWPPWPPGPQPRARPSGSRTAGRRVAPQRPEQPSSPAPGCEAARAAPPTAPSGSP 315
           P P    PP PP P P + PS +  +    AP  P  P SPAP   A  +  P AP   P
Sbjct: 210 PVPPSPAPPSPPSPAPPSPPSPAPPSPSPPAPPSP-VPPSPAPPSPAPPSPKPPAPPPPP 268

Query: 314 RYP 306
             P
Sbjct: 269 SPP 271

 Score = 38.5 bits (88), Expect = 0.049
 Identities = 31/79 (39%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
 Frame = -3

Query: 494 PHPRPHWP----PWPPGPQPRARPSGSRTAGRRVAPQRPEQPS--SPAPGCEAARAAP-P 336
           P P P  P    P PP P P + P+    A    AP  P  PS  SPAP   +  A P P
Sbjct: 79  PSPAPPSPAPPSPAPPSPAPPS-PAPPSPAPPSPAPPSPAPPSPPSPAPPSPSPPAPPSP 137

Query: 335 TAPSGSPRYPGICAQTSPS 279
           + PS +P  P   A  SPS
Sbjct: 138 SPPSPAPPLPPSPAPPSPS 156

 Score = 38.5 bits (88), Expect = 0.049
 Identities = 26/74 (35%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
 Frame = -3

Query: 494 PHPRPHWPPWP--PGPQPRARPSGSRTAGRRVAPQRPEQPSSPAPGCEAARAAPPTAPSG 321
           P P P  PP P  P P P   PS +  +     P  P  P  P+P         PT PS 
Sbjct: 127 PSPSPPAPPSPSPPSPAPPLPPSPAPPSPSPPVPPSPSPPVPPSPA-----PPSPTPPSP 181

Query: 320 SPRYPGICAQTSPS 279
           SP  P   A  SP+
Sbjct: 182 SPPVPPSPAPPSPA 195

 Score = 37.4 bits (85), Expect = 0.11
 Identities = 28/74 (37%), Positives = 29/74 (38%)
 Frame = -3

Query: 494 PHPRPHWPPWPPGPQPRARPSGSRTAGRRVAPQRPEQPSSPAPGCEAARAAPPTAPSGSP 315
           P P P  PP PP P P   PS        V P     P SPAP       AP   PS +P
Sbjct: 295 PSPAPPTPPTPPSPSP---PSP-------VPPSPAPVPPSPAP----PSPAPSPPPSPAP 340

Query: 314 RYPGICAQTSPSRS 273
             P      SPS S
Sbjct: 341 PTPSPSPSPSPSPS 354

 Score = 37.4 bits (85), Expect = 0.11
 Identities = 24/72 (33%), Positives = 30/72 (41%)
 Frame = -3

Query: 494 PHPRPHWPPWPPGPQPRARPSGSRTAGRRVAPQRPEQPSSPAPGCEAARAAPPTAPSGSP 315
           P P    PP PP P P   PS S       +P  P  P+ P+P       +PP  PS +P
Sbjct: 137 PSPPSPAPPLPPSPAP---PSPSPPVPPSPSPPVPPSPAPPSP--TPPSPSPPVPPSPAP 191

Query: 314 RYPGICAQTSPS 279
             P      SP+
Sbjct: 192 PSPAPPVPPSPA 203

 Score = 37.0 bits (84), Expect = 0.14
 Identities = 31/93 (33%), Positives = 33/93 (35%), Gaps = 2/93 (2%)
 Frame = -3

Query: 494 PHPRPHWPPWP--PGPQPRARPSGSRTAGRRVAPQRPEQPSSPAPGCEAARAAPPTAPSG 321
           P P P  PP P  P P P +    S        P  P  P  P P   A    PP+ PS 
Sbjct: 234 PSPSPPAPPSPVPPSPAPPSPAPPSPKPPAPPPPPSPPPPPPPRPPFPANTPMPPSPPSP 293

Query: 320 SPRYPGICAQTSPSRS*WCPGA**GAPCYSSPA 222
            P        T PS S   P     AP   SPA
Sbjct: 294 PPSPAPPTPPTPPSPSPPSPVPPSPAPVPPSPA 326

 Score = 37.0 bits (84), Expect = 0.14
 Identities = 25/69 (36%), Positives = 27/69 (38%), Gaps = 6/69 (8%)
 Frame = -3

Query: 494 PHPRPHWPPWP--PGPQPRARPSGSRTAGRRVAPQRPEQPS----SPAPGCEAARAAPPT 333
           P P P  PP P  P P   A PS S  A     P  P  PS    SP P       +PP 
Sbjct: 213 PSPAPPSPPSPAPPSPPSPAPPSPSPPAPPSPVPPSPAPPSPAPPSPKPPAPPPPPSPPP 272

Query: 332 APSGSPRYP 306
            P   P +P
Sbjct: 273 PPPPRPPFP 281

 Score = 36.6 bits (83), Expect = 0.18
 Identities = 26/74 (35%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
 Frame = -3

Query: 494 PHPRPHWPPWPPGPQPRARPSGSRTAGRRVAPQRPE--QPSSPAPGCEAARAAPPTAPSG 321
           P P P   P PP P P   PS +  +     P  P    P+ P P       APP+ PS 
Sbjct: 169 PSPAPP-SPTPPSPSPPVPPSPAPPSPAPPVPPSPAPPSPAPPVP----PSPAPPSPPSP 223

Query: 320 SPRYPGICAQTSPS 279
           +P  P   A  SPS
Sbjct: 224 APPSPPSPAPPSPS 237

 Score = 35.8 bits (81), Expect = 0.31
 Identities = 28/74 (37%), Positives = 32/74 (42%)
 Frame = -3

Query: 494 PHPRPHWPPWPPGPQPRARPSGSRTAGRRVAPQRPEQPSSPAPGCEAARAAPPTAPSGSP 315
           P P P  PP PP P   + PS    +   V P     P SPAP    + A P  +PS SP
Sbjct: 293 PPPSPA-PPTPPTPPSPSPPSPVPPSPAPVPPS--PAPPSPAPSPPPSPAPPTPSPSPSP 349

Query: 314 RYPGICAQTSPSRS 273
             P      SPS S
Sbjct: 350 S-PSPSPSPSPSPS 362

 Score = 35.4 bits (80), Expect = 0.41
 Identities = 25/76 (32%), Positives = 28/76 (35%), Gaps = 4/76 (5%)
 Frame = -3

Query: 494 PHPRPHWP----PWPPGPQPRARPSGSRTAGRRVAPQRPEQPSSPAPGCEAARAAPPTAP 327
           P P P  P    P PP P P + PS         AP  P  PS   P       APP+  
Sbjct: 56  PSPAPPSPAPPSPGPPSPAPPSPPSP--------APPSPAPPSPAPPSPAPPSPAPPSPA 107

Query: 326 SGSPRYPGICAQTSPS 279
             SP  P     + PS
Sbjct: 108 PPSPAPPSPAPPSPPS 123

 Score = 35.0 bits (79), Expect = 0.54
 Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 4/76 (5%)
 Frame = -3

Query: 494 PHPRPHWP----PWPPGPQPRARPSGSRTAGRRVAPQRPEQPSSPAPGCEAARAAPPTAP 327
           P P P  P    P PP P P + P+         AP  P  P+ P+P   +     P  P
Sbjct: 41  PSPAPPSPAPPSPAPPSPAPPS-PAPPSPGPPSPAPPSPPSPAPPSPAPPSPAPPSPAPP 99

Query: 326 SGSPRYPGICAQTSPS 279
           S +P  P   +   PS
Sbjct: 100 SPAPPSPAPPSPAPPS 115

 Score = 32.3 bits (72), Expect = 3.5
 Identities = 22/61 (36%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
 Frame = -3

Query: 494 PHPRPHWPPWPPGPQPRARPSGSRTAGRRVAPQRPEQPS-SPAPGCEAARAAPPTAPSGS 318
           P P P  PP P  P P   PS S +     +P     PS SP P       +P   PS S
Sbjct: 328 PSPAPSPPPSPAPPTPSPSPSPSPSPSPSPSPSPSPSPSPSPIP-------SPSPKPSPS 380

Query: 317 P 315
           P
Sbjct: 381 P 381

 Score = 31.6 bits (70), Expect = 5.9
 Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
 Frame = -3

Query: 497 CPHPRPHWP-PWPPGPQPR--ARPSGSRTAGRRVAPQRPEQPSSPAPGCEAARAAPPTAP 327
           CP P P  P P PP P P   A PS +  +    +P  P  P SPAP   A  +  P +P
Sbjct: 39  CP-PSPAPPSPAPPSPAPPSPAPPSPAPPSPGPPSPA-PPSPPSPAPPSPAPPSPAPPSP 96

Query: 326 SGSPRYPGICAQTSPS 279
           +     P   A  SP+
Sbjct: 97  APPSPAPPSPAPPSPA 112

>gb|AAK94670.1| subtilisin-like protein [Toxoplasma gondii]
          Length = 795

 Score = 47.0 bits (110), Expect = 1e-04
 Identities = 26/63 (41%), Positives = 28/63 (44%)
 Frame = -3

Query: 494 PHPRPHWPPWPPGPQPRARPSGSRTAGRRVAPQRPEQPSSPAPGCEAARAAPPTAPSGSP 315
           P P P  PP  P P PR  PS    + R   P     P  P P C A   +PPT P GSP
Sbjct: 598 PSPPPPTPPSAPSPSPRTPPSAPSPSPR--TPPCAPSPPPPTPPC-APSPSPPTPPPGSP 654

Query: 314 RYP 306
             P
Sbjct: 655 HKP 657

 Score = 47.0 bits (110), Expect = 1e-04
 Identities = 46/151 (30%), Positives = 56/151 (36%)
 Frame = -3

Query: 494 PHPRPHWPPWPPGPQPRARPSGSRTAGRRVAPQRPEQPSSPAPGCEAARAAPPTAPSGSP 315
           P P+PH     P PQP   PS         +P  P  PS+P+P    +   PP+APS SP
Sbjct: 581 PQPQPH-----PPPQPETPPSAP-------SPPPPTPPSAPSP----SPRTPPSAPSPSP 624

Query: 314 RYPGICAQTSPSRS*WCPGA**GAPCYSSPALSRRSLSQSRQRRGREHRSSRRTFPSPSC 135
           R P  CA + P  +          PC  SP       S      G  H+   +T   P  
Sbjct: 625 RTPP-CAPSPPPPT---------PPCAPSP-------SPPTPPPGSPHKPEPQTPVYPEV 667

Query: 134 YREHRHQPGCGE*RSSDGAAAR*KGVPGAPP 42
            R  R  P       S          PGAPP
Sbjct: 668 PRSTRSPPPSPPPTES---------APGAPP 689

 Score = 40.0 bits (92), Expect = 0.017
 Identities = 28/93 (30%), Positives = 36/93 (38%), Gaps = 3/93 (3%)
 Frame = -3

Query: 494 PHPRPHWPPW---PPGPQPRARPSGSRTAGRRVAPQRPEQPSSPAPGCEAARAAPPTAPS 324
           P P P  PP    PP P P   PS S       +P +PE  +   P    +  +PP +P 
Sbjct: 620 PSPSPRTPPCAPSPPPPTPPCAPSPSPPTPPPGSPHKPEPQTPVYPEVPRSTRSPPPSPP 679

Query: 323 GSPRYPGICAQTSPSRS*WCPGA**GAPCYSSP 225
            +   PG     +PS            PC SSP
Sbjct: 680 PTESAPGAPPSDTPSCR--------VPPCSSSP 704

>ref|NP_639771.1| putative DNA-binding protein [Streptomyces coelicolor A3(2)]
           gi|17026171|emb|CAD12007.1| putative DNA-binding protein
           [Streptomyces coelicolor A3(2)]
          Length = 561

 Score = 46.6 bits (109), Expect = 2e-04
 Identities = 46/144 (31%), Positives = 60/144 (40%), Gaps = 6/144 (4%)
 Frame = -3

Query: 437 PSGSRTAGRRVAPQRPEQPSSPAPGCEAARAAPPTA--PSGSPRYPGI-CAQTSPSRS*W 267
           PS  R  GRR  P RP  P  P P  +A+R  PPTA   + +PR  G+ CA  S SR+  
Sbjct: 105 PSRPRLGGRRRPPHRPTDPRGPPP-VKASRPTPPTASLEAAAPRTTGVGCAAPSASRTVR 163

Query: 266 CPGA**GAPCYSSPALSRRSLSQSRQRRGREHRSSRRTFPSPSCYREHRHQPGCGE*RSS 87
           C      AP  +SP  S  +   S +               P  + +  ++ G  E    
Sbjct: 164 C------APTSTSPGTSACAAGDSSRAAATRGPEPYAALGLPRVWHDTGYRAGWLE---- 213

Query: 86  DGAAAR*KGVP---GAPPGAH*AP 24
              AA+  GV      PPG H AP
Sbjct: 214 --TAAKRHGVTDWHDVPPG-HRAP 234



EST assemble image


clone accession position
1 LCL044h10_r AV628638 1 274
2 HC008f10_r AV632474 20 508




Chlamydomonas reinhardtii
Kazusa DNA Research Institute