KCC001805A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001805A_C01 KCC001805A_c01
attccagcaacCTTACAATGCAGACGGCATCTGCCTCCAGTTCAAGTACCACTCCTCCCG
GTTCACCACAGGTAAGGTGGTCTAACACTCAAAATCTCCACTCTCCATGCACCACAAACA
ACACCAGCACACACACACCGTACAAGCGCTCTGGCGGTCTCGCCCAAnCnCGAGGTGGCA
CTCGnGCCTTAAGTGGACCCCTGGCCCAACCCTTGGCATGGGCAGGGACCATACGAGCGC
GACGCGCCGACTCCCTGAGTCTAAGAAGGACACGGAAGTCTAACGCACCAAACTC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001805A_C01 KCC001805A_c01
         (295 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAA07052.1| nitrogen response regulator [Metarhizium anisopl...    35  0.38
gb|AAO62420.1| p67-like superoxide-generating NADPH oxidase [Dic...    34  0.65
ref|NP_043349.1| regulatory protein E2 [Human papillomavirus typ...    33  1.1
ref|NP_612024.1| CG13881-PA [Drosophila melanogaster] gi|2309268...    33  1.1
ref|NP_503136.2| putative protein, with 2 coiled coil-4 domains ...    33  1.1

>emb|CAA07052.1| nitrogen response regulator [Metarhizium anisopliae]
          Length = 944

 Score = 34.7 bits (78), Expect = 0.38
 Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
 Frame = +3

Query: 3    SSNLTMQTASASSSSTTPPGSPQVRWSNTQNLHSPCTTN-----NTSTHTPYKRSGGLAQ 167
            S+NL   TA+A+SSST+PPG   V   +++   SP  T+     NT+  TP    G +  
Sbjct: 751  STNLNT-TANANSSSTSPPGGRSVLPKDSE---SPVATSVGSGPNTAGSTPNSHYGNM-- 804

Query: 168  XRGGTRALSGPLAQPLAWA-----------GTIRARRADSLSLRRTRKSNA 287
              G T A  G    P+A A            + R+ +A + S R+ R S +
Sbjct: 805  --GNTAAAGGKGVVPIAAAPPKATPGPGASSSSRSGQASASSKRQRRHSKS 853

>gb|AAO62420.1| p67-like superoxide-generating NADPH oxidase [Dictyostelium
           discoideum] gi|29367189|gb|AAO72634.1| p67-like
           superoxide-generating NADPH oxidase [Dictyostelium
           discoideum]
          Length = 604

 Score = 33.9 bits (76), Expect = 0.65
 Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
 Frame = +3

Query: 3   SSNLTMQTASASSSSTTPPGSPQVRWSNTQNLHSPCTTNNTSTHTPYKRSGGLAQXRGGT 182
           SS+ +  ++S+SSS    P S  +  + T+ +  P TT  TST   + R+  L +  G T
Sbjct: 411 SSSSSSSSSSSSSSYDNKPKSSFIPKTTTRPILPPTTTTTTSTSNNFNRNATLPKKFGST 470

Query: 183 ---RALSGPLAQPLAWAG--TIRARRADSLSL----RRTRKSNAP 290
               + S P +      G   I  R + S+SL     +T+  N P
Sbjct: 471 PSSPSFSSPSSSSSGGGGGPPIPTRGSPSISLLKQQNQTQSINIP 515

>ref|NP_043349.1| regulatory protein E2 [Human papillomavirus type 21]
           gi|1718119|sp|P50767|VE2_HPV21 REGULATORY PROTEIN E2
           gi|1020174|gb|AAA79397.1| regulatory protein E2
          Length = 503

 Score = 33.1 bits (74), Expect = 1.1
 Identities = 23/89 (25%), Positives = 40/89 (44%)
 Frame = +3

Query: 9   NLTMQTASASSSSTTPPGSPQVRWSNTQNLHSPCTTNNTSTHTPYKRSGGLAQXRGGTRA 188
           N+  +T  A  +S+TPP SP  +  +  +  +P TT ++++     R         G R 
Sbjct: 188 NVNKETVFAPVTSSTPPDSPGGQADSNTSSTTPATTTDSTSRLSSTRKQSQQTNTKGRRY 247

Query: 189 LSGPLAQPLAWAGTIRARRADSLSLRRTR 275
              P ++      T + RR+ S S  R+R
Sbjct: 248 GRRPSSRTRRTTQTHQRRRSRSKSRSRSR 276

>ref|NP_612024.1| CG13881-PA [Drosophila melanogaster] gi|23092689|gb|AAF47371.2|
           CG13881-PA [Drosophila melanogaster]
          Length = 1314

 Score = 33.1 bits (74), Expect = 1.1
 Identities = 21/69 (30%), Positives = 32/69 (45%), Gaps = 6/69 (8%)
 Frame = +3

Query: 24  TASASSSSTTPPGSPQVRW------SNTQNLHSPCTTNNTSTHTPYKRSGGLAQXRGGTR 185
           +A+ S+S+TT P  PQ+        +N +  HSP   +    H     S  LAQ  G T+
Sbjct: 473 SATTSTSATTTPSEPQIYGGYYLPHANQRPYHSPTVNSQLPNHYAVGGSLLLAQVTGATQ 532

Query: 186 ALSGPLAQP 212
             + P  +P
Sbjct: 533 GSATPPRRP 541

>ref|NP_503136.2| putative protein, with 2 coiled coil-4 domains (5A595)
            [Caenorhabditis elegans] gi|21328397|gb|AAD14762.2|
            Hypothetical protein Y38C9A.1 [Caenorhabditis elegans]
          Length = 1484

 Score = 33.1 bits (74), Expect = 1.1
 Identities = 20/89 (22%), Positives = 38/89 (42%)
 Frame = +3

Query: 27   ASASSSSTTPPGSPQVRWSNTQNLHSPCTTNNTSTHTPYKRSGGLAQXRGGTRALSGPLA 206
            A+A  +      +  ++W N  +  SP T+N  +          LA   G  RA++ PL 
Sbjct: 1299 AAAKLAQQANDQAQMIQWLNAAHYASPSTSNAATLSANLAALASLAGNSGAQRAVAAPLP 1358

Query: 207  QPLAWAGTIRARRADSLSLRRTRKSNAPN 293
            +P+  +  ++     + S   T   N+P+
Sbjct: 1359 KPVTRSPQVQKPIKPTASRSFTSFQNSPS 1387



EST assemble image


clone accession position
1 HC002f02_r AV631991 1 296
2 LCL048c12_r AV628876 12 198




Chlamydomonas reinhardtii
Kazusa DNA Research Institute