Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001781A_C01 KCC001781A_c01
(481 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL32669.1| RNA helicase, DRH1 [Arabidopsis thaliana] 91 7e-18
ref|NP_850492.1| DEAD box RNA helicase (DRH1) [Arabidopsis thali... 91 7e-18
ref|NP_566141.1| DEAD box RNA helicase (DRH1) [Arabidopsis thali... 91 7e-18
dbj|BAB90677.1| putative RNA helicase, DRH1 [Oryza sativa (japon... 88 6e-17
gb|AAF04377.1|AF188678_1 P72 DEAD box protein [Pisum sativum] 85 5e-16
>gb|AAL32669.1| RNA helicase, DRH1 [Arabidopsis thaliana]
Length = 619
Score = 90.9 bits (224), Expect = 7e-18
Identities = 57/161 (35%), Positives = 77/161 (47%), Gaps = 29/161 (18%)
Frame = +2
Query: 86 DDPSLPSPWQALFDPTSRLKYYWNPTTNVTTYDRPGGA-------------------AAA 208
+D +LP PW+ L D + Y+WNP TNVT Y++P + A
Sbjct: 15 EDHTLPKPWKGLIDDRTGYLYFWNPETNVTQYEKPTPSLPPKFSPAVSVSSSVQVQQTDA 74
Query: 209 PAPASGGDYYSRDRGRDDYASNG--------NGAANGA--NGYAATTVQKTGMTGAPVST 358
AP D YSR R S G NGAANG + Y A + + + AP S
Sbjct: 75 YAPPKDDDKYSRGSERVSRFSEGGRSGPPYSNGAANGVGDSAYGAASTRVPLPSSAPASE 134
Query: 359 DGFMSSADYRRQHDISVQGDHVPEPLQTFESVGFPPDILDE 481
+S Y R+H+I+V G VP PL +FE+ GFPP++L E
Sbjct: 135 ---LSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLRE 172
>ref|NP_850492.1| DEAD box RNA helicase (DRH1) [Arabidopsis thaliana]
gi|25290843|pir||T52137 ATP-dependent DEAD box RNA
helicase DRH1 [validated] - Arabidopsis thaliana
gi|3149952|dbj|BAA28347.1| DRH1 [Arabidopsis thaliana]
gi|6016713|gb|AAF01539.1|AC009325_9 RNA helicase, DRH1
[Arabidopsis thaliana]
Length = 619
Score = 90.9 bits (224), Expect = 7e-18
Identities = 57/161 (35%), Positives = 77/161 (47%), Gaps = 29/161 (18%)
Frame = +2
Query: 86 DDPSLPSPWQALFDPTSRLKYYWNPTTNVTTYDRPGGA-------------------AAA 208
+D +LP PW+ L D + Y+WNP TNVT Y++P + A
Sbjct: 15 EDHTLPKPWKGLIDDRTGYLYFWNPETNVTQYEKPTPSLPPKFSPAVSVSSSVQVQQTDA 74
Query: 209 PAPASGGDYYSRDRGRDDYASNG--------NGAANGA--NGYAATTVQKTGMTGAPVST 358
AP D YSR R S G NGAANG + Y A + + + AP S
Sbjct: 75 YAPPKDDDKYSRGSERVSRFSEGGRSGPPYSNGAANGVGDSAYGAASTRVPLPSSAPASE 134
Query: 359 DGFMSSADYRRQHDISVQGDHVPEPLQTFESVGFPPDILDE 481
+S Y R+H+I+V G VP PL +FE+ GFPP++L E
Sbjct: 135 ---LSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLRE 172
>ref|NP_566141.1| DEAD box RNA helicase (DRH1) [Arabidopsis thaliana]
gi|15215694|gb|AAK91393.1| AT3g01540/F4P13_9
[Arabidopsis thaliana]
gi|16226725|gb|AAL16243.1|AF428313_1 AT3g01540/F4P13_9
[Arabidopsis thaliana] gi|32306509|gb|AAP78938.1|
At3g01540 [Arabidopsis thaliana]
Length = 618
Score = 90.9 bits (224), Expect = 7e-18
Identities = 57/161 (35%), Positives = 77/161 (47%), Gaps = 29/161 (18%)
Frame = +2
Query: 86 DDPSLPSPWQALFDPTSRLKYYWNPTTNVTTYDRPGGA-------------------AAA 208
+D +LP PW+ L D + Y+WNP TNVT Y++P + A
Sbjct: 15 EDHTLPKPWKGLIDDRTGYLYFWNPETNVTQYEKPTPSLPPKFSPAVSVSSSVQVQQTDA 74
Query: 209 PAPASGGDYYSRDRGRDDYASNG--------NGAANGA--NGYAATTVQKTGMTGAPVST 358
AP D YSR R S G NGAANG + Y A + + + AP S
Sbjct: 75 YAPPKDDDKYSRGSERVSRFSEGGRSGPPYSNGAANGVGDSAYGAASTRVPLPSSAPASE 134
Query: 359 DGFMSSADYRRQHDISVQGDHVPEPLQTFESVGFPPDILDE 481
+S Y R+H+I+V G VP PL +FE+ GFPP++L E
Sbjct: 135 ---LSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLRE 172
>dbj|BAB90677.1| putative RNA helicase, DRH1 [Oryza sativa (japonica
cultivar-group)]
Length = 891
Score = 87.8 bits (216), Expect = 6e-17
Identities = 51/150 (34%), Positives = 70/150 (46%), Gaps = 18/150 (12%)
Frame = +2
Query: 86 DDPSLPSPWQALFDPTSRLKYYWNPTTNVTTYDR---------PGGAAAAPAPASGGDYY 238
DDPSLP PW+ L D T+ YYWNP TN+T Y++ P P P SG
Sbjct: 15 DDPSLPKPWRGLVDGTTGYLYYWNPETNITQYEKPLPPEDQLPPPPPLPPPPPRSGRGDR 74
Query: 239 SRDR---------GRDDYASNGNGAANGANGYAATTVQKTGMTGAPVSTDGFMSSADYRR 391
RDR R D+ + + + + A S+ YR
Sbjct: 75 DRDRRDRSRSRTPPRRDHRDRDRDRDRRHDDHRSAPSHHHPLPAAAAIAADDPSTEAYRH 134
Query: 392 QHDISVQGDHVPEPLQTFESVGFPPDILDE 481
+H+I+V GD+VP P+ +FE+ GFPP+IL E
Sbjct: 135 RHEITVVGDNVPAPITSFETGGFPPEILKE 164
>gb|AAF04377.1|AF188678_1 P72 DEAD box protein [Pisum sativum]
Length = 716
Score = 84.7 bits (208), Expect = 5e-16
Identities = 55/156 (35%), Positives = 75/156 (47%), Gaps = 31/156 (19%)
Frame = +2
Query: 107 PWQALFDPTSRLKYYWNPTTNVTTYDRPGGAAAAPAPAS------GGDYYSRDRGR---- 256
PW+ L D + Y+WNP TNVT Y+RP +AA P P++ S+ RGR
Sbjct: 11 PWKGLVDGKTGYLYFWNPETNVTQYERPLSSAAPPKPSAVPSSSVQVQQSSQGRGRSPDF 70
Query: 257 -DDYASNGNGAAN------------GANGYAATTVQKTGMTGAPVSTDGFMSS------- 376
D Y NGNG ++ G N T +TG S G ++S
Sbjct: 71 SDRYDRNGNGGSDESGSRSHQSSKGGTNSSHNNVANGTHVTGNVSSIKGLVASDTGPALT 130
Query: 377 -ADYRRQHDISVQGDHVPEPLQTFESVGFPPDILDE 481
YRR+H+I+V GD+VP P+ +F S GFP +I E
Sbjct: 131 PEAYRRRHEITVTGDNVPPPVMSFASSGFPSEIHKE 166
