KCC001745A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001745A_C01 KCC001745A_c01
CCTCGATCGGCGGCGCTGATATGCCTGTTGTCATTACGCTGCTCAACTCGTACTCGGGCT
ACGCGCTGTGCGCGGAGGGCTTCCTGCTCAACAACGACCTGCTGACGGCGGTGGGCGCGC
TGATCGGCTCCTCGGGCGCCATCCTGTCGTACATCATGTGCACGGCCATGAACCGCTCGC
TGCCCAACGTCATCCTGGGCGGCTACGGCATGACCGCCAAGGCGCCCGCCGACGCCGCCG
CGGTGGCGGGCACGCACCAAGAGATTGACGTGGGCGGCGTGGCGGAGGCGCTGACCACCG
CCTCCAAGGTCATCATCGTGCCCGGCTACGGCATGGCGGTCGCCAACGCGCAGTACCCCG
TGGCCGAGCTGGCCAAGCACCTGACGGACAAGGGCATCAGCGTCAAGTTCGGAATCCAAC
CCGTGGACGGCCGCATGCCCGGCCAGCTCAACGTGCTGCTGGCGGAGGCGAGCGTGCCGT
ACGACGTGGTGTCAGACATGGACGAGATCAACGAGGAGATCGAGGAGGCGGACGTGTGCC
TGGTGATTGGCGCCAACGACACGGTCAACAGCGCGGCGGTGGAGGACCCCAACAGCGTCA
TTGCGGGCATGCCCGTGATTGAGGTGTGGCGCTCCAAGCAGGTGTTCTTCATGAAGCGCA
CCATGGGCGCCGGCTACGCTGGTGCTGAAAATCCCGTTTTCTATAAGCCCAACACCTTCA
TGTTCCTGGGTGACGCCAAGAAGCAGACCGACGCACTGCTGGCGCGCGTCAACGAGACCC
TGGGCATCAAGGCCTAAGCTCGCCGCAACCCTAGCGGCACACCCCGCCTCCCAGGGGCGA
GGCATGTGTGTGCGTATCGGTATGAGGATAGTACAACAGCAGCAGCATGCAAGTTTTGTT
CATGGATGGTGACGGGTCGTACAAAACTCTACGGTTTTTCGCTCGTGGAGCGAGGGTAAA
GCAAATCGCATGGATGGATGTGGGCATGGCATTTATGATGTCAGTTCGGACGAGGCGCCG
GCATTCTTCCCTGCTCCTGGGGCTCCCGCTCCTTCAACACGCGGGACGGGCGCGCAGTTT
CGTGTGCGTGCCCTCCCCCGGAATAACAACACACCGGGCGGCCCGAGGAGCCAGGTGCAG
CCGGCGCAGGCCTGAGGGGCGACGGCGGCGGCGGGTCGCAGGCGGCCCCGCTGAGGAGTG
CTTGACAACAGTAGGGGCGGGAGGCACAGAGAGGCGCGAGTTCCAGAGATCGA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001745A_C01 KCC001745A_c01
         (1253 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAC30596.1| unnamed protein product [Mus musculus]                364  2e-99
dbj|BAC39564.1| unnamed protein product [Mus musculus]                364  2e-99
dbj|BAC28219.1| unnamed protein product [Mus musculus] gi|263424...   364  2e-99
gb|AAF72982.2| nicotinamide nucleotide transhydrogenase [Mus mus...   364  2e-99
gb|AAH08518.1| Nicotinamide nucleotide transhydrogenase [Mus mus...   364  2e-99

>dbj|BAC30596.1| unnamed protein product [Mus musculus]
          Length = 721

 Score =  364 bits (934), Expect = 2e-99
 Identities = 177/259 (68%), Positives = 210/259 (80%)
 Frame = +3

Query: 3    SIGGADMPVVITLLNSYSGYALCAEGFLLNNDLLTAVGALIGSSGAILSYIMCTAMNRSL 182
            +IGGADMPVVIT+LNSYSG+ALCAEGFLLNN+LLT VGALIGSSGAILSYIMC AMNRSL
Sbjct: 460  AIGGADMPVVITVLNSYSGWALCAEGFLLNNNLLTIVGALIGSSGAILSYIMCVAMNRSL 519

Query: 183  PNVILGGYGMTAKAPADAAAVAGTHQEIDVGGVAEALTTASKVIIVPGYGMAVANAQYPV 362
             NVILGGYG T+ A      ++GTH EI++    E +  A+ ++I PGYG+  A AQYP+
Sbjct: 520  ANVILGGYGTTSTAGGKPMEISGTHTEINLDNAVEMIREANSIVITPGYGLCAAKAQYPI 579

Query: 363  AELAKHLTDKGISVKFGIQPVDGRMPGQLNVLLAEASVPYDVVSDMDEINEEIEEADVCL 542
            A+L K LT++G  V+FGI PV GRMPGQLNVLLAEA VPYD+V +MDEIN +  + D+ L
Sbjct: 580  ADLVKMLTEQGKKVRFGIHPVAGRMPGQLNVLLAEAGVPYDIVLEMDEINSDFPDTDLVL 639

Query: 543  VIGANDTVNSAAVEDPNSVIAGMPVIEVWRSKQVFFMKRTMGAGYAGAENPVFYKPNTFM 722
            VIGANDTVNSAA EDPNS+IAGMPV+EVW+SKQV  MKR++G GYA  +NP+FYKPNT M
Sbjct: 640  VIGANDTVNSAAQEDPNSIIAGMPVLEVWKSKQVIVMKRSLGVGYAAVDNPIFYKPNTAM 699

Query: 723  FLGDAKKQTDALLARVNET 779
             LGDAKK  DAL A+V E+
Sbjct: 700  LLGDAKKTCDALQAKVRES 718

>dbj|BAC39564.1| unnamed protein product [Mus musculus]
          Length = 721

 Score =  364 bits (934), Expect = 2e-99
 Identities = 177/259 (68%), Positives = 210/259 (80%)
 Frame = +3

Query: 3    SIGGADMPVVITLLNSYSGYALCAEGFLLNNDLLTAVGALIGSSGAILSYIMCTAMNRSL 182
            +IGGADMPVVIT+LNSYSG+ALCAEGFLLNN+LLT VGALIGSSGAILSYIMC AMNRSL
Sbjct: 460  AIGGADMPVVITVLNSYSGWALCAEGFLLNNNLLTIVGALIGSSGAILSYIMCVAMNRSL 519

Query: 183  PNVILGGYGMTAKAPADAAAVAGTHQEIDVGGVAEALTTASKVIIVPGYGMAVANAQYPV 362
             NVILGGYG T+ A      ++GTH EI++    E +  A+ ++I PGYG+  A AQYP+
Sbjct: 520  ANVILGGYGTTSTAGGKPMEISGTHTEINLDNAVEMIREANSIVITPGYGLCAAKAQYPI 579

Query: 363  AELAKHLTDKGISVKFGIQPVDGRMPGQLNVLLAEASVPYDVVSDMDEINEEIEEADVCL 542
            A+L K LT++G  V+FGI PV GRMPGQLNVLLAEA VPYD+V +MDEIN +  + D+ L
Sbjct: 580  ADLVKMLTEQGKKVRFGIHPVAGRMPGQLNVLLAEAGVPYDIVLEMDEINSDFPDTDLVL 639

Query: 543  VIGANDTVNSAAVEDPNSVIAGMPVIEVWRSKQVFFMKRTMGAGYAGAENPVFYKPNTFM 722
            VIGANDTVNSAA EDPNS+IAGMPV+EVW+SKQV  MKR++G GYA  +NP+FYKPNT M
Sbjct: 640  VIGANDTVNSAAQEDPNSIIAGMPVLEVWKSKQVIVMKRSLGVGYAAVDNPIFYKPNTAM 699

Query: 723  FLGDAKKQTDALLARVNET 779
             LGDAKK  DAL A+V E+
Sbjct: 700  LLGDAKKTCDALQAKVRES 718

>dbj|BAC28219.1| unnamed protein product [Mus musculus] gi|26342462|dbj|BAC34893.1|
            unnamed protein product [Mus musculus]
            gi|26344155|dbj|BAC35734.1| unnamed protein product [Mus
            musculus] gi|26351157|dbj|BAC39215.1| unnamed protein
            product [Mus musculus] gi|26351179|dbj|BAC39226.1|
            unnamed protein product [Mus musculus]
          Length = 835

 Score =  364 bits (934), Expect = 2e-99
 Identities = 177/259 (68%), Positives = 210/259 (80%)
 Frame = +3

Query: 3    SIGGADMPVVITLLNSYSGYALCAEGFLLNNDLLTAVGALIGSSGAILSYIMCTAMNRSL 182
            +IGGADMPVVIT+LNSYSG+ALCAEGFLLNN+LLT VGALIGSSGAILSYIMC AMNRSL
Sbjct: 574  AIGGADMPVVITVLNSYSGWALCAEGFLLNNNLLTIVGALIGSSGAILSYIMCVAMNRSL 633

Query: 183  PNVILGGYGMTAKAPADAAAVAGTHQEIDVGGVAEALTTASKVIIVPGYGMAVANAQYPV 362
             NVILGGYG T+ A      ++GTH EI++    E +  A+ ++I PGYG+  A AQYP+
Sbjct: 634  ANVILGGYGTTSTAGGKPMEISGTHTEINLDNAVEMIREANSIVITPGYGLCAAKAQYPI 693

Query: 363  AELAKHLTDKGISVKFGIQPVDGRMPGQLNVLLAEASVPYDVVSDMDEINEEIEEADVCL 542
            A+L K LT++G  V+FGI PV GRMPGQLNVLLAEA VPYD+V +MDEIN +  + D+ L
Sbjct: 694  ADLVKMLTEQGKKVRFGIHPVAGRMPGQLNVLLAEAGVPYDIVLEMDEINSDFPDTDLVL 753

Query: 543  VIGANDTVNSAAVEDPNSVIAGMPVIEVWRSKQVFFMKRTMGAGYAGAENPVFYKPNTFM 722
            VIGANDTVNSAA EDPNS+IAGMPV+EVW+SKQV  MKR++G GYA  +NP+FYKPNT M
Sbjct: 754  VIGANDTVNSAAQEDPNSIIAGMPVLEVWKSKQVIVMKRSLGVGYAAVDNPIFYKPNTAM 813

Query: 723  FLGDAKKQTDALLARVNET 779
             LGDAKK  DAL A+V E+
Sbjct: 814  LLGDAKKTCDALQAKVRES 832

>gb|AAF72982.2| nicotinamide nucleotide transhydrogenase [Mus musculus]
          Length = 1086

 Score =  364 bits (934), Expect = 2e-99
 Identities = 177/259 (68%), Positives = 210/259 (80%)
 Frame = +3

Query: 3    SIGGADMPVVITLLNSYSGYALCAEGFLLNNDLLTAVGALIGSSGAILSYIMCTAMNRSL 182
            +IGGADMPVVIT+LNSYSG+ALCAEGFLLNN+LLT VGALIGSSGAILSYIMC AMNRSL
Sbjct: 825  AIGGADMPVVITVLNSYSGWALCAEGFLLNNNLLTIVGALIGSSGAILSYIMCVAMNRSL 884

Query: 183  PNVILGGYGMTAKAPADAAAVAGTHQEIDVGGVAEALTTASKVIIVPGYGMAVANAQYPV 362
             NVILGGYG T+ A      ++GTH EI++    E +  A+ ++I PGYG+  A AQYP+
Sbjct: 885  ANVILGGYGTTSTAGGKPMEISGTHTEINLDNAVEMIREANSIVITPGYGLCAAKAQYPI 944

Query: 363  AELAKHLTDKGISVKFGIQPVDGRMPGQLNVLLAEASVPYDVVSDMDEINEEIEEADVCL 542
            A+L K LT++G  V+FGI PV GRMPGQLNVLLAEA VPYD+V +MDEIN +  + D+ L
Sbjct: 945  ADLVKMLTEQGKKVRFGIHPVAGRMPGQLNVLLAEAGVPYDIVLEMDEINSDFPDTDLVL 1004

Query: 543  VIGANDTVNSAAVEDPNSVIAGMPVIEVWRSKQVFFMKRTMGAGYAGAENPVFYKPNTFM 722
            VIGANDTVNSAA EDPNS+IAGMPV+EVW+SKQV  MKR++G GYA  +NP+FYKPNT M
Sbjct: 1005 VIGANDTVNSAAQEDPNSIIAGMPVLEVWKSKQVIVMKRSLGVGYAAVDNPIFYKPNTAM 1064

Query: 723  FLGDAKKQTDALLARVNET 779
             LGDAKK  DAL A+V E+
Sbjct: 1065 LLGDAKKTCDALQAKVRES 1083

>gb|AAH08518.1| Nicotinamide nucleotide transhydrogenase [Mus musculus]
            gi|26352966|dbj|BAC40113.1| unnamed protein product [Mus
            musculus]
          Length = 1086

 Score =  364 bits (934), Expect = 2e-99
 Identities = 177/259 (68%), Positives = 210/259 (80%)
 Frame = +3

Query: 3    SIGGADMPVVITLLNSYSGYALCAEGFLLNNDLLTAVGALIGSSGAILSYIMCTAMNRSL 182
            +IGGADMPVVIT+LNSYSG+ALCAEGFLLNN+LLT VGALIGSSGAILSYIMC AMNRSL
Sbjct: 825  AIGGADMPVVITVLNSYSGWALCAEGFLLNNNLLTIVGALIGSSGAILSYIMCVAMNRSL 884

Query: 183  PNVILGGYGMTAKAPADAAAVAGTHQEIDVGGVAEALTTASKVIIVPGYGMAVANAQYPV 362
             NVILGGYG T+ A      ++GTH EI++    E +  A+ ++I PGYG+  A AQYP+
Sbjct: 885  ANVILGGYGTTSTAGGKPMEISGTHTEINLDNAVEMIREANSIVITPGYGLCAAKAQYPI 944

Query: 363  AELAKHLTDKGISVKFGIQPVDGRMPGQLNVLLAEASVPYDVVSDMDEINEEIEEADVCL 542
            A+L K LT++G  V+FGI PV GRMPGQLNVLLAEA VPYD+V +MDEIN +  + D+ L
Sbjct: 945  ADLVKMLTEQGKKVRFGIHPVAGRMPGQLNVLLAEAGVPYDIVLEMDEINSDFPDTDLVL 1004

Query: 543  VIGANDTVNSAAVEDPNSVIAGMPVIEVWRSKQVFFMKRTMGAGYAGAENPVFYKPNTFM 722
            VIGANDTVNSAA EDPNS+IAGMPV+EVW+SKQV  MKR++G GYA  +NP+FYKPNT M
Sbjct: 1005 VIGANDTVNSAAQEDPNSIIAGMPVLEVWKSKQVIVMKRSLGVGYAAVDNPIFYKPNTAM 1064

Query: 723  FLGDAKKQTDALLARVNET 779
             LGDAKK  DAL A+V E+
Sbjct: 1065 LLGDAKKTCDALQAKVRES 1083



EST assemble image


clone accession position
1 MX033d08_r BP087380 1 506
2 MXL043a12_r BP095519 1 402
3 CM089f07_r AV392249 222 777
4 HCL062f08_r AV643038 528 1050
5 CM096e04_r AV392780 655 1118
6 HC022c12_r AV633563 715 1159
7 LC054h09_r AV622811 718 1253
8 MX066e03_r BP088686 756 1089
9 HC043g04_r AV635240 768 1225
10 HCL093a02_r AV644726 793 1219




Chlamydomonas reinhardtii
Kazusa DNA Research Institute