Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001736A_C01 KCC001736A_c01
(694 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB89854.1| putative signal recognition particle 54K protein... 101 9e-21
pir||S51597 signal recognition particle 54K protein - tomato (cv... 100 2e-20
sp|P49971|SR51_LYCES SIGNAL RECOGNITION PARTICLE 54 KD PROTEIN 1... 100 2e-20
sp|P49968|SR51_HORVU SIGNAL RECOGNITION PARTICLE 54 KD PROTEIN 1... 100 3e-20
sp|P49969|SR52_HORVU SIGNAL RECOGNITION PARTICLE 54 KD PROTEIN 2... 100 3e-20
>dbj|BAB89854.1| putative signal recognition particle 54K protein [Oryza sativa
(japonica cultivar-group)] gi|21743252|dbj|BAC03250.1|
putative signal recognition particle 54K protein [Oryza
sativa (japonica cultivar-group)]
gi|32879776|dbj|BAC79360.1| signal recognition particle
54kDa subunit [Oryza sativa (japonica cultivar-group)]
Length = 496
Score = 101 bits (252), Expect = 9e-21
Identities = 57/125 (45%), Positives = 84/125 (66%)
Frame = +2
Query: 8 IRRYITIIESMTDKEMDTTNIKMLSETSRVNRLARGSGSTPAQVLALLESYKHYSKYATQ 187
I+RY+T+++SMTD E+D+TN K+++E SR+ R+ARGSG V+ +LE YK +K ++
Sbjct: 373 IKRYMTMMDSMTDGELDSTNPKLMTE-SRILRIARGSGRPVRDVVDMLEEYKRLAKIWSK 431
Query: 188 ALKAANLPKNLKGMKGDVQMNPRQMQAALGKMSRALPPQLMQQLGGMSGLQSLMKGLDGK 367
+K +PK KG++ R M MS+ LPPQ+++Q+GGM GLQSLMK + K
Sbjct: 432 -MKGLKIPK-----KGEMSALSRNMNVQ--HMSKVLPPQMLKQIGGMGGLQSLMKQMGSK 483
Query: 368 MMGGM 382
MGGM
Sbjct: 484 EMGGM 488
>pir||S51597 signal recognition particle 54K protein - tomato (cv. Rentita)
Length = 496
Score = 100 bits (250), Expect = 2e-20
Identities = 60/131 (45%), Positives = 87/131 (65%), Gaps = 2/131 (1%)
Frame = +2
Query: 11 RRYITIIESMTDKEMDTTNIKMLSETSRVNRLARGSGSTPAQVLALLESYKHYSKYATQA 190
+RY+T+++SMTD+E+D+TN K+L+E SR+ R+ARGSG +V+ +LE YK +K ++
Sbjct: 374 KRYMTMMDSMTDEELDSTNPKILTE-SRIMRIARGSGRLVHEVMEMLEEYKRLAKIFSK- 431
Query: 191 LKAANLPKNLKGMKGDVQMNPRQMQAALGKMSRALPPQLMQQLGGMSGLQSLMK--GLDG 364
+K +PK KGD+ R M A MS+ LPPQ+++Q+GGM GLQ+LMK G
Sbjct: 432 MKGLKIPK-----KGDMSSLSRNMNAQ--NMSKVLPPQMLKQIGGMGGLQNLMKQMGSAK 484
Query: 365 KMMGGMGK*GG 397
MMG G GG
Sbjct: 485 DMMGMFGGGGG 495
>sp|P49971|SR51_LYCES SIGNAL RECOGNITION PARTICLE 54 KD PROTEIN 1 (SRP54)
gi|556900|emb|CAA84275.1| 54-kD signal recognition
particle (SRP) specific protein [Lycopersicon
esculentum]
Length = 496
Score = 100 bits (250), Expect = 2e-20
Identities = 60/131 (45%), Positives = 87/131 (65%), Gaps = 2/131 (1%)
Frame = +2
Query: 11 RRYITIIESMTDKEMDTTNIKMLSETSRVNRLARGSGSTPAQVLALLESYKHYSKYATQA 190
+RY+T+++SMTD+E+D+TN K+L+E SR+ R+ARGSG +V+ +LE YK +K ++
Sbjct: 374 KRYMTMMDSMTDEELDSTNPKILTE-SRIMRIARGSGRLVHEVMEMLEEYKRLAKIFSK- 431
Query: 191 LKAANLPKNLKGMKGDVQMNPRQMQAALGKMSRALPPQLMQQLGGMSGLQSLMK--GLDG 364
+K +PK KGD+ R M A MS+ LPPQ+++Q+GGM GLQ+LMK G
Sbjct: 432 MKGLKIPK-----KGDMSSLSRNMNAQ--NMSKVLPPQMLKQIGGMGGLQNLMKQMGSAK 484
Query: 365 KMMGGMGK*GG 397
MMG G GG
Sbjct: 485 DMMGMFGGGGG 495
>sp|P49968|SR51_HORVU SIGNAL RECOGNITION PARTICLE 54 KD PROTEIN 1 (SRP54)
gi|7440067|pir||T06185 signal recognition particle 54 K
protein - barley gi|1020000|gb|AAA79354.1| signal
recognition particle 54 kDa subunit [Hordeum vulgare]
Length = 497
Score = 100 bits (248), Expect = 3e-20
Identities = 59/130 (45%), Positives = 86/130 (65%), Gaps = 4/130 (3%)
Frame = +2
Query: 8 IRRYITIIESMTDKEMDTTNIKMLSETSRVNRLARGSGSTPAQVLALLESYKHYSKYATQ 187
I+RY+TI++SMT E+D+TN K+++E SR+ R+ARGSG V +LE YK +K ++
Sbjct: 373 IKRYMTIMDSMTAAELDSTNPKLMTE-SRIIRIARGSGRQIRDVTDMLEEYKRLAKMWSK 431
Query: 188 ALKAANLPKNLKGMKGDVQMNPRQMQAALGKMSRALPPQLMQQLGGMSGLQSLMKGLDG- 364
+K +PKN G D+ N Q M++ALPPQ+++Q+GGM GLQ+LMK + G
Sbjct: 432 -MKGLKMPKN--GKMSDLSQNLNIQQ-----MTKALPPQVLKQMGGMGGLQALMKQMGGK 483
Query: 365 ---KMMGGMG 385
KM+GGMG
Sbjct: 484 DMSKMLGGMG 493
>sp|P49969|SR52_HORVU SIGNAL RECOGNITION PARTICLE 54 KD PROTEIN 2 (SRP54)
gi|7440068|pir||T06186 signal recognition particle 54 K
protein 2 - barley gi|1020002|gb|AAA79355.1| signal
recognition particle 54 kDa subunit [Hordeum vulgare]
Length = 497
Score = 100 bits (248), Expect = 3e-20
Identities = 59/130 (45%), Positives = 86/130 (65%), Gaps = 4/130 (3%)
Frame = +2
Query: 8 IRRYITIIESMTDKEMDTTNIKMLSETSRVNRLARGSGSTPAQVLALLESYKHYSKYATQ 187
I+RY+TI++SMT E+D+TN K+++E SR+ R+ARGSG V +LE YK +K ++
Sbjct: 373 IKRYMTIMDSMTAAELDSTNPKLMTE-SRIIRIARGSGRQIRDVTDMLEEYKRLAKMWSK 431
Query: 188 ALKAANLPKNLKGMKGDVQMNPRQMQAALGKMSRALPPQLMQQLGGMSGLQSLMKGLDG- 364
+K +PKN G D+ N Q M++ALPPQ+++Q+GGM GLQ+LMK + G
Sbjct: 432 -MKGLKMPKN--GKMSDLSQNLNIQQ-----MTKALPPQVLKQMGGMGGLQALMKQMGGK 483
Query: 365 ---KMMGGMG 385
KM+GGMG
Sbjct: 484 DMSKMLGGMG 493
