KCC001720A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001720A_C01 KCC001720A_c01
gcaccagtgcgggtaggtgcaggtgggcggtggacgagtggtgcaggcgcgcggcggagg
gagggagacctcagcgcccaTCCACCGGGCGCTGTGGCGGGCTGCGGTCGTCGCCTGCTG
TCGAGCGTTGCGTAGGGTGCTGGGCTGGCCCTGGTGGAGTGCGCGGGGTGGTTCGTGGTG
CCATCCTGTTGCATAGGGGCTGAACTTCAAACCCTACTACAGAGGATGGCCTGGATGGTC
GGGCCTAGGGTCTAGTCAAGGGGTCAACAGGGGAGCTACCGGGTAGTAGTGTGCGGCAGG
AGGTGCACCGCCAGGACGCGGGGCGCGGTATCGGCAGGCGCACAGCTGGCGTGATGCTCT
CGCGTAGCCGGCGGGCCTGCCAGCCGCGTGTGTGAGTAGACTGCTGTCCAGAAACTTATG
AGCGCCCGTGTGCGCTTTACGCATTAGGTGTGGGTTTAGCGTGTTGCCGTGCGGTGCTGC
GGTCGGCACGGTCGGTGCAATTCACAAGTCGTGTGGACGCGTTGTGCGCGCGCACGTGCA
GGTCTGTGGACATGAACGCGAGAGGTGCCGGTGCAAGGGGCATCCTGGCACACAAGAGAG
ACGAGTGAGCTTGGCACCTGGGGCACGGTTAGTAAGAccgagggagactgtgggaagcca
tggaggcagctagggagttctggaatgcgcgagggaggcatatgtaaatcgagcttc


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001720A_C01 KCC001720A_c01
         (717 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_730262.2| CG13731-PA [Drosophila melanogaster] gi|2838049...    33  0.005
ref|XP_032278.4| similar to KIAA0545 protein [Homo sapiens]            42  0.010
dbj|BAA25471.2| KIAA0545 protein [Homo sapiens]                        42  0.010
sp|P09125|MSP8_EIMAC MEROZOITE SURFACE PROTEIN CMZ-8 gi|84174|pi...    42  0.012
emb|CAD87805.1| SI:zC215I13.6 (novel protein remotely similar to...    40  0.047

>ref|NP_730262.2| CG13731-PA [Drosophila melanogaster] gi|28380492|gb|AAF49349.4|
           CG13731-PA [Drosophila melanogaster]
          Length = 926

 Score = 33.1 bits (74), Expect(2) = 0.005
 Identities = 26/84 (30%), Positives = 33/84 (38%), Gaps = 7/84 (8%)
 Frame = -3

Query: 349 PAVRLPIPRPASWRCTSCRTLLPGSSPVDPLTRP*ARPSRPSSVVGFEVQPLCNRMAP-- 176
           P   LP     + R T   T  P   P  P TRP   P+R S+     + P    + P  
Sbjct: 542 PTTYLPPVTVRTTRATPPPTRPPTRPPTPPPTRPPPPPTRASTPAPTYLPPTNKPLPPVT 601

Query: 175 -----RTTPRTPPGPAQHPTQRST 119
                RTTPR    P + PT+  T
Sbjct: 602 VRTTVRTTPRPTLPPTKPPTRPPT 625

 Score = 33.1 bits (74), Expect = 4.4
 Identities = 37/122 (30%), Positives = 44/122 (35%), Gaps = 8/122 (6%)
 Frame = -3

Query: 352 TPAVRLPIPRPASWRCTS------CRTLLPGSSPVDPLTRP*ARPSRPSSVVGFEVQPLC 191
           TP   LP  +P +   T+       RT  P   P  P T+P      P +V      P  
Sbjct: 501 TPRPTLPPTKPPTRPPTTYLPPPTVRTTRPPPPPTRPPTKPPTTYLPPVTVRTTRATPPP 560

Query: 190 NRMAPRTTPRTPPG--PAQHPTQRSTAGDDRSPPQRPVDGR*GLPPSAARLHHSSTAHLH 17
            R  P T P TPP   P   PT+ ST      PP         LPP   R    +T    
Sbjct: 561 TR--PPTRPPTPPPTRPPPPPTRASTPAPTYLPPTNK-----PLPPVTVRTTVRTTPRPT 613

Query: 16  LP 11
           LP
Sbjct: 614 LP 615

 Score = 32.7 bits (73), Expect = 5.8
 Identities = 34/113 (30%), Positives = 40/113 (35%)
 Frame = -3

Query: 349 PAVRLPIPRPASWRCTSCRTLLPGSSPVDPLTRP*ARPSRPSSVVGFEVQPLCNRMAPRT 170
           P    P+P P + R T   T  P   P  P TRP      P SV      P      P T
Sbjct: 591 PPTNKPLP-PVTVRTTVRTTPRPTLPPTKPPTRPPTTYLPPPSVRTTRPPP------PPT 643

Query: 169 TPRTPPGPAQHPTQRSTAGDDRSPPQRPVDGR*GLPPSAARLHHSSTAHLHLP 11
            P T P     P           PP RP       PP+  RL  ++ A  +LP
Sbjct: 644 RPPTKPPTTYLPPVTVRTTRATPPPTRPPTRPPTYPPTTRRL--TTPAPTYLP 694

 Score = 32.0 bits (71), Expect(2) = 0.011
 Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 7/58 (12%)
 Frame = -3

Query: 271 PVDPLTRP*ARPSRPSSVVGFEVQPLCNRMAP-------RTTPRTPPGPAQHPTQRST 119
           P  P TRP   P+R S+     + P    + P       RTTPR  P P + PT+  T
Sbjct: 357 PTPPPTRPPPPPTRASTPAPTYLPPTNKPLPPVTVRTTVRTTPRPTPPPTKPPTRPPT 414

 Score = 32.0 bits (71), Expect(2) = 0.50
 Identities = 27/88 (30%), Positives = 33/88 (36%)
 Frame = -3

Query: 349 PAVRLPIPRPASWRCTSCRTLLPGSSPVDPLTRP*ARPSRPSSVVGFEVQPLCNRMAPRT 170
           P V   +P   +   T   T  P   P  P TRP   P+ P + +     P  N+  P  
Sbjct: 172 PDVPFDLPVRTTQPPTRPPTRPPTRPPTRPPTRP---PTPPPTYL-----PPTNKPLPPV 223

Query: 169 TPRTPPGPAQHPTQRSTAGDDRSPPQRP 86
           T R PP P    T   T    R P  RP
Sbjct: 224 TTRLPPPPPPPRTPPPTRPPTRPPTTRP 251

 Score = 32.0 bits (71), Expect = 9.9
 Identities = 33/113 (29%), Positives = 40/113 (35%)
 Frame = -3

Query: 349 PAVRLPIPRPASWRCTSCRTLLPGSSPVDPLTRP*ARPSRPSSVVGFEVQPLCNRMAPRT 170
           P    P+P P + R T   T  P   P  P TRP      P +V      P      P T
Sbjct: 380 PPTNKPLP-PVTVRTTVRTTPRPTPPPTKPPTRPPTTYLPPPTVRTTRPPP------PPT 432

Query: 169 TPRTPPGPAQHPTQRSTAGDDRSPPQRPVDGR*GLPPSAARLHHSSTAHLHLP 11
            P T P     P           PP RP       PP+  RL  ++ A  +LP
Sbjct: 433 RPPTKPPTTYLPPVTVRTTRATPPPTRPPTRPPTYPPTTRRL--TTPAPTYLP 483

 Score = 29.3 bits (64), Expect(2) = 0.066
 Identities = 21/78 (26%), Positives = 31/78 (38%)
 Frame = -3

Query: 352 TPAVRLPIPRPASWRCTSCRTLLPGSSPVDPLTRP*ARPSRPSSVVGFEVQPLCNRMAPR 173
           TP    P  RP ++  T+ R   P  + + P  +P              + P+  R   R
Sbjct: 768 TPPPTRPPTRPPTYPPTTRRLTTPAPTYLPPTNKP--------------LPPVTVRTTVR 813

Query: 172 TTPRTPPGPAQHPTQRST 119
           TTPR    P + PT+  T
Sbjct: 814 TTPRPTLPPTRPPTKPPT 831

 Score = 29.3 bits (64), Expect(2) = 0.066
 Identities = 21/78 (26%), Positives = 31/78 (38%)
 Frame = -3

Query: 352 TPAVRLPIPRPASWRCTSCRTLLPGSSPVDPLTRP*ARPSRPSSVVGFEVQPLCNRMAPR 173
           TP    P  RP ++  T+ R   P  + + P  +P              + P+  R   R
Sbjct: 665 TPPPTRPPTRPPTYPPTTRRLTTPAPTYLPPTNKP--------------LPPVTVRTTVR 710

Query: 172 TTPRTPPGPAQHPTQRST 119
           TTPR    P + PT+  T
Sbjct: 711 TTPRPTLPPTKPPTRPPT 728

 Score = 29.3 bits (64), Expect(2) = 0.066
 Identities = 21/78 (26%), Positives = 31/78 (38%)
 Frame = -3

Query: 352 TPAVRLPIPRPASWRCTSCRTLLPGSSPVDPLTRP*ARPSRPSSVVGFEVQPLCNRMAPR 173
           TP    P  RP ++  T+ R   P  + + P  +P              + P+  R   R
Sbjct: 454 TPPPTRPPTRPPTYPPTTRRLTTPAPTYLPPTNKP--------------LPPVTVRTTVR 499

Query: 172 TTPRTPPGPAQHPTQRST 119
           TTPR    P + PT+  T
Sbjct: 500 TTPRPTLPPTKPPTRPPT 517

 Score = 28.9 bits (63), Expect(2) = 0.066
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = -1

Query: 63  LPPPRACTTRPPPTCTYP 10
           LPPP   TTRPPP  T P
Sbjct: 834 LPPPTVRTTRPPPPPTRP 851

 Score = 28.9 bits (63), Expect(2) = 0.005
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = -1

Query: 63  LPPPRACTTRPPPTCTYP 10
           LPPP   TTRPPP  T P
Sbjct: 628 LPPPSVRTTRPPPPPTRP 645

 Score = 28.9 bits (63), Expect(2) = 0.066
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = -1

Query: 63  LPPPRACTTRPPPTCTYP 10
           LPPP   TTRPPP  T P
Sbjct: 731 LPPPTVRTTRPPPPPTRP 748

 Score = 28.9 bits (63), Expect(2) = 0.066
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = -1

Query: 63  LPPPRACTTRPPPTCTYP 10
           LPPP   TTRPPP  T P
Sbjct: 520 LPPPTVRTTRPPPPPTRP 537

 Score = 28.9 bits (63), Expect(2) = 0.011
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = -1

Query: 63  LPPPRACTTRPPPTCTYP 10
           LPPP   TTRPPP  T P
Sbjct: 417 LPPPTVRTTRPPPPPTRP 434

 Score = 23.1 bits (48), Expect(2) = 0.50
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -1

Query: 60  PPPRACTTRPPPTCTYP 10
           PP R  TTRPP T   P
Sbjct: 285 PPTRPPTTRPPATYLPP 301

>ref|XP_032278.4| similar to KIAA0545 protein [Homo sapiens]
          Length = 1781

 Score = 42.0 bits (97), Expect = 0.010
 Identities = 43/149 (28%), Positives = 62/149 (40%), Gaps = 16/149 (10%)
 Frame = -3

Query: 406  QQSTHTRGW---------QARRLRESITPAVRLPIPRPASWRCT--SCRTLLPGSSPVDP 260
            +  T  RGW         + +  +ESITP  R P    A W+ +  +    LP S    P
Sbjct: 1042 EDGTPRRGWPETYDMNTSEPKTEQESITPGGRPPYRSNAPWQWSGPASHNSLPASKWATP 1101

Query: 259  LT----RP*ARPSRPSSVVGF-EVQPLCNRMAPRTTPRTPPGPAQHPTQRSTAGDDRSPP 95
             T    +  +RP + + +V F E QPL ++  P + P T       P   S AG DR PP
Sbjct: 1102 TTPGHAQSLSRPLKQTPIVPFRESQPLHSK-RPVSFPET-------PYTVSPAGADRVPP 1153

Query: 94   QRPVDGR*GLPPSAARLHHSSTAHLHLPA 8
             R   G    P SA  + +  +   +  A
Sbjct: 1154 YRQPSGSFSTPGSATYVRYKPSPERYTAA 1182

>dbj|BAA25471.2| KIAA0545 protein [Homo sapiens]
          Length = 1368

 Score = 42.0 bits (97), Expect = 0.010
 Identities = 43/149 (28%), Positives = 62/149 (40%), Gaps = 16/149 (10%)
 Frame = -3

Query: 406  QQSTHTRGW---------QARRLRESITPAVRLPIPRPASWRCT--SCRTLLPGSSPVDP 260
            +  T  RGW         + +  +ESITP  R P    A W+ +  +    LP S    P
Sbjct: 629  EDGTPRRGWPETYDMNTSEPKTEQESITPGGRPPYRSNAPWQWSGPASHNSLPASKWATP 688

Query: 259  LT----RP*ARPSRPSSVVGF-EVQPLCNRMAPRTTPRTPPGPAQHPTQRSTAGDDRSPP 95
             T    +  +RP + + +V F E QPL ++  P + P T       P   S AG DR PP
Sbjct: 689  TTPGHAQSLSRPLKQTPIVPFRESQPLHSK-RPVSFPET-------PYTVSPAGADRVPP 740

Query: 94   QRPVDGR*GLPPSAARLHHSSTAHLHLPA 8
             R   G    P SA  + +  +   +  A
Sbjct: 741  YRQPSGSFSTPGSATYVRYKPSPERYTAA 769

>sp|P09125|MSP8_EIMAC MEROZOITE SURFACE PROTEIN CMZ-8 gi|84174|pir||S01704 merozoite
           surface antigen - Eimeria acervulina (fragment)
           gi|9246|emb|CAA30977.1| EAMZp35 protein [Eimeria
           acervulina]
          Length = 259

 Score = 41.6 bits (96), Expect = 0.012
 Identities = 31/96 (32%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
 Frame = -3

Query: 337 LPIPRPASWRCTSCRTLLPGSSPVDPLTRP*ARPSRPSSVVGFEVQPLCNRMAPRTTPRT 158
           LP   P++        + P S+PV P + P + PS P S     V P    ++P +TP +
Sbjct: 2   LPFSPPSTPVSPPSTPVSPPSTPVSPPSTPVSPPSTPVSPPSTPVSPPSTPVSPPSTPVS 61

Query: 157 PPGPAQHP--TQRSTAGDDRSPPQRPVDGR*GLPPS 56
           PP     P  T  S      SPP  PV      PPS
Sbjct: 62  PPSTPVSPPSTPVSPPSTPVSPPSTPVS-----PPS 92

 Score = 40.4 bits (93), Expect = 0.028
 Identities = 29/106 (27%), Positives = 45/106 (42%)
 Frame = -3

Query: 334 PIPRPASWRCTSCRTLLPGSSPVDPLTRP*ARPSRPSSVVGFEVQPLCNRMAPRTTPRTP 155
           P+  P++        + P S+PV P + P + PS P S     V P    ++P +TP +P
Sbjct: 31  PVSPPSTPVSPPSTPVSPPSTPVSPPSTPVSPPSTPVSPPSTPVSPPSTPVSPPSTPVSP 90

Query: 154 PGPAQHPTQRSTAGDDRSPPQRPVDGR*GLPPSAARLHHSSTAHLH 17
           P     P          SPP  P  G  G   +++    S++ H H
Sbjct: 91  PSTPVSPPSTPV-----SPPSSPAPGAVG-GVNSSLSQRSTSEHWH 130

>emb|CAD87805.1| SI:zC215I13.6 (novel protein remotely similar to human LYRIC
           protein) [Danio rerio]
          Length = 544

 Score = 39.7 bits (91), Expect = 0.047
 Identities = 20/54 (37%), Positives = 29/54 (53%)
 Frame = -2

Query: 167 PAHSTRASPAPYATLDSRRRPQPATAPGGWALRSPSLRRAPAPLVHRPPAPTRT 6
           PA +   +PAP  T      P PA+AP    + +P  ++ PAP   +PPA T+T
Sbjct: 145 PAPTPTRAPAPAPTRAPAPAPTPASAPAPVPVPAPKPKQKPAPTPAQPPADTKT 198



EST assemble image


clone accession position
1 CM085a12_r AV392405 1 496
2 MX050e08_r BP088059 115 460
3 MXL078e04_r BP097612 334 717




Chlamydomonas reinhardtii
Kazusa DNA Research Institute