Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001710A_C01 KCC001710A_c01
(647 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_213440.1| similar to Collagen alpha1 [Rattus norvegicus] 54 3e-06
sp|P03181|YHL1_EBV HYPOTHETICAL BHLF1 PROTEIN gi|73912|pir||QQBE... 54 3e-06
sp|P11087|CA11_MOUSE Collagen alpha 1(I) chain precursor gi|7441... 53 3e-06
ref|XP_109776.3| similar to Collagen alpha1 [Rattus norvegicus] ... 53 3e-06
gb|AAH59281.1| Unknown (protein for MGC:68307) [Mus musculus] 53 3e-06
>ref|XP_213440.1| similar to Collagen alpha1 [Rattus norvegicus]
Length = 1453
Score = 53.5 bits (127), Expect = 3e-06
Identities = 73/233 (31%), Positives = 85/233 (36%), Gaps = 32/233 (13%)
Frame = +1
Query: 34 PERHPGG-GRGGAVHQLGQVPH*GSVCAGGEPLPLGGQQPVRGP----------PDTARQ 180
P PG GR G G + G+V A G P P G P P P AR
Sbjct: 292 PRGLPGERGRPGPPGSAGARGNDGAVGAAGPPGPTGPTGPPGFPGAAGAKGEAGPQGARG 351
Query: 181 LRAPERLLCGHAVRARPAPDASRWPWPAWTRRCGPAACASTSRQRASSRLSAAPCVAGCA 360
P+ VR P P P PA GPA Q + + AP +AG
Sbjct: 352 SEGPQ------GVRGEPGP-----PGPAGA--AGPAGNPGADGQPGAKGANGAPGIAGAP 398
Query: 361 GRDGRGGLVG--GPAG--GARGQCARV-RPGTRHGAGVPGWPAAAAVM-----AGT--VR 504
G G G G GP+G G +G PG + G G P A V AG R
Sbjct: 399 GFPGARGPSGPQGPSGAPGPKGNSGEPGAPGNKGDTGAKGEPGPAGVQGPPGPAGEEGKR 458
Query: 505 GGRPRLQPRLLHAGPGQPGATGQQ----ARG*ALPYGPAA-----GPAAKQVS 636
G R P L PG+ G G + A G A P GPA GPA + S
Sbjct: 459 GARGEPGPSGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGS 511
Score = 37.7 bits (86), Expect = 0.15
Identities = 40/121 (33%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Frame = +1
Query: 280 GPAACASTSRQRASSRLSAAPCVAGCAGRDGRGGLVG--GPAGGARGQCARVRPGTRHGA 453
GP A + + P G AG+DG G G GPAG A + G + A
Sbjct: 573 GPKGTAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGAPGPAGPAGER------GEQGPA 626
Query: 454 GVPGWPAAAAVMAGTVRGGRPRLQ--PRLLHAGPGQPGATGQQA----RG*ALPYGPAAG 615
G PG+ G+P Q P L A PG GA G++ RG P GP AG
Sbjct: 627 GSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGA-PGPSGARGERGFPGERGVQGPPGP-AG 684
Query: 616 P 618
P
Sbjct: 685 P 685
Score = 37.4 bits (85), Expect = 0.19
Identities = 62/227 (27%), Positives = 79/227 (34%), Gaps = 34/227 (14%)
Frame = -1
Query: 623 AAGPAA-----GPYGSAHPRACCPVA--------PG*PGPAWR--RRG-----WRRGRP- 507
A GPA GP G A R + PG PGP+ ++G RG P
Sbjct: 928 ADGPAGSPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPG 987
Query: 506 PRTVPAMTA--AAAGQPGTPAPWRVPGRTRAHCPRAP-----PAGPPTSPPRPSRPAQPA 348
P P + +G+ G+P PGR A + PAGPP +P P P
Sbjct: 988 PMGPPGLAGPPGESGREGSPGAEGSPGRDGAPGAKGDRGETGPAGPPGAPGAPGAPGPVG 1047
Query: 347 TQGAALKRELARCRLVDAQAAGPHRRVQAGQGHLLASGAGRARTAWPQ-----RSLSGAR 183
G + R A AGP AG A PQ + +G +
Sbjct: 1048 PAG----KNGDRGETGPAGPAGP------------IGPAGARGPAGPQGPRGDKGETGEQ 1091
Query: 182 SWRAVSGGPR-TGCWPPSGSGSPPAHTDPQCGTCPN*CTAPPRPPPG 45
R + G +G P GS P P + P A PR PPG
Sbjct: 1092 GDRGIKGHRGFSGLQGPPGSPGSPGEQGPSGASGP----AGPRGPPG 1134
Score = 36.6 bits (83), Expect = 0.33
Identities = 39/107 (36%), Positives = 44/107 (40%), Gaps = 17/107 (15%)
Frame = +1
Query: 352 GCAGRDGRGGLVG-----------------GPAGGARGQCARVRPGTRHGAGVPGWPAAA 480
G G+DG GL G GP+G A AR PG R G PG PA
Sbjct: 744 GSPGKDGVRGLTGPIGPPGPAGAPGDKGETGPSGPAGPTGARGAPGDRGEPGPPG-PAGF 802
Query: 481 AVMAGTVRGGRPRLQPRLLHAGPGQPGATGQQARG*ALPYGPAAGPA 621
A G G+P G+PG TG +G A P GP AGPA
Sbjct: 803 AGPPGA--DGQP--------GAKGEPGDTG--VKGDAGPPGP-AGPA 836
Score = 35.4 bits (80), Expect = 0.73
Identities = 25/72 (34%), Positives = 28/72 (38%)
Frame = -1
Query: 605 GPYGSAHPRACCPVAPG*PGPAWRRRGWRRGRPPRTVPAMTAAAAGQPGTPAPWRVPGRT 426
GP G+A P PG PGP + G +G T PA G PG P P G
Sbjct: 876 GPSGNAGP-------PGPPGPVGKEGG--KGPRGETGPAGRPGEVGPPGPPGPAGEKGSP 926
Query: 425 RAHCPRAPPAGP 390
A P P P
Sbjct: 927 GADGPAGSPGTP 938
Score = 34.7 bits (78), Expect = 1.2
Identities = 63/237 (26%), Positives = 76/237 (31%), Gaps = 31/237 (13%)
Frame = +1
Query: 10 GQDDPVRHPERHPGGGRGGAVHQLGQVPH*GSVCAGGEPLPLGGQQPVRGPPDTARQL-R 186
G P R G GA Q G + G GEP G++ V GPP +
Sbjct: 543 GPPGPAGQDGRPGPAGPPGARGQAGVMGFPGPKGTAGEP-GKAGERGVPGPPGAVGPAGK 601
Query: 187 APERLLCGHAVRARPA-----------PDASRWPWPAWTRRCGPAACASTSRQRASSRLS 333
E G A PA P P PA GP A ++
Sbjct: 602 DGEAGAQGAPGPAGPAGERGEQGPAGSPGFQGLPGPA-----GPPGEAGKPGEQGVPGDL 656
Query: 334 AAPCVAGCAGRDGRGGLVG-----GPAGGARGQCARVRPGTRHGAGVPGWPAA------- 477
AP +G G G G G GPAG A G + G PG P +
Sbjct: 657 GAPGPSGARGERGFPGERGVQGPPGPAGPRGNNGAPGNDGAKGDTGAPGAPGSQGAPGLQ 716
Query: 478 -------AAVMAGTVRGGRPRLQPRLLHAGPGQPGATGQQARG*ALPYGPAAGPAAK 627
AA + G +G R P+ PG+ G G G P GPA P K
Sbjct: 717 GMPGERGAAGLPGP-KGDRGDAGPKGADGSPGKDGVRG--LTGPIGPPGPAGAPGDK 770
Score = 33.5 bits (75), Expect = 2.8
Identities = 50/180 (27%), Positives = 62/180 (33%), Gaps = 16/180 (8%)
Frame = -1
Query: 608 AGPYGSAHPRACCPVAPG*PGPAWRR-RGWRRGRPPRTVPAMTAAAAGQPGTPAPWRVPG 432
AG G A R P PG GPA + +G P PA G G+P +PG
Sbjct: 578 AGEPGKAGERGV-PGPPGAVGPAGKDGEAGAQGAPGPAGPAGERGEQGPAGSPGFQGLPG 636
Query: 431 RTRAHCPRAPPAGPPTSPPRPSRP------AQPATQGAALKRELARCRLVDAQ--AAGPH 276
PAGPP +P P GA +R R V AGP
Sbjct: 637 ----------PAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPR 686
Query: 275 RRVQA-----GQGHLLASGAGRARTAWPQRSLSGARSWRAVSG--GPRTGCWPPSGSGSP 117
A +G A GA ++ A + + G R + G G R P GSP
Sbjct: 687 GNNGAPGNDGAKGDTGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSP 746
Score = 33.5 bits (75), Expect = 2.8
Identities = 25/82 (30%), Positives = 30/82 (36%), Gaps = 8/82 (9%)
Frame = -1
Query: 557 G*PGPAWRRRGWRRGRPPRTVPAMTAAAAGQPGTPAPWRVPGRTRAHCPRAP-------- 402
G PGPA +RG P+ G+ G P PG P+ P
Sbjct: 447 GPPGPAGEEG--KRGARGEPGPSGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPG 504
Query: 401 PAGPPTSPPRPSRPAQPATQGA 336
PAGP SP RP + GA
Sbjct: 505 PAGPKGSPGEAGRPGEAGLPGA 526
Score = 32.7 bits (73), Expect = 4.7
Identities = 29/88 (32%), Positives = 34/88 (37%), Gaps = 2/88 (2%)
Frame = -1
Query: 605 GPYGSAHPRACCPVAPG*PGPAWRRRGWRRGRPPRTVPAMTAAAA--GQPGTPAPWRVPG 432
GP GS P +PG GP+ G PR P + G G P P PG
Sbjct: 1107 GPPGS-------PGSPGEQGPS----GASGPAGPRGPPGSAGSPGKDGLNGLPGPIGPPG 1155
Query: 431 RTRAHCPRAPPAGPPTSPPRPSRPAQPA 348
R + PAGPP P P P P+
Sbjct: 1156 -PRGRTGDSGPAGPPGPPGPPGPPGPPS 1182
Score = 32.7 bits (73), Expect = 4.7
Identities = 33/97 (34%), Positives = 35/97 (36%), Gaps = 6/97 (6%)
Frame = -1
Query: 605 GPYGSAHPRACCPVAPG*PGPAWRRRGWRRGRPPRTVPAMTAAAAGQPGTPAPWRVPGRT 426
GP G A P A G PG RG P PA A G G P PG T
Sbjct: 774 GPSGPAGPTG----ARGAPGD--------RGEPGPPGPAGFAGPPGADGQPGAKGEPGDT 821
Query: 425 RAHCPRAPPAGP--PTSPPRP----SRPAQPATQGAA 333
PP GP P PP P P ++GAA
Sbjct: 822 GVKGDAGPP-GPAGPAGPPGPIGNVGAPGPKGSRGAA 857
Score = 32.3 bits (72), Expect = 6.2
Identities = 59/217 (27%), Positives = 74/217 (33%), Gaps = 11/217 (5%)
Frame = +1
Query: 7 AGQDDPVRHPERHPGGGRGGAVHQLGQVPH*GSVCAGGEPLPLGGQQP--VRGPPDTARQ 180
AGQ V P + G G G+ G A GE P G P + GPP + +
Sbjct: 944 AGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGR 1003
Query: 181 LRAPERLLCGHAVRARPAPDASRWPWPAWTR-RCGPAACASTSRQRASSRLSAAPCVAGC 357
+P A +P P R GPA + AP G
Sbjct: 1004 EGSPG---------AEGSPGRDGAPGAKGDRGETGPAG------PPGAPGAPGAPGPVGP 1048
Query: 358 AGRDGRGGLVG--GPAG-----GARGQCARVRPGTRHGAGVPGWPAAAAVMAGTVRGGRP 516
AG++G G G GPAG GARG G R G G + G
Sbjct: 1049 AGKNGDRGETGPAGPAGPIGPAGARGPAGP--QGPRGDKGETGEQGDRGIKGHRGFSG-- 1104
Query: 517 RLQPRLLHAGPGQPGATGQQA-RG*ALPYGPAAGPAA 624
L PG PG+ G+Q G + P GP P +
Sbjct: 1105 ------LQGPPGSPGSPGEQGPSGASGPAGPRGPPGS 1135
>sp|P03181|YHL1_EBV HYPOTHETICAL BHLF1 PROTEIN gi|73912|pir||QQBE3 BHLF1 protein -
human herpesvirus 4 (strain B95-8)
gi|23893591|emb|CAD53473.1| BHLF1 early reading frame
[Human herpesvirus 4]
Length = 660
Score = 53.5 bits (127), Expect = 3e-06
Identities = 69/219 (31%), Positives = 85/219 (38%), Gaps = 17/219 (7%)
Frame = -1
Query: 620 AGPAAGPYGSAHPRAC-----CPVAPG*PG--PAWRRR-GWRRGRPPRTVPAMTAAAAGQ 465
AGP G+A R CP + PG WRRR G +RG PP + G
Sbjct: 250 AGPPPTRSGAAAQRTHRRPPGCPRSARNPGCPRTWRRRSGAQRGHPPPGAGQRPSGPTG- 308
Query: 464 PGTPAPWRVPGRTRAHCPRAPPAGPPTSPPRPSRPAQPATQGAA--LKRELARCRLVDAQ 291
G PA PG A P A P + P P R + PA AA L E RL
Sbjct: 309 -GRPAAPGAPGTPAAPGPGGGAAVPSGATPHPERGSGPADPPAAARLPPERQEPRLPQDL 367
Query: 290 AAGPHRRVQAGQGHLLASGAGRART-----AWPQ--RSLSGARSWRAVSGGPRTGCWPPS 132
AA +R AG SGA RT P+ R+ R+WR SG R PP
Sbjct: 368 AAA--QRCPAGPPP-TRSGAAAQRTHRRPPGCPRSARNPGCPRTWRRRSGAQRG--HPPP 422
Query: 131 GSGSPPAHTDPQCGTCPN*CTAPPRPPPGWRSGCRTGSS 15
G+G P+ P P P PG + +G++
Sbjct: 423 GAGQRPSGPTGGRPAAPGAPGTPAAPGPGGGAAVPSGAT 461
Score = 53.5 bits (127), Expect = 3e-06
Identities = 69/219 (31%), Positives = 85/219 (38%), Gaps = 17/219 (7%)
Frame = -1
Query: 620 AGPAAGPYGSAHPRAC-----CPVAPG*PG--PAWRRR-GWRRGRPPRTVPAMTAAAAGQ 465
AGP G+A R CP + PG WRRR G +RG PP + G
Sbjct: 375 AGPPPTRSGAAAQRTHRRPPGCPRSARNPGCPRTWRRRSGAQRGHPPPGAGQRPSGPTG- 433
Query: 464 PGTPAPWRVPGRTRAHCPRAPPAGPPTSPPRPSRPAQPATQGAA--LKRELARCRLVDAQ 291
G PA PG A P A P + P P R + PA AA L E RL
Sbjct: 434 -GRPAAPGAPGTPAAPGPGGGAAVPSGATPHPERGSGPADPPAAARLPPERQEPRLPQDL 492
Query: 290 AAGPHRRVQAGQGHLLASGAGRART-----AWPQ--RSLSGARSWRAVSGGPRTGCWPPS 132
AA +R AG SGA RT P+ R+ R+WR SG R PP
Sbjct: 493 AAA--QRCPAGPPP-TRSGAAAQRTHRRPPGCPRSARNPGCPRTWRRRSGAQRG--HPPP 547
Query: 131 GSGSPPAHTDPQCGTCPN*CTAPPRPPPGWRSGCRTGSS 15
G+G P+ P P P PG + +G++
Sbjct: 548 GAGQRPSGPTGGRPAAPGAPGTPAAPGPGGGAAVPSGAT 586
Score = 51.2 bits (121), Expect = 1e-05
Identities = 60/191 (31%), Positives = 74/191 (38%), Gaps = 9/191 (4%)
Frame = -1
Query: 560 PG*PGPAWRRRGWRRGRPPRTVPAMTAAAAGQPGTPAPWRVPGRTRAHCPRAPPAGPPTS 381
PG P RR G +RG PP + G G PA PG A P A P +
Sbjct: 153 PGCPRTWRRRSGAQRGHPPPGAGQRPSGPTG--GRPAAPGAPGTPAAPGPGGGAAVPSGA 210
Query: 380 PPRPSRPAQPATQGAA--LKRELARCRLVDAQAAGPHRRVQAGQGHLLASGAGRART--- 216
P P R + PA AA L E RL AA +R AG SGA RT
Sbjct: 211 TPHPERGSGPADPPAAARLPPERQEPRLPQDLAAA--QRCPAGPPP-TRSGAAAQRTHRR 267
Query: 215 --AWPQ--RSLSGARSWRAVSGGPRTGCWPPSGSGSPPAHTDPQCGTCPN*CTAPPRPPP 48
P+ R+ R+WR SG R PP G+G P+ P P P P
Sbjct: 268 PPGCPRSARNPGCPRTWRRRSGAQRG--HPPPGAGQRPSGPTGGRPAAPGAPGTPAAPGP 325
Query: 47 GWRSGCRTGSS 15
G + +G++
Sbjct: 326 GGGAAVPSGAT 336
Score = 45.1 bits (105), Expect = 0.001
Identities = 59/227 (25%), Positives = 77/227 (32%), Gaps = 28/227 (12%)
Frame = -1
Query: 611 AAGPYGSAHPRACCPVAPG*PGPAWRRR--GWRRGRPPRTVPAMTAAAA----------- 471
A GP + P P PG P RR GW + P V AA+
Sbjct: 8 ARGPRTTPLPHCPPPCLPGAPDQQTRRLPPGWGQRTAPTQVGLADAASPDELQDQASGAR 67
Query: 470 -----------GQPGTPAPWRVPGRT----RAHCPRAPPAGPPTSPPRPSRPAQPATQGA 336
G+PGTPAP R RT +A + P G + P R R Q G
Sbjct: 68 PGGGNRVGAGRGRPGTPAPSRQSRRTGPAEQADHAHSNPTGGCSDPQRSPRTRQ---AGY 124
Query: 335 ALKRELARCRLVDAQAAGPHRRVQAGQGHLLASGAGRARTAWPQRSLSGARSWRAVSGGP 156
AL A + ++ PH Q W R+ R+WR SG
Sbjct: 125 ALGEGSAG---LGSRGPRPHPAFQ---------------VQWSARNPGCPRTWRRRSGAQ 166
Query: 155 RTGCWPPSGSGSPPAHTDPQCGTCPN*CTAPPRPPPGWRSGCRTGSS 15
R PP G+G P+ P P P PG + +G++
Sbjct: 167 RG--HPPPGAGQRPSGPTGGRPAAPGAPGTPAAPGPGGGAAVPSGAT 211
Score = 40.4 bits (93), Expect = 0.023
Identities = 50/145 (34%), Positives = 57/145 (38%), Gaps = 10/145 (6%)
Frame = -1
Query: 620 AGPAAGPYGSAHPRAC-----CPVAPG*PG--PAWRRR-GWRRGRPPRTVPAMTAAAAGQ 465
AGP G+A R CP + PG WRRR G +RG PP + G
Sbjct: 500 AGPPPTRSGAAAQRTHRRPPGCPRSARNPGCPRTWRRRSGAQRGHPPPGAGQRPSGPTG- 558
Query: 464 PGTPAPWRVPGRTRAHCPRAPPAGPPTSPPRPSRPAQPATQGAA--LKRELARCRLVDAQ 291
G PA PG A P A P + P P R + PA AA L E RL
Sbjct: 559 -GRPAAPGAPGTPAAPGPGGGAAVPSGATPHPERGSGPADPPAAARLPPERQEPRLPQDL 617
Query: 290 AAGPHRRVQAGQGHLLASGAGRART 216
AA +R AG SGA RT
Sbjct: 618 AAA--QRCPAGPPP-TRSGAAAQRT 639
Score = 37.4 bits (85), Expect = 0.19
Identities = 43/156 (27%), Positives = 54/156 (34%), Gaps = 11/156 (7%)
Frame = +1
Query: 46 PGGGRGGAVHQLGQVPH*GSVCAGGEPLPLGGQQPVRGPPDTARQLRAPERLLCG-HAVR 222
PG G G AV G PH +P P R P + L A +R G R
Sbjct: 448 PGPGGGAAVPS-GATPHPERGSGPADPPAAARLPPERQEPRLPQDLAAAQRCPAGPPPTR 506
Query: 223 ARPAPDASRWPWPAWTRRCGPAACASTSRQRASSRLSAAPCVAG------CAGRDGRGGL 384
+ A + P R C T R+R+ ++ P AG GR G
Sbjct: 507 SGAAAQRTHRRPPGCPRSARNPGCPRTWRRRSGAQRGHPPPGAGQRPSGPTGGRPAAPGA 566
Query: 385 VGGPA----GGARGQCARVRPGTRHGAGVPGWPAAA 480
G PA GG + P G+G PAAA
Sbjct: 567 PGTPAAPGPGGGAAVPSGATPHPERGSGPADPPAAA 602
Score = 37.4 bits (85), Expect = 0.19
Identities = 43/156 (27%), Positives = 54/156 (34%), Gaps = 11/156 (7%)
Frame = +1
Query: 46 PGGGRGGAVHQLGQVPH*GSVCAGGEPLPLGGQQPVRGPPDTARQLRAPERLLCG-HAVR 222
PG G G AV G PH +P P R P + L A +R G R
Sbjct: 323 PGPGGGAAVPS-GATPHPERGSGPADPPAAARLPPERQEPRLPQDLAAAQRCPAGPPPTR 381
Query: 223 ARPAPDASRWPWPAWTRRCGPAACASTSRQRASSRLSAAPCVAG------CAGRDGRGGL 384
+ A + P R C T R+R+ ++ P AG GR G
Sbjct: 382 SGAAAQRTHRRPPGCPRSARNPGCPRTWRRRSGAQRGHPPPGAGQRPSGPTGGRPAAPGA 441
Query: 385 VGGPA----GGARGQCARVRPGTRHGAGVPGWPAAA 480
G PA GG + P G+G PAAA
Sbjct: 442 PGTPAAPGPGGGAAVPSGATPHPERGSGPADPPAAA 477
Score = 37.4 bits (85), Expect = 0.19
Identities = 43/156 (27%), Positives = 54/156 (34%), Gaps = 11/156 (7%)
Frame = +1
Query: 46 PGGGRGGAVHQLGQVPH*GSVCAGGEPLPLGGQQPVRGPPDTARQLRAPERLLCG-HAVR 222
PG G G AV G PH +P P R P + L A +R G R
Sbjct: 198 PGPGGGAAVPS-GATPHPERGSGPADPPAAARLPPERQEPRLPQDLAAAQRCPAGPPPTR 256
Query: 223 ARPAPDASRWPWPAWTRRCGPAACASTSRQRASSRLSAAPCVAG------CAGRDGRGGL 384
+ A + P R C T R+R+ ++ P AG GR G
Sbjct: 257 SGAAAQRTHRRPPGCPRSARNPGCPRTWRRRSGAQRGHPPPGAGQRPSGPTGGRPAAPGA 316
Query: 385 VGGPA----GGARGQCARVRPGTRHGAGVPGWPAAA 480
G PA GG + P G+G PAAA
Sbjct: 317 PGTPAAPGPGGGAAVPSGATPHPERGSGPADPPAAA 352
>sp|P11087|CA11_MOUSE Collagen alpha 1(I) chain precursor gi|7441213|pir||S21626 collagen
alpha 1(I) chain precursor - mouse
gi|470674|gb|AAA88912.1| collagen pro-alpha-1 type I
chain
Length = 1453
Score = 53.1 bits (126), Expect = 3e-06
Identities = 73/233 (31%), Positives = 85/233 (36%), Gaps = 32/233 (13%)
Frame = +1
Query: 34 PERHPGG-GRGGAVHQLGQVPH*GSVCAGGEPLPLGGQQPVRGP----------PDTARQ 180
P PG GR G G + G+V A G P P G P P P AR
Sbjct: 292 PRGLPGERGRPGPPGTAGARGNDGAVGAAGPPGPTGPTGPPGFPGAVGAKGEAGPQGARG 351
Query: 181 LRAPERLLCGHAVRARPAPDASRWPWPAWTRRCGPAACASTSRQRASSRLSAAPCVAGCA 360
P+ VR P P P PA GPA Q + + AP +AG
Sbjct: 352 SEGPQ------GVRGEPGP-----PGPAGA--AGPAGNPGADGQPGAKGANGAPGIAGAP 398
Query: 361 GRDGRGGLVG--GPAG--GARGQCARV-RPGTRHGAGVPGWPAAAAVM-----AGT--VR 504
G G G G GP+G G +G PG + G G P A V AG R
Sbjct: 399 GFPGARGPSGPQGPSGPPGPKGNSGEPGAPGNKGDTGAKGEPGATGVQGPPGPAGEEGKR 458
Query: 505 GGRPRLQPRLLHAGPGQPGATGQQ----ARG*ALPYGP-----AAGPAAKQVS 636
G R P L PG+ G G + A G A P GP A GPA + S
Sbjct: 459 GARGEPGPSGLPGPPGERGGPGSRGFPGADGVAGPKGPSGERGAPGPAGPKGS 511
Score = 39.7 bits (91), Expect = 0.039
Identities = 42/107 (39%), Positives = 48/107 (44%), Gaps = 17/107 (15%)
Frame = +1
Query: 352 GCAGRDGRGGLVG-----GPAG--GARGQC----------ARVRPGTRHGAGVPGWPAAA 480
G G+DG GL G GPAG G +G+ AR PG R AG PG PA
Sbjct: 744 GSPGKDGARGLTGPIGPPGPAGAPGDKGEAGPSGPPGPTGARGAPGDRGEAGPPG-PAGF 802
Query: 481 AVMAGTVRGGRPRLQPRLLHAGPGQPGATGQQARG*ALPYGPAAGPA 621
A G G+P G+PG TG +G A P GP AGPA
Sbjct: 803 AGPPGA--DGQP--------GAKGEPGDTG--VKGDAGPPGP-AGPA 836
Score = 38.9 bits (89), Expect = 0.066
Identities = 41/121 (33%), Positives = 49/121 (39%), Gaps = 8/121 (6%)
Frame = +1
Query: 280 GPAACASTSRQRASSRLSAAPCVAGCAGRDGRGGLVG--GPAGGARGQCARVRPGTRHGA 453
GP A + L P G AG+DG G G GPAG A + G + A
Sbjct: 573 GPKGTAGEPGKAGERGLPGPPGAVGPAGKDGEAGAQGAPGPAGPAGER------GEQGPA 626
Query: 454 GVPGWPAAAAVMAGTVRGGRPRLQ--PRLLHAGPGQPGATGQQA----RG*ALPYGPAAG 615
G PG+ G+P Q P L A PG GA G++ RG P GP AG
Sbjct: 627 GSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGA-PGPSGARGERGFPGERGVQGPPGP-AG 684
Query: 616 P 618
P
Sbjct: 685 P 685
Score = 37.4 bits (85), Expect = 0.19
Identities = 62/227 (27%), Positives = 79/227 (34%), Gaps = 34/227 (14%)
Frame = -1
Query: 623 AAGPAA-----GPYGSAHPRACCPVA--------PG*PGPAWR--RRG-----WRRGRP- 507
A GPA GP G A R + PG PGP+ ++G RG P
Sbjct: 928 ADGPAGSPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGSSGERGPPG 987
Query: 506 PRTVPAMTA--AAAGQPGTPAPWRVPGRTRAHCPRAP-----PAGPPTSPPRPSRPAQPA 348
P P + +G+ G+P PGR A + PAGPP +P P P
Sbjct: 988 PMGPPGLAGPPGESGREGSPGAEGSPGRDGAPGAKGDRGETGPAGPPGAPGAPGAPGPVG 1047
Query: 347 TQGAALKRELARCRLVDAQAAGPHRRVQAGQGHLLASGAGRARTAWPQ-----RSLSGAR 183
G + R A AGP AG A PQ + +G +
Sbjct: 1048 PAG----KNGDRGETGPAGPAGP------------IGPAGARGPAGPQGPRGDKGETGEQ 1091
Query: 182 SWRAVSGGPR-TGCWPPSGSGSPPAHTDPQCGTCPN*CTAPPRPPPG 45
R + G +G P GS P P + P A PR PPG
Sbjct: 1092 GDRGIKGHRGFSGLQGPPGSPGSPGEQGPSGASGP----AGPRGPPG 1134
Score = 35.4 bits (80), Expect = 0.73
Identities = 25/72 (34%), Positives = 28/72 (38%)
Frame = -1
Query: 605 GPYGSAHPRACCPVAPG*PGPAWRRRGWRRGRPPRTVPAMTAAAAGQPGTPAPWRVPGRT 426
GP G+A P PG PGP + G +G T PA G PG P P G
Sbjct: 876 GPSGNAGP-------PGPPGPVGKEGG--KGPRGETGPAGRPGEVGPPGPPGPAGEKGSP 926
Query: 425 RAHCPRAPPAGP 390
A P P P
Sbjct: 927 GADGPAGSPGTP 938
Score = 35.0 bits (79), Expect = 0.95
Identities = 63/237 (26%), Positives = 77/237 (31%), Gaps = 31/237 (13%)
Frame = +1
Query: 10 GQDDPVRHPERHPGGGRGGAVHQLGQVPH*GSVCAGGEPLPLGGQQPVRGPPDTARQL-R 186
G P R G GA Q G + G GEP G++ + GPP +
Sbjct: 543 GPPGPAGQDGRPGPAGPPGARGQAGVMGFPGPKGTAGEP-GKAGERGLPGPPGAVGPAGK 601
Query: 187 APERLLCGHAVRARPA-----------PDASRWPWPAWTRRCGPAACASTSRQRASSRLS 333
E G A PA P P PA GP A ++
Sbjct: 602 DGEAGAQGAPGPAGPAGERGEQGPAGSPGFQGLPGPA-----GPPGEAGKPGEQGVPGDL 656
Query: 334 AAPCVAGCAGRDGRGGLVG-----GPAGGARGQCARVRPGTRHGAGVPGWPAA------- 477
AP +G G G G G GPAG A G + G PG P +
Sbjct: 657 GAPGPSGARGERGFPGERGVQGPPGPAGPRGNNGAPGNDGAKGDTGAPGAPGSQGAPGLQ 716
Query: 478 -------AAVMAGTVRGGRPRLQPRLLHAGPGQPGATGQQARG*ALPYGPAAGPAAK 627
AA + G +G R P+ PG+ GA G G P GPA P K
Sbjct: 717 GMPGERGAAGLPGP-KGDRGDAGPKGADGSPGKDGARG--LTGPIGPPGPAGAPGDK 770
Score = 33.5 bits (75), Expect = 2.8
Identities = 50/180 (27%), Positives = 62/180 (33%), Gaps = 16/180 (8%)
Frame = -1
Query: 608 AGPYGSAHPRACCPVAPG*PGPAWRR-RGWRRGRPPRTVPAMTAAAAGQPGTPAPWRVPG 432
AG G A R P PG GPA + +G P PA G G+P +PG
Sbjct: 578 AGEPGKAGERGL-PGPPGAVGPAGKDGEAGAQGAPGPAGPAGERGEQGPAGSPGFQGLPG 636
Query: 431 RTRAHCPRAPPAGPPTSPPRPSRP------AQPATQGAALKRELARCRLVDAQ--AAGPH 276
PAGPP +P P GA +R R V AGP
Sbjct: 637 ----------PAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPR 686
Query: 275 RRVQA-----GQGHLLASGAGRARTAWPQRSLSGARSWRAVSG--GPRTGCWPPSGSGSP 117
A +G A GA ++ A + + G R + G G R P GSP
Sbjct: 687 GNNGAPGNDGAKGDTGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSP 746
Score = 33.5 bits (75), Expect = 2.8
Identities = 25/82 (30%), Positives = 30/82 (36%), Gaps = 8/82 (9%)
Frame = -1
Query: 557 G*PGPAWRRRGWRRGRPPRTVPAMTAAAAGQPGTPAPWRVPGRTRAHCPRAP-------- 402
G PGPA +RG P+ G+ G P PG P+ P
Sbjct: 447 GPPGPAGEEG--KRGARGEPGPSGLPGPPGERGGPGSRGFPGADGVAGPKGPSGERGAPG 504
Query: 401 PAGPPTSPPRPSRPAQPATQGA 336
PAGP SP RP + GA
Sbjct: 505 PAGPKGSPGEAGRPGEAGLPGA 526
Score = 33.1 bits (74), Expect = 3.6
Identities = 35/118 (29%), Positives = 39/118 (32%), Gaps = 27/118 (22%)
Frame = -1
Query: 611 AAGPYGSAHPRACCPVAPG*PGPAWRR-----RGWR--------RGRPPRTVPAMTAAAA 471
AAGP G P PG PG + +G R RG P PA A A
Sbjct: 319 AAGPPGPTGPTG----PPGFPGAVGAKGEAGPQGARGSEGPQGVRGEPGPPGPAGAAGPA 374
Query: 470 GQP------------GTPAPWRVPGRTRAHCPRAP--PAGPPTSPPRPSRPAQPATQG 339
G P G P PG A P P P+GPP P P +G
Sbjct: 375 GNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPSGPPGPKGNSGEPGAPGNKG 432
Score = 32.7 bits (73), Expect = 4.7
Identities = 29/88 (32%), Positives = 34/88 (37%), Gaps = 2/88 (2%)
Frame = -1
Query: 605 GPYGSAHPRACCPVAPG*PGPAWRRRGWRRGRPPRTVPAMTAAAA--GQPGTPAPWRVPG 432
GP GS P +PG GP+ G PR P + G G P P PG
Sbjct: 1107 GPPGS-------PGSPGEQGPS----GASGPAGPRGPPGSAGSPGKDGLNGLPGPIGPPG 1155
Query: 431 RTRAHCPRAPPAGPPTSPPRPSRPAQPA 348
R + PAGPP P P P P+
Sbjct: 1156 -PRGRTGDSGPAGPPGPPGPPGPPGPPS 1182
>ref|XP_109776.3| similar to Collagen alpha1 [Rattus norvegicus] [Mus musculus]
gi|34328108|ref|NP_031768.2| procollagen, type I, alpha
1 [Mus musculus] gi|29476768|gb|AAH50014.1| Procollagen,
type I, alpha 1 [Mus musculus]
Length = 1453
Score = 53.1 bits (126), Expect = 3e-06
Identities = 73/233 (31%), Positives = 85/233 (36%), Gaps = 32/233 (13%)
Frame = +1
Query: 34 PERHPGG-GRGGAVHQLGQVPH*GSVCAGGEPLPLGGQQPVRGP----------PDTARQ 180
P PG GR G G + G+V A G P P G P P P AR
Sbjct: 292 PRGLPGERGRPGPPGTAGARGNDGAVGAAGPPGPTGPTGPPGFPGAVGAKGEAGPQGARG 351
Query: 181 LRAPERLLCGHAVRARPAPDASRWPWPAWTRRCGPAACASTSRQRASSRLSAAPCVAGCA 360
P+ VR P P P PA GPA Q + + AP +AG
Sbjct: 352 SEGPQ------GVRGEPGP-----PGPAGA--AGPAGNPGADGQPGAKGANGAPGIAGAP 398
Query: 361 GRDGRGGLVG--GPAG--GARGQCARV-RPGTRHGAGVPGWPAAAAVM-----AGT--VR 504
G G G G GP+G G +G PG + G G P A V AG R
Sbjct: 399 GFPGARGPSGPQGPSGPPGPKGNSGEPGAPGNKGDTGAKGEPGATGVQGPPGPAGEEGKR 458
Query: 505 GGRPRLQPRLLHAGPGQPGATGQQ----ARG*ALPYGP-----AAGPAAKQVS 636
G R P L PG+ G G + A G A P GP A GPA + S
Sbjct: 459 GARGEPGPSGLPGPPGERGGPGSRGFPGADGVAGPKGPSGERGAPGPAGPKGS 511
Score = 39.7 bits (91), Expect = 0.039
Identities = 42/107 (39%), Positives = 48/107 (44%), Gaps = 17/107 (15%)
Frame = +1
Query: 352 GCAGRDGRGGLVG-----GPAG--GARGQC----------ARVRPGTRHGAGVPGWPAAA 480
G G+DG GL G GPAG G +G+ AR PG R AG PG PA
Sbjct: 744 GSPGKDGARGLTGPIGPPGPAGAPGDKGEAGPSGPPGPTGARGAPGDRGEAGPPG-PAGF 802
Query: 481 AVMAGTVRGGRPRLQPRLLHAGPGQPGATGQQARG*ALPYGPAAGPA 621
A G G+P G+PG TG +G A P GP AGPA
Sbjct: 803 AGPPGA--DGQP--------GAKGEPGDTG--VKGDAGPPGP-AGPA 836
Score = 38.9 bits (89), Expect = 0.066
Identities = 41/121 (33%), Positives = 49/121 (39%), Gaps = 8/121 (6%)
Frame = +1
Query: 280 GPAACASTSRQRASSRLSAAPCVAGCAGRDGRGGLVG--GPAGGARGQCARVRPGTRHGA 453
GP A + L P G AG+DG G G GPAG A + G + A
Sbjct: 573 GPKGTAGEPGKAGERGLPGPPGAVGPAGKDGEAGAQGAPGPAGPAGER------GEQGPA 626
Query: 454 GVPGWPAAAAVMAGTVRGGRPRLQ--PRLLHAGPGQPGATGQQA----RG*ALPYGPAAG 615
G PG+ G+P Q P L A PG GA G++ RG P GP AG
Sbjct: 627 GSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGA-PGPSGARGERGFPGERGVQGPPGP-AG 684
Query: 616 P 618
P
Sbjct: 685 P 685
Score = 37.4 bits (85), Expect = 0.19
Identities = 62/227 (27%), Positives = 79/227 (34%), Gaps = 34/227 (14%)
Frame = -1
Query: 623 AAGPAA-----GPYGSAHPRACCPVA--------PG*PGPAWR--RRG-----WRRGRP- 507
A GPA GP G A R + PG PGP+ ++G RG P
Sbjct: 928 ADGPAGSPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGSSGERGPPG 987
Query: 506 PRTVPAMTA--AAAGQPGTPAPWRVPGRTRAHCPRAP-----PAGPPTSPPRPSRPAQPA 348
P P + +G+ G+P PGR A + PAGPP +P P P
Sbjct: 988 PMGPPGLAGPPGESGREGSPGAEGSPGRDGAPGAKGDRGETGPAGPPGAPGAPGAPGPVG 1047
Query: 347 TQGAALKRELARCRLVDAQAAGPHRRVQAGQGHLLASGAGRARTAWPQ-----RSLSGAR 183
G + R A AGP AG A PQ + +G +
Sbjct: 1048 PAG----KNGDRGETGPAGPAGP------------IGPAGARGPAGPQGPRGDKGETGEQ 1091
Query: 182 SWRAVSGGPR-TGCWPPSGSGSPPAHTDPQCGTCPN*CTAPPRPPPG 45
R + G +G P GS P P + P A PR PPG
Sbjct: 1092 GDRGIKGHRGFSGLQGPPGSPGSPGEQGPSGASGP----AGPRGPPG 1134
Score = 35.4 bits (80), Expect = 0.73
Identities = 25/72 (34%), Positives = 28/72 (38%)
Frame = -1
Query: 605 GPYGSAHPRACCPVAPG*PGPAWRRRGWRRGRPPRTVPAMTAAAAGQPGTPAPWRVPGRT 426
GP G+A P PG PGP + G +G T PA G PG P P G
Sbjct: 876 GPSGNAGP-------PGPPGPVGKEGG--KGPRGETGPAGRPGEVGPPGPPGPAGEKGSP 926
Query: 425 RAHCPRAPPAGP 390
A P P P
Sbjct: 927 GADGPAGSPGTP 938
Score = 35.0 bits (79), Expect = 0.95
Identities = 63/237 (26%), Positives = 77/237 (31%), Gaps = 31/237 (13%)
Frame = +1
Query: 10 GQDDPVRHPERHPGGGRGGAVHQLGQVPH*GSVCAGGEPLPLGGQQPVRGPPDTARQL-R 186
G P R G GA Q G + G GEP G++ + GPP +
Sbjct: 543 GPPGPAGQDGRPGPAGPPGARGQAGVMGFPGPKGTAGEP-GKAGERGLPGPPGAVGPAGK 601
Query: 187 APERLLCGHAVRARPA-----------PDASRWPWPAWTRRCGPAACASTSRQRASSRLS 333
E G A PA P P PA GP A ++
Sbjct: 602 DGEAGAQGAPGPAGPAGERGEQGPAGSPGFQGLPGPA-----GPPGEAGKPGEQGVPGDL 656
Query: 334 AAPCVAGCAGRDGRGGLVG-----GPAGGARGQCARVRPGTRHGAGVPGWPAA------- 477
AP +G G G G G GPAG A G + G PG P +
Sbjct: 657 GAPGPSGARGERGFPGERGVQGPPGPAGPRGNNGAPGNDGAKGDTGAPGAPGSQGAPGLQ 716
Query: 478 -------AAVMAGTVRGGRPRLQPRLLHAGPGQPGATGQQARG*ALPYGPAAGPAAK 627
AA + G +G R P+ PG+ GA G G P GPA P K
Sbjct: 717 GMPGERGAAGLPGP-KGDRGDAGPKGADGSPGKDGARG--LTGPIGPPGPAGAPGDK 770
Score = 33.5 bits (75), Expect = 2.8
Identities = 50/180 (27%), Positives = 62/180 (33%), Gaps = 16/180 (8%)
Frame = -1
Query: 608 AGPYGSAHPRACCPVAPG*PGPAWRR-RGWRRGRPPRTVPAMTAAAAGQPGTPAPWRVPG 432
AG G A R P PG GPA + +G P PA G G+P +PG
Sbjct: 578 AGEPGKAGERGL-PGPPGAVGPAGKDGEAGAQGAPGPAGPAGERGEQGPAGSPGFQGLPG 636
Query: 431 RTRAHCPRAPPAGPPTSPPRPSRP------AQPATQGAALKRELARCRLVDAQ--AAGPH 276
PAGPP +P P GA +R R V AGP
Sbjct: 637 ----------PAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPR 686
Query: 275 RRVQA-----GQGHLLASGAGRARTAWPQRSLSGARSWRAVSG--GPRTGCWPPSGSGSP 117
A +G A GA ++ A + + G R + G G R P GSP
Sbjct: 687 GNNGAPGNDGAKGDTGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSP 746
Score = 33.5 bits (75), Expect = 2.8
Identities = 25/82 (30%), Positives = 30/82 (36%), Gaps = 8/82 (9%)
Frame = -1
Query: 557 G*PGPAWRRRGWRRGRPPRTVPAMTAAAAGQPGTPAPWRVPGRTRAHCPRAP-------- 402
G PGPA +RG P+ G+ G P PG P+ P
Sbjct: 447 GPPGPAGEEG--KRGARGEPGPSGLPGPPGERGGPGSRGFPGADGVAGPKGPSGERGAPG 504
Query: 401 PAGPPTSPPRPSRPAQPATQGA 336
PAGP SP RP + GA
Sbjct: 505 PAGPKGSPGEAGRPGEAGLPGA 526
Score = 33.1 bits (74), Expect = 3.6
Identities = 35/118 (29%), Positives = 39/118 (32%), Gaps = 27/118 (22%)
Frame = -1
Query: 611 AAGPYGSAHPRACCPVAPG*PGPAWRR-----RGWR--------RGRPPRTVPAMTAAAA 471
AAGP G P PG PG + +G R RG P PA A A
Sbjct: 319 AAGPPGPTGPTG----PPGFPGAVGAKGEAGPQGARGSEGPQGVRGEPGPPGPAGAAGPA 374
Query: 470 GQP------------GTPAPWRVPGRTRAHCPRAP--PAGPPTSPPRPSRPAQPATQG 339
G P G P PG A P P P+GPP P P +G
Sbjct: 375 GNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPSGPPGPKGNSGEPGAPGNKG 432
Score = 32.7 bits (73), Expect = 4.7
Identities = 29/88 (32%), Positives = 34/88 (37%), Gaps = 2/88 (2%)
Frame = -1
Query: 605 GPYGSAHPRACCPVAPG*PGPAWRRRGWRRGRPPRTVPAMTAAAA--GQPGTPAPWRVPG 432
GP GS P +PG GP+ G PR P + G G P P PG
Sbjct: 1107 GPPGS-------PGSPGEQGPS----GASGPAGPRGPPGSAGSPGKDGLNGLPGPIGPPG 1155
Query: 431 RTRAHCPRAPPAGPPTSPPRPSRPAQPA 348
R + PAGPP P P P P+
Sbjct: 1156 -PRGRTGDSGPAGPPGPPGPPGPPGPPS 1182
>gb|AAH59281.1| Unknown (protein for MGC:68307) [Mus musculus]
Length = 1225
Score = 53.1 bits (126), Expect = 3e-06
Identities = 73/233 (31%), Positives = 85/233 (36%), Gaps = 32/233 (13%)
Frame = +1
Query: 34 PERHPGG-GRGGAVHQLGQVPH*GSVCAGGEPLPLGGQQPVRGP----------PDTARQ 180
P PG GR G G + G+V A G P P G P P P AR
Sbjct: 292 PRGLPGERGRPGPPGTAGARGNDGAVGAAGPPGPTGPTGPPGFPGAVGAKGEAGPQGARG 351
Query: 181 LRAPERLLCGHAVRARPAPDASRWPWPAWTRRCGPAACASTSRQRASSRLSAAPCVAGCA 360
P+ VR P P P PA GPA Q + + AP +AG
Sbjct: 352 SEGPQ------GVRGEPGP-----PGPAGA--AGPAGNPGADGQPGAKGANGAPGIAGAP 398
Query: 361 GRDGRGGLVG--GPAG--GARGQCARV-RPGTRHGAGVPGWPAAAAVM-----AGT--VR 504
G G G G GP+G G +G PG + G G P A V AG R
Sbjct: 399 GFPGARGPSGPQGPSGPPGPKGNSGEPGAPGNKGDTGAKGEPGATGVQGPPGPAGEEGKR 458
Query: 505 GGRPRLQPRLLHAGPGQPGATGQQ----ARG*ALPYGP-----AAGPAAKQVS 636
G R P L PG+ G G + A G A P GP A GPA + S
Sbjct: 459 GARGEPGPSGLPGPPGERGGPGSRGFPGADGVAGPKGPSGERGAPGPAGPKGS 511
Score = 38.9 bits (89), Expect = 0.066
Identities = 41/121 (33%), Positives = 49/121 (39%), Gaps = 8/121 (6%)
Frame = +1
Query: 280 GPAACASTSRQRASSRLSAAPCVAGCAGRDGRGGLVG--GPAGGARGQCARVRPGTRHGA 453
GP A + L P G AG+DG G G GPAG A + G + A
Sbjct: 573 GPKGTAGEPGKAGERGLPGPPGAVGPAGKDGEAGAQGAPGPAGPAGER------GEQGPA 626
Query: 454 GVPGWPAAAAVMAGTVRGGRPRLQ--PRLLHAGPGQPGATGQQA----RG*ALPYGPAAG 615
G PG+ G+P Q P L A PG GA G++ RG P GP AG
Sbjct: 627 GSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGA-PGPSGARGERGFPGERGVQGPPGP-AG 684
Query: 616 P 618
P
Sbjct: 685 P 685
Score = 36.6 bits (83), Expect = 0.33
Identities = 44/113 (38%), Positives = 48/113 (41%), Gaps = 20/113 (17%)
Frame = +1
Query: 352 GCAGRDGRGGLVG-----GPAG--GARGQC----------ARVRPGTRHGAGVPGWPAAA 480
G G+DG GL G GPAG G +G+ AR PG R AG PG PA
Sbjct: 744 GSPGKDGARGLTGPIGPPGPAGAPGDKGEAGPSGPPGPTGARGAPGDRGEAGPPG-PAGF 802
Query: 481 AVMAGTVRGGRPRLQPRLLHAGP-GQPGATGQQARG*ALPYGPAA--GPAAKQ 630
A G G P + AG G G TG G A P GPA GPA Q
Sbjct: 803 AGPPGA--PGAPGAPGPVGPAGKNGDRGETG--PAGPAGPIGPAGARGPAGPQ 851
Score = 35.0 bits (79), Expect = 0.95
Identities = 63/237 (26%), Positives = 77/237 (31%), Gaps = 31/237 (13%)
Frame = +1
Query: 10 GQDDPVRHPERHPGGGRGGAVHQLGQVPH*GSVCAGGEPLPLGGQQPVRGPPDTARQL-R 186
G P R G GA Q G + G GEP G++ + GPP +
Sbjct: 543 GPPGPAGQDGRPGPAGPPGARGQAGVMGFPGPKGTAGEP-GKAGERGLPGPPGAVGPAGK 601
Query: 187 APERLLCGHAVRARPA-----------PDASRWPWPAWTRRCGPAACASTSRQRASSRLS 333
E G A PA P P PA GP A ++
Sbjct: 602 DGEAGAQGAPGPAGPAGERGEQGPAGSPGFQGLPGPA-----GPPGEAGKPGEQGVPGDL 656
Query: 334 AAPCVAGCAGRDGRGGLVG-----GPAGGARGQCARVRPGTRHGAGVPGWPAA------- 477
AP +G G G G G GPAG A G + G PG P +
Sbjct: 657 GAPGPSGARGERGFPGERGVQGPPGPAGPRGNNGAPGNDGAKGDTGAPGAPGSQGAPGLQ 716
Query: 478 -------AAVMAGTVRGGRPRLQPRLLHAGPGQPGATGQQARG*ALPYGPAAGPAAK 627
AA + G +G R P+ PG+ GA G G P GPA P K
Sbjct: 717 GMPGERGAAGLPGP-KGDRGDAGPKGADGSPGKDGARG--LTGPIGPPGPAGAPGDK 770
Score = 33.9 bits (76), Expect = 2.1
Identities = 40/140 (28%), Positives = 50/140 (35%), Gaps = 8/140 (5%)
Frame = +1
Query: 229 PAPDASRWPWPAWTRRCGPAACASTSRQRASSRLSAAPCVAGCAGRDGRGGLVG--GPAG 402
P P +R P GP A + + AP G AG++G G G GPAG
Sbjct: 779 PGPTGARGA-PGDRGEAGPPGPAGFAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAG 837
Query: 403 -----GARGQCARVRPGTRHGAGVPGWPAAAAVMAGTVRGGRPRLQPRLLHAGPGQPGAT 567
GARG G R G G + G L PG PG+
Sbjct: 838 PIGPAGARGPAGP--QGPRGDKGETGEQGDRGIKGHRGFSG--------LQGPPGSPGSP 887
Query: 568 GQQA-RG*ALPYGPAAGPAA 624
G+Q G + P GP P +
Sbjct: 888 GEQGPSGASGPAGPRGPPGS 907
Score = 33.5 bits (75), Expect = 2.8
Identities = 50/180 (27%), Positives = 62/180 (33%), Gaps = 16/180 (8%)
Frame = -1
Query: 608 AGPYGSAHPRACCPVAPG*PGPAWRR-RGWRRGRPPRTVPAMTAAAAGQPGTPAPWRVPG 432
AG G A R P PG GPA + +G P PA G G+P +PG
Sbjct: 578 AGEPGKAGERGL-PGPPGAVGPAGKDGEAGAQGAPGPAGPAGERGEQGPAGSPGFQGLPG 636
Query: 431 RTRAHCPRAPPAGPPTSPPRPSRP------AQPATQGAALKRELARCRLVDAQ--AAGPH 276
PAGPP +P P GA +R R V AGP
Sbjct: 637 ----------PAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPR 686
Query: 275 RRVQA-----GQGHLLASGAGRARTAWPQRSLSGARSWRAVSG--GPRTGCWPPSGSGSP 117
A +G A GA ++ A + + G R + G G R P GSP
Sbjct: 687 GNNGAPGNDGAKGDTGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSP 746
Score = 33.5 bits (75), Expect = 2.8
Identities = 25/82 (30%), Positives = 30/82 (36%), Gaps = 8/82 (9%)
Frame = -1
Query: 557 G*PGPAWRRRGWRRGRPPRTVPAMTAAAAGQPGTPAPWRVPGRTRAHCPRAP-------- 402
G PGPA +RG P+ G+ G P PG P+ P
Sbjct: 447 GPPGPAGEEG--KRGARGEPGPSGLPGPPGERGGPGSRGFPGADGVAGPKGPSGERGAPG 504
Query: 401 PAGPPTSPPRPSRPAQPATQGA 336
PAGP SP RP + GA
Sbjct: 505 PAGPKGSPGEAGRPGEAGLPGA 526
Score = 33.1 bits (74), Expect = 3.6
Identities = 35/118 (29%), Positives = 39/118 (32%), Gaps = 27/118 (22%)
Frame = -1
Query: 611 AAGPYGSAHPRACCPVAPG*PGPAWRR-----RGWR--------RGRPPRTVPAMTAAAA 471
AAGP G P PG PG + +G R RG P PA A A
Sbjct: 319 AAGPPGPTGPTG----PPGFPGAVGAKGEAGPQGARGSEGPQGVRGEPGPPGPAGAAGPA 374
Query: 470 GQP------------GTPAPWRVPGRTRAHCPRAP--PAGPPTSPPRPSRPAQPATQG 339
G P G P PG A P P P+GPP P P +G
Sbjct: 375 GNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPSGPPGPKGNSGEPGAPGNKG 432
Score = 32.7 bits (73), Expect = 4.7
Identities = 29/88 (32%), Positives = 34/88 (37%), Gaps = 2/88 (2%)
Frame = -1
Query: 605 GPYGSAHPRACCPVAPG*PGPAWRRRGWRRGRPPRTVPAMTAAAA--GQPGTPAPWRVPG 432
GP GS P +PG GP+ G PR P + G G P P PG
Sbjct: 879 GPPGS-------PGSPGEQGPS----GASGPAGPRGPPGSAGSPGKDGLNGLPGPIGPPG 927
Query: 431 RTRAHCPRAPPAGPPTSPPRPSRPAQPA 348
R + PAGPP P P P P+
Sbjct: 928 -PRGRTGDSGPAGPPGPPGPPGPPGPPS 954
